data_V4H # _chem_comp.id V4H _chem_comp.name "4-[(3~{R})-3-oxidanylpiperidin-1-yl]carbonylbenzaldehyde" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-12 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 233.263 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V4H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O6G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V4H C02 C1 C 0 1 N N R -17.661 23.425 2.755 -3.817 0.001 -0.490 C02 V4H 1 V4H C03 C2 C 0 1 N N N -16.428 24.203 3.048 -3.644 -1.518 -0.431 C03 V4H 2 V4H C04 C3 C 0 1 N N N -15.249 23.334 3.275 -2.186 -1.880 -0.722 C04 V4H 3 V4H C05 C4 C 0 1 N N N -15.229 22.080 2.391 -1.285 -1.249 0.344 C05 V4H 4 V4H C07 C5 C 0 1 N N N -15.902 21.286 -0.009 -0.544 1.083 0.270 C07 V4H 5 V4H C08 C6 C 0 1 Y N N -16.930 21.245 -1.158 0.858 0.609 0.213 C08 V4H 6 V4H C09 C7 C 0 1 Y N N -18.060 20.435 -1.078 1.756 1.193 -0.682 C09 V4H 7 V4H C10 C8 C 0 1 Y N N -18.977 20.429 -2.120 3.060 0.753 -0.736 C10 V4H 8 V4H C11 C9 C 0 1 Y N N -18.741 21.216 -3.242 3.485 -0.277 0.107 C11 V4H 9 V4H C12 C10 C 0 1 Y N N -17.611 22.031 -3.314 2.585 -0.861 1.004 C12 V4H 10 V4H C13 C11 C 0 1 Y N N -16.704 22.046 -2.275 1.283 -0.416 1.059 C13 V4H 11 V4H C14 C12 C 0 1 N N N -19.755 21.175 -4.381 4.880 -0.749 0.050 C14 V4H 12 V4H C16 C13 C 0 1 N N N -17.521 22.707 1.422 -2.934 0.653 0.579 C16 V4H 13 V4H N06 N1 N 0 1 N N N -16.205 22.000 1.229 -1.550 0.195 0.393 N06 V4H 14 V4H O01 O1 O 0 1 N N N -18.769 24.275 2.637 -5.185 0.336 -0.248 O01 V4H 15 V4H O15 O2 O 0 1 N N N -14.870 20.733 -0.147 -0.786 2.272 0.206 O15 V4H 16 V4H H1 H1 H 0 1 N N N -17.823 22.681 3.549 -3.522 0.362 -1.475 H1 V4H 17 V4H H2 H2 H 0 1 N N N -16.219 24.866 2.196 -3.915 -1.876 0.563 H2 V4H 18 V4H H3 H3 H 0 1 N N N -16.599 24.808 3.950 -4.290 -1.986 -1.174 H3 V4H 19 V4H H4 H4 H 0 1 N N N -15.249 23.017 4.328 -2.069 -2.964 -0.703 H4 V4H 20 V4H H5 H5 H 0 1 N N N -14.341 23.919 3.068 -1.907 -1.501 -1.706 H5 V4H 21 V4H H6 H6 H 0 1 N N N -15.430 21.218 3.044 -1.501 -1.694 1.315 H6 V4H 22 V4H H7 H7 H 0 1 N N N -14.216 21.994 1.971 -0.240 -1.422 0.087 H7 V4H 23 V4H H8 H8 H 0 1 N N N -18.222 19.814 -0.209 1.427 1.990 -1.334 H8 V4H 24 V4H H9 H9 H 0 1 N N N -19.866 19.819 -2.060 3.754 1.205 -1.430 H9 V4H 25 V4H H10 H10 H 0 1 N N N -17.446 22.650 -4.183 2.912 -1.658 1.656 H10 V4H 26 V4H H11 H11 H 0 1 N N N -15.826 22.673 -2.327 0.587 -0.867 1.752 H11 V4H 27 V4H H12 H12 H 0 1 N N N -20.699 20.662 -4.271 5.208 -1.545 0.702 H12 V4H 28 V4H H15 H15 H 0 1 N N N -17.633 23.450 0.618 -2.977 1.737 0.476 H15 V4H 29 V4H H16 H16 H 0 1 N N N -18.326 21.961 1.347 -3.286 0.366 1.569 H16 V4H 30 V4H H17 H17 H 0 1 N N N -18.895 24.747 3.452 -5.367 1.285 -0.271 H17 V4H 31 V4H O1 O3 O 0 1 N Y N -19.413 21.837 -5.593 5.660 -0.243 -0.728 O1 V4H 32 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V4H C14 C11 SING N N 1 V4H C12 C11 DOUB Y N 2 V4H C12 C13 SING Y N 3 V4H C11 C10 SING Y N 4 V4H C13 C08 DOUB Y N 5 V4H C10 C09 DOUB Y N 6 V4H C08 C09 SING Y N 7 V4H C08 C07 SING N N 8 V4H O15 C07 DOUB N N 9 V4H C07 N06 SING N N 10 V4H N06 C16 SING N N 11 V4H N06 C05 SING N N 12 V4H C16 C02 SING N N 13 V4H C05 C04 SING N N 14 V4H O01 C02 SING N N 15 V4H C02 C03 SING N N 16 V4H C03 C04 SING N N 17 V4H C02 H1 SING N N 18 V4H C03 H2 SING N N 19 V4H C03 H3 SING N N 20 V4H C04 H4 SING N N 21 V4H C04 H5 SING N N 22 V4H C05 H6 SING N N 23 V4H C05 H7 SING N N 24 V4H C09 H8 SING N N 25 V4H C10 H9 SING N N 26 V4H C12 H10 SING N N 27 V4H C13 H11 SING N N 28 V4H C14 H12 SING N N 29 V4H C16 H15 SING N N 30 V4H C16 H16 SING N N 31 V4H O01 H17 SING N N 32 V4H C14 O1 DOUB N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V4H InChI InChI 1.03 "InChI=1S/C13H15NO3/c15-9-10-3-5-11(6-4-10)13(17)14-7-1-2-12(16)8-14/h3-6,9,12,16H,1-2,7-8H2/t12-/m1/s1" V4H InChIKey InChI 1.03 PPFSSDOIHGGARW-GFCCVEGCSA-N V4H SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1CCCN(C1)C(=O)c2ccc(C=O)cc2" V4H SMILES CACTVS 3.385 "O[CH]1CCCN(C1)C(=O)c2ccc(C=O)cc2" V4H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C=O)C(=O)N2CCC[C@H](C2)O" V4H SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C=O)C(=O)N2CCCC(C2)O" # _pdbx_chem_comp_identifier.comp_id V4H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[(3~{R})-3-oxidanylpiperidin-1-yl]carbonylbenzaldehyde" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V4H "Create component" 2021-04-12 PDBE V4H "Initial release" 2021-06-09 RCSB ##