data_UL6 # _chem_comp.id UL6 _chem_comp.name "[(2S)-1,4-dioxan-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H23 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-14 _chem_comp.pdbx_modified_date 2023-05-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.324 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UL6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GF1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UL6 C1 C1 C 0 1 N N N 28.656 62.300 -14.031 -0.675 4.187 -0.471 C1 UL6 1 UL6 C2 C2 C 0 1 N N N 29.598 63.344 -14.524 -0.080 2.944 0.139 C2 UL6 2 UL6 O1 O1 O 0 1 N N N 29.400 64.531 -14.315 -0.537 2.495 1.168 O1 UL6 3 UL6 N1 N1 N 0 1 N N N 30.707 62.928 -15.166 0.960 2.331 -0.460 N1 UL6 4 UL6 C3 C3 C 0 1 N N R 31.818 63.752 -15.622 1.539 1.123 0.133 C3 UL6 5 UL6 C4 C4 C 0 1 N N R 32.072 63.531 -17.111 2.994 0.976 -0.321 C4 UL6 6 UL6 O2 O2 O 0 1 N N N 30.912 63.837 -17.911 3.760 2.081 0.163 O2 UL6 7 UL6 C5 C5 C 0 1 N N S 33.310 64.322 -17.565 3.564 -0.330 0.241 C5 UL6 8 UL6 O3 O3 O 0 1 N N N 33.640 64.021 -18.912 4.898 -0.513 -0.235 O3 UL6 9 UL6 C6 C6 C 0 1 N N R 34.535 63.993 -16.697 2.691 -1.499 -0.220 C6 UL6 10 UL6 C7 C7 C 0 1 N N N 35.716 64.840 -17.031 3.218 -2.801 0.387 C7 UL6 11 UL6 O4 O4 O 0 1 N N N 36.843 64.498 -16.240 2.476 -3.905 -0.135 O4 UL6 12 UL6 O5 O5 O 0 1 N N N 34.200 64.315 -15.337 1.344 -1.285 0.208 O5 UL6 13 UL6 C8 C8 C 0 1 N N R 33.138 63.502 -14.843 0.743 -0.103 -0.325 C8 UL6 14 UL6 O6 O6 O 0 1 N N N 32.980 63.794 -13.481 -0.603 0.000 0.144 O6 UL6 15 UL6 C9 C9 C 0 1 N N N 33.984 63.150 -12.594 -1.462 -1.041 -0.324 C9 UL6 16 UL6 C10 C10 C 0 1 N N S 33.308 62.197 -11.619 -2.870 -0.830 0.237 C10 UL6 17 UL6 C11 C11 C 0 1 N N N 33.959 60.877 -11.379 -3.761 -2.011 -0.161 C11 UL6 18 UL6 O7 O7 O 0 1 N N N 33.297 60.204 -10.306 -5.101 -1.754 0.271 O7 UL6 19 UL6 C12 C12 C 0 1 N N N 31.886 60.026 -10.557 -5.654 -0.547 -0.264 C12 UL6 20 UL6 C13 C13 C 0 1 N N N 31.201 61.290 -10.985 -4.762 0.633 0.133 C13 UL6 21 UL6 O8 O8 O 0 1 N N N 31.945 61.935 -12.017 -3.423 0.376 -0.298 O8 UL6 22 UL6 H1 H1 H 0 1 N N N 27.826 62.780 -13.492 -1.500 4.537 0.149 H1 UL6 23 UL6 H2 H2 H 0 1 N N N 28.259 61.732 -14.885 0.088 4.963 -0.532 H2 UL6 24 UL6 H3 H3 H 0 1 N N N 29.188 61.617 -13.352 -1.043 3.960 -1.472 H3 UL6 25 UL6 H4 H4 H 0 1 N N N 30.775 61.947 -15.349 1.326 2.690 -1.284 H4 UL6 26 UL6 H5 H5 H 0 1 N N N 31.550 64.810 -15.482 1.501 1.196 1.220 H5 UL6 27 UL6 H6 H6 H 0 1 N N N 32.307 62.465 -17.244 3.036 0.953 -1.410 H6 UL6 28 UL6 H7 H7 H 0 1 N N N 30.170 63.331 -17.601 4.693 2.053 -0.088 H7 UL6 29 UL6 H8 H8 H 0 1 N N N 33.092 65.395 -17.463 3.568 -0.286 1.331 H8 UL6 30 UL6 H9 H9 H 0 1 N N N 34.406 64.520 -19.170 5.322 -1.323 0.082 H9 UL6 31 UL6 H10 H10 H 0 1 N N N 34.788 62.927 -16.801 2.719 -1.567 -1.308 H10 UL6 32 UL6 H11 H11 H 0 1 N N N 35.968 64.699 -18.092 4.272 -2.919 0.134 H11 UL6 33 UL6 H12 H12 H 0 1 N N N 35.461 65.895 -16.852 3.106 -2.768 1.470 H12 