data_V1A # _chem_comp.id V1A _chem_comp.name "S-(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-imidazol-4-yl) methanesulfonothioate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H15 N2 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-11-09 _chem_comp.pdbx_modified_date 2012-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 251.346 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V1A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3K2R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V1A N1 N1 N 0 1 N N N -35.281 11.869 19.575 -2.479 -0.038 -0.535 N1 V1A 1 V1A O1 O1 O 0 1 N N N -35.049 13.132 19.873 -3.768 -0.119 0.153 O1 V1A 2 V1A C2 C2 C 0 1 N N N -36.018 11.455 18.399 -1.562 -1.110 -0.073 C2 V1A 3 V1A C3 C3 C 0 1 N N N -36.009 9.956 18.644 -0.195 -0.463 -0.071 C3 V1A 4 V1A S3 S3 S 0 1 N N N -36.945 8.832 17.567 1.340 -1.327 -0.016 S3 V1A 5 V1A N4 N4 N 0 1 N N N -35.274 9.526 19.803 -0.328 0.822 -0.115 N4 V1A 6 V1A C5 C5 C 0 1 N N N -34.738 10.830 20.440 -1.747 1.192 -0.149 C5 V1A 7 V1A C6 C6 C 0 1 N N N -35.353 11.037 21.843 -2.203 1.666 1.232 C6 V1A 8 V1A C7 C7 C 0 1 N N N -33.202 10.814 20.525 -1.981 2.292 -1.188 C7 V1A 9 V1A C8 C8 C 0 1 N N N -35.227 11.780 17.103 -1.592 -2.292 -1.043 C8 V1A 10 V1A C9 C9 C 0 1 N N N -37.431 12.036 18.357 -1.940 -1.565 1.338 C9 V1A 11 V1A H6 H6 H 0 1 N N N -34.967 10.269 22.530 -1.902 0.936 1.984 H6 V1A 12 V1A H7 H7 H 0 1 N N N -35.082 12.035 22.219 -1.742 2.628 1.456 H7 V1A 13 V1A H8 H8 H 0 1 N N N -36.448 10.955 21.779 -3.287 1.771 1.241 H8 V1A 14 V1A H9 H9 H 0 1 N N N -32.880 10.003 21.195 -3.046 2.514 -1.249 H9 V1A 15 V1A H10 H10 H 0 1 N N N -32.781 10.650 19.522 -1.439 3.190 -0.894 H10 V1A 16 V1A H11 H11 H 0 1 N N N -32.847 11.778 20.918 -1.624 1.954 -2.161 H11 V1A 17 V1A H12 H12 H 0 1 N N N -34.218 11.347 17.170 -0.869 -3.043 -0.724 H12 V1A 18 V1A H13 H13 H 0 1 N N N -35.752 11.353 16.236 -2.590 -2.730 -1.052 H13 V1A 19 V1A H14 H14 H 0 1 N N N -35.150 12.871 16.984 -1.338 -1.947 -2.045 H14 V1A 20 V1A H15 H15 H 0 1 N N N -37.959 11.786 19.289 -1.854 -0.724 2.026 H15 V1A 21 V1A H16 H16 H 0 1 N N N -37.375 13.129 18.250 -2.967 -1.931 1.339 H16 V1A 22 V1A H17 H17 H 0 1 N N N -37.977 11.611 17.502 -1.269 -2.364 1.654 H17 V1A 23 V1A S1 S1 S 0 1 N Y N ? ? ? 2.647 0.265 -0.045 S1 V1A 24 V1A O3 O3 O 0 1 N Y N ? ? ? 2.083 1.164 -0.990 O3 V1A 25 V1A C10 C10 C 0 1 N Y N ? ? ? 2.554 0.958 1.628 C10 V1A 26 V1A O2 O2 O 0 1 N Y N ? ? ? 3.919 -0.329 -0.269 O2 V1A 27 V1A H1 H1 H 0 1 N Y N ? ? ? 2.852 0.200 2.353 H1 V1A 28 V1A H2 H2 H 0 1 N Y N ? ? ? 3.223 1.816 1.704 H2 V1A 29 V1A H3 H3 H 0 1 N Y N ? ? ? 1.532 1.275 1.834 H3 V1A 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V1A C8 C2 SING N N 1 V1A S3 C3 SING N N 2 V1A C9 C2 SING N N 3 V1A C2 C3 SING N N 4 V1A C2 N1 SING N N 5 V1A C3 N4 DOUB N N 6 V1A N1 O1 SING N N 7 V1A N1 C5 SING N N 8 V1A N4 C5 SING N N 9 V1A C5 C7 SING N N 10 V1A C5 C6 SING N N 11 V1A C6 H6 SING N N 12 V1A C6 H7 SING N N 13 V1A C6 H8 SING N N 14 V1A C7 H9 SING N N 15 V1A C7 H10 SING N N 16 V1A C7 H11 SING N N 17 V1A C8 H12 SING N N 18 V1A C8 H13 SING N N 19 V1A C8 H14 SING N N 20 V1A C9 H15 SING N N 21 V1A C9 H16 SING N N 22 V1A C9 H17 SING N N 23 V1A S3 S1 SING N N 24 V1A S1 O3 DOUB N N 25 V1A S1 C10 SING N N 26 V1A S1 O2 DOUB N N 27 V1A C10 H1 SING N N 28 V1A C10 H2 SING N N 29 V1A C10 H3 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V1A SMILES ACDLabs 12.01 "ON1C(C(SS(=O)(=O)C)=NC1(C)C)(C)C" V1A InChI InChI 1.03 "InChI=1S/C8H16N2O3S2/c1-7(2)6(14-15(5,12)13)9-8(3,4)10(7)11/h11H,1-5H3" V1A InChIKey InChI 1.03 GGUBULNJTWFONN-UHFFFAOYSA-N V1A SMILES_CANONICAL CACTVS 3.370 "CC1(C)N=C(S[S](C)(=O)=O)C(C)(C)N1[O]" V1A SMILES CACTVS 3.370 "CC1(C)N=C(S[S](C)(=O)=O)C(C)(C)N1[O]" V1A SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1(C(=NC(N1[O])(C)C)SS(=O)(=O)C)C" V1A SMILES "OpenEye OEToolkits" 1.7.6 "CC1(C(=NC(N1[O])(C)C)SS(=O)(=O)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V1A "SYSTEMATIC NAME" ACDLabs 12.01 "S-(1-hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-imidazol-4-yl) methanesulfonothioate" V1A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-$l^{1}-oxidanyl-2,2,5,5-tetramethyl-4-methylsulfonylsulfanyl-imidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V1A "Create component" 2009-11-09 RCSB V1A "Modify descriptor" 2011-06-04 RCSB V1A "Other modification" 2012-02-21 RCSB #