data_V1D # _chem_comp.id V1D _chem_comp.name "N-[(1S)-1-[4-(2-fluorophenyl)-1H-imidazol-2-yl]-7,7-dihydroxy-7-(1,2-oxazol-3-yl)heptyl]-1-methylazetidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H30 F N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-12 _chem_comp.pdbx_modified_date 2020-07-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 471.525 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V1D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XDM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V1D F F1 F 0 1 N N N 74.025 38.438 2.417 3.328 3.728 -0.449 F V1D 1 V1D C23 C1 C 0 1 Y N N 74.375 37.578 3.400 4.587 3.569 0.013 C23 V1D 2 V1D C22 C2 C 0 1 Y N N 74.662 38.100 4.639 5.347 4.675 0.348 C22 V1D 3 V1D C21 C3 C 0 1 Y N N 74.969 37.227 5.665 6.636 4.512 0.821 C21 V1D 4 V1D C20 C4 C 0 1 Y N N 74.994 35.868 5.438 7.173 3.245 0.962 C20 V1D 5 V1D C19 C5 C 0 1 Y N N 74.717 35.365 4.178 6.424 2.134 0.631 C19 V1D 6 V1D C18 C6 C 0 1 Y N N 74.396 36.217 3.124 5.123 2.289 0.159 C18 V1D 7 V1D C17 C7 C 0 1 Y N N 74.090 35.661 1.795 4.312 1.098 -0.194 C17 V1D 8 V1D C16 C8 C 0 1 Y N N 73.477 36.247 0.727 4.708 -0.198 -0.101 C16 V1D 9 V1D N3 N1 N 0 1 Y N N 73.433 35.312 -0.244 3.656 -0.962 -0.524 N3 V1D 10 V1D N4 N2 N 0 1 Y N N 74.428 34.337 1.459 3.046 1.107 -0.659 N4 V1D 11 V1D C15 C9 C 0 1 Y N N 74.003 34.180 0.213 2.655 -0.120 -0.861 C15 V1D 12 V1D C5 C10 C 0 1 N N S 74.109 32.897 -0.567 1.302 -0.533 -1.382 C5 V1D 13 V1D N1 N3 N 0 1 N N N 75.423 32.327 -0.332 1.194 -1.994 -1.355 N1 V1D 14 V1D C C11 C 0 1 N N N 76.448 32.397 -1.188 1.310 -2.657 -0.188 C V1D 15 V1D C1 C12 C 0 1 N N N 77.708 31.734 -0.674 1.198 -4.160 -0.160 C1 V1D 16 V1D C4 C13 C 0 1 N N N 78.461 32.582 0.382 1.352 -4.766 1.246 C4 V1D 17 V1D N N4 N 0 1 N N N 79.800 32.184 -0.299 2.797 -4.855 0.942 N V1D 18 V1D C3 C14 C 0 1 N N N 80.556 31.130 0.439 3.353 -6.136 1.396 C3 V1D 19 V1D C2 C15 C 0 1 N N N 78.982 31.711 -1.555 2.510 -4.885 -0.509 C2 V1D 20 V1D O O1 O 0 1 N N N 76.394 32.960 -2.279 1.503 -2.044 0.841 O V1D 21 V1D C6 C16 C 0 1 N N N 73.029 31.898 -0.133 0.209 0.076 -0.502 C6 V1D 22 V1D C7 C17 C 0 1 N N N 71.615 32.183 -0.629 -1.163 -0.240 -1.101 C7 V1D 23 V1D C8 C18 C 0 1 N N N 70.591 31.173 -0.108 -2.256 0.369 -0.221 C8 V1D 24 V1D C9 C19 C 0 1 N N N 69.160 31.335 -0.648 -3.628 0.054 -0.820 C9 V1D 25 V1D C10 C20 C 0 1 N N N 68.175 30.441 0.113 -4.721 0.663 0.060 C10 V1D 26 V1D C11 C21 C 0 1 N N N 66.823 30.206 -0.545 -6.093 0.348 -0.539 C11 V1D 27 V1D O1 O2 O 0 1 N N N 66.189 31.426 -0.780 -6.177 0.901 -1.854 O1 V1D 28 V1D O2 O3 O 0 1 N N N 66.880 29.427 -1.709 -6.269 -1.069 -0.606 O2 V1D 29 V1D C12 C22 C 0 1 Y N N 65.966 29.490 0.547 -7.170 0.947 0.328 C12 V1D 30 V1D