UL6 34 UL6 H13 H13 H 0 1 N N N 37.576 65.054 -16.476 2.757 -4.765 0.207 H13 UL6 35 UL6 H14 H14 H 0 1 N N N 33.403 62.442 -14.966 0.747 -0.153 -1.413 H14 UL6 36 UL6 H15 H15 H 0 1 N N N 34.702 62.588 -13.209 -1.498 -1.020 -1.413 H15 UL6 37 UL6 H16 H16 H 0 1 N N N 34.517 63.928 -12.028 -1.079 -2.006 0.008 H16 UL6 38 UL6 H17 H17 H 0 1 N N N 33.273 62.716 -10.650 -2.823 -0.760 1.323 H17 UL6 39 UL6 H18 H18 H 0 1 N N N 33.893 60.265 -12.291 -3.744 -2.131 -1.244 H18 UL6 40 UL6 H19 H19 H 0 1 N N N 35.016 61.032 -11.117 -3.394 -2.921 0.313 H19 UL6 41 UL6 H20 H20 H 0 1 N N N 31.409 59.664 -9.634 -5.700 -0.618 -1.351 H20 UL6 42 UL6 H21 H21 H 0 1 N N N 31.764 59.275 -11.351 -6.657 -0.398 0.134 H21 UL6 43 UL6 H22 H22 H 0 1 N N N 31.117 61.967 -10.122 -5.130 1.543 -0.341 H22 UL6 44 UL6 H23 H23 H 0 1 N N N 30.196 61.048 -11.360 -4.780 0.754 1.217 H23 UL6 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UL6 O3 C5 SING N N 1 UL6 O2 C4 SING N N 2 UL6 C5 C4 SING N N 3 UL6 C5 C6 SING N N 4 UL6 C4 C3 SING N N 5 UL6 C7 C6 SING N N 6 UL6 C7 O4 SING N N 7 UL6 C6 O5 SING N N 8 UL6 C3 N1 SING N N 9 UL6 C3 C8 SING N N 10 UL6 O5 C8 SING N N 11 UL6 N1 C2 SING N N 12 UL6 C8 O6 SING N N 13 UL6 C2 O1 DOUB N N 14 UL6 C2 C1 SING N N 15 UL6 O6 C9 SING N N 16 UL6 C9 C10 SING N N 17 UL6 O8 C10 SING N N 18 UL6 O8 C13 SING N N 19 UL6 C10 C11 SING N N 20 UL6 C11 O7 SING N N 21 UL6 C13 C12 SING N N 22 UL6 C12 O7 SING N N 23 UL6 C1 H1 SING N N 24 UL6 C1 H2 SING N N 25 UL6 C1 H3 SING N N 26 UL6 N1 H4 SING N N 27 UL6 C3 H5 SING N N 28 UL6 C4 H6 SING N N 29 UL6 O2 H7 SING N N 30 UL6 C5 H8 SING N N 31 UL6 O3 H9 SING N N 32 UL6 C6 H10 SING N N 33 UL6 C7 H11 SING N N 34 UL6 C7 H12 SING N N 35 UL6 O4 H13 SING N N 36 UL6 C8 H14 SING N N 37 UL6 C9 H15 SING N N 38 UL6 C9 H16 SING N N 39 UL6 C10 H17 SING N N 40 UL6 C11 H18 SING N N 41 UL6 C11 H19 SING N N 42 UL6 C12 H20 SING N N 43 UL6 C12 H21 SING N N 44 UL6 C13 H22 SING N N 45 UL6 C13 H23 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UL6 SMILES ACDLabs 12.01 "CC(=O)NC1C(O)C(O)C(CO)OC1OCC1COCCO1" UL6 InChI InChI 1.06 "InChI=1S/C13H23NO8/c1-7(16)14-10-12(18)11(17)9(4-15)22-13(10)21-6-8-5-19-2-3-20-8/h8-13,15,17-18H,2-6H2,1H3,(H,14,16)/t8-,9+,10+,11+,12+,13+/m0/s1" UL6 InChIKey InChI 1.06 WYEPHXYJGRPYCT-ZRFFIENRSA-N UL6 SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC[C@@H]2COCCO2" UL6 SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC[CH]2COCCO2" UL6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC[C@@H]2COCCO2)CO)O)O" UL6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OCC2COCCO2)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UL6 "SYSTEMATIC NAME" ACDLabs 12.01 "[(2S)-1,4-dioxan-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" UL6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-2-[[(2~{S})-1,4-dioxan-2-yl]methoxy]-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UL6 "Create component" 2023-03-14 RCSB UL6 "Initial release" 2023-05-24 RCSB #