N2 N5 N 0 1 Y N N 65.356 28.353 0.381 -6.999 1.637 1.419 N2 V1D 31 V1D O3 O4 O 0 1 Y N N 64.708 28.059 1.607 -8.054 1.986 1.895 O3 V1D 32 V1D C14 C23 C 0 1 Y N N 64.962 29.053 2.470 -9.091 1.561 1.160 C14 V1D 33 V1D C13 C24 C 0 1 Y N N 65.735 29.979 1.881 -8.566 0.878 0.115 C13 V1D 34 V1D H1 H1 H 0 1 N N N 74.648 39.167 4.806 4.933 5.666 0.240 H1 V1D 35 V1D H2 H2 H 0 1 N N N 75.190 37.612 6.650 7.227 5.378 1.082 H2 V1D 36 V1D H3 H3 H 0 1 N N N 75.231 35.192 6.246 8.181 3.125 1.331 H3 V1D 37 V1D H4 H4 H 0 1 N N N 74.750 34.299 4.010 6.846 1.146 0.741 H4 V1D 38 V1D H5 H5 H 0 1 N N N 73.102 37.258 0.670 5.668 -0.555 0.242 H5 V1D 39 V1D H6 H6 H 0 1 N N N 73.041 35.438 -1.155 3.635 -1.930 -0.576 H6 V1D 40 V1D H8 H8 H 0 1 N N N 73.981 33.114 -1.638 1.184 -0.179 -2.406 H8 V1D 41 V1D H9 H9 H 0 1 N N N 75.573 31.847 0.533 1.039 -2.484 -2.178 H9 V1D 42 V1D H10 H10 H 0 1 N N N 77.493 30.730 -0.280 0.331 -4.531 -0.706 H10 V1D 43 V1D H11 H11 H 0 1 N N N 78.235 33.658 0.344 1.115 -4.072 2.053 H11 V1D 44 V1D H12 H12 H 0 1 N N N 78.353 32.220 1.415 0.866 -5.735 1.362 H12 V1D 45 V1D H14 H14 H 0 1 N N N 81.083 31.585 1.291 2.840 -6.954 0.891 H14 V1D 46 V1D H15 H15 H 0 1 N N N 79.855 30.366 0.807 4.417 -6.175 1.160 H15 V1D 47 V1D H16 H16 H 0 1 N N N 81.287 30.662 -0.237 3.217 -6.231 2.473 H16 V1D 48 V1D H17 H17 H 0 1 N N N 79.259 30.715 -1.931 2.365 -5.889 -0.907 H17 V1D 49 V1D H18 H18 H 0 1 N N N 78.972 32.428 -2.389 3.198 -4.285 -1.105 H18 V1D 50 V1D H19 H19 H 0 1 N N N 73.004 31.887 0.967 0.273 -0.347 0.501 H19 V1D 51 V1D H20 H20 H 0 1 N N N 73.322 30.904 -0.503 0.344 1.156 -0.450 H20 V1D 52 V1D H21 H21 H 0 1 N N N 71.320 33.188 -0.293 -1.227 0.183 -2.104 H21 V1D 53 V1D H22 H22 H 0 1 N N N 71.614 32.149 -1.728 -1.297 -1.320 -1.152 H22 V1D 54 V1D H23 H23 H 0 1 N N N 70.551 31.266 0.987 -2.192 -0.053 0.782 H23 V1D 55 V1D H24 H24 H 0 1 N N N 70.942 30.166 -0.378 -2.121 1.450 -0.169 H24 V1D 56 V1D H25 H25 H 0 1 N N N 68.851 32.385 -0.536 -3.692 0.476 -1.823 H25 V1D 57 V1D H26 H26 H 0 1 N N N 69.145 31.060 -1.713 -3.763 -1.026 -0.871 H26 V1D 58 V1D H27 H27 H 0 1 N N N 68.653 29.460 0.253 -4.657 0.241 1.063 H27 V1D 59 V1D H28 H28 H 0 1 N N N 67.993 30.904 1.094 -4.587 1.743 0.112 H28 V1D 60 V1D H29 H29 H 0 1 N N N 66.165 31.931 0.024 -6.066 1.861 -1.884 H29 V1D 61 V1D H30 H30 H 0 1 N N N 67.316 28.604 -1.519 -6.224 -1.512 0.252 H30 V1D 62 V1D H31 H31 H 0 1 N N N 64.599 29.101 3.486 -10.139 1.733 1.359 H31 V1D 63 V1D H32 H32 H 0 1 N N N 66.105 30.896 2.316 -9.092 0.391 -0.693 H32 V1D 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V1D O C DOUB N N 1 V1D O2 C11 SING N N 2 V1D C2 C1 SING N N 3 V1D C2 N SING N N 4 V1D C C1 SING N N 5 V1D C N1 SING N N 6 V1D O1 C11 SING N N 7 V1D C1 C4 SING N N 8 V1D C9 C8 SING N N 9 V1D C9 C10 SING N N 10 V1D C7 C6 SING N N 11 V1D C7 C8 SING N N 12 V1D C5 N1 SING N N 13 V1D C5 C6 SING N N 14 V1D C5 C15 SING N N 15 V1D C11 C10 SING N N 16 V1D C11 C12 SING N N 17 V1D N C4 SING N N 18 V1D N C3 SING N N 19 V1D N3 C15 SING Y N 20 V1D N3 C16 SING Y N 21 V1D C15 N4 DOUB Y N 22 V1D N2 C12 DOUB Y N 23 V1D N2 O3 SING Y N 24 V1D C12 C13 SING Y N 25 V1D C16 C17 DOUB Y N 26 V1D N4 C17 SING Y N 27 V1D O3 C14 SING Y N 28 V1D C17 C18 SING N N 29 V1D C13 C14 DOUB Y N 30 V1D F C23 SING N N 31 V1D C18 C23 DOUB Y N 32 V1D C18 C19 SING Y N 33 V1D C23 C22 SING Y N 34 V1D C19 C20 DOUB Y N 35 V1D C22 C21 DOUB Y N 36 V1D C20 C21 SING Y N 37 V1D C22 H1 SING N N 38 V1D C21 H2 SING N N 39 V1D C20 H3 SING N N 40 V1D C19 H4 SING N N 41 V1D C16 H5 SING N N 42 V1D N3 H6 SING N N 43 V1D C5 H8 SING N N 44 V1D N1 H9 SING N N 45 V1D C1 H10 SING N N 46 V1D C4 H11 SING N N 47 V1D C4 H12 SING N N 48 V1D C3 H14 SING N N 49 V1D C3 H15 SING N N 50 V1D C3 H16 SING N N 51 V1D C2 H17 SING N N 52 V1D C2 H18 SING N N 53 V1D C6 H19 SING N N 54 V1D C6 H20 SING N N 55 V1D C7 H21 SING N N 56 V1D C7 H22 SING N N 57 V1D C8 H23 SING N N 58 V1D C8 H24 SING N N 59 V1D C9 H25 SING N N 60 V1D C9 H26 SING N N 61 V1D C10 H27 SING N N 62 V1D C10 H28 SING N N 63 V1D O1 H29 SING N N 64 V1D O2 H30 SING N N 65 V1D C14 H31 SING N N 66 V1D C13 H32 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V1D SMILES ACDLabs 12.01 "Fc1ccccc1c2cnc(n2)C(NC(C3CN(C)C3)=O)CCCCCC(c4ccon4)(O)O" V1D InChI InChI 1.03 "InChI=1S/C24H30FN5O4/c1-30-14-16(15-30)23(31)28-19(9-3-2-6-11-24(32,33)21-10-12-34-29-21)22-26-13-20(27-22)17-7-4-5-8-18(17)25/h4-5,7-8,10,12-13,16,19,32-33H,2-3,6,9,11,14-15H2,1H3,(H,26,27)(H,28,31)/t19-/m0/s1" V1D InChIKey InChI 1.03 KTQGXHKWGKIKPU-IBGZPJMESA-N V1D SMILES_CANONICAL CACTVS 3.385 "CN1CC(C1)C(=O)N[C@@H](CCCCCC(O)(O)c2ccon2)c3[nH]cc(n3)c4ccccc4F" V1D SMILES CACTVS 3.385 "CN1CC(C1)C(=O)N[CH](CCCCCC(O)(O)c2ccon2)c3[nH]cc(n3)c4ccccc4F" V1D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CC(C1)C(=O)N[C@@H](CCCCCC(c2ccon2)(O)O)c3[nH]cc(n3)c4ccccc4F" V1D SMILES "OpenEye OEToolkits" 2.0.7 "CN1CC(C1)C(=O)NC(CCCCCC(c2ccon2)(O)O)c3[nH]cc(n3)c4ccccc4F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V1D "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1S)-1-[4-(2-fluorophenyl)-1H-imidazol-2-yl]-7,7-dihydroxy-7-(1,2-oxazol-3-yl)heptyl]-1-methylazetidine-3-carboxamide" V1D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{S})-1-[4-(2-fluorophenyl)-1~{H}-imidazol-2-yl]-7-(1,2-oxazol-3-yl)-7,7-bis(oxidanyl)heptyl]-1-methyl-azetidine-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V1D "Create component" 2020-06-12 RCSB V1D "Initial release" 2020-07-29 RCSB ##