data_VGF # _chem_comp.id VGF _chem_comp.name "1-(3,4-DICHLOROBENZYL)-7-PHENYL-1H-BENZIMIDAZOL-2-AMINE" _chem_comp.type non-polymer _chem_comp.pdbx_type ? _chem_comp.formula "C20 H15 Cl2 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-03-20 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VGF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WD8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VGF CAN CAN C 0 1 Y N N 1.291 -13.864 14.863 -1.274 0.264 -0.349 CAN VGF 1 VGF CAS CAS C 0 1 Y N N 0.061 -14.439 15.176 -2.530 0.158 0.221 CAS VGF 2 VGF CLAC CLAC CL 0 0 N N N -0.618 -15.692 14.165 -3.220 1.513 1.059 CLAC VGF 3 VGF CAR CAR C 0 1 Y N N -0.634 -14.004 16.316 -3.236 -1.028 0.123 CAR VGF 4 VGF CLAB CLAB CL 0 0 N N N -2.168 -14.720 16.703 -4.813 -1.163 0.837 CLAB VGF 5 VGF CAK CAK C 0 1 Y N N -0.105 -13.000 17.123 -2.685 -2.107 -0.546 CAK VGF 6 VGF CAJ CAJ C 0 1 Y N N 1.128 -12.418 16.784 -1.430 -2.000 -1.115 CAJ VGF 7 VGF CAQ CAQ C 0 1 Y N N 1.833 -12.846 15.646 -0.725 -0.815 -1.016 CAQ VGF 8 VGF CAO CAO C 0 1 N N N 3.199 -12.219 15.270 0.643 -0.699 -1.638 CAO VGF 9 VGF NAY NAY N 0 1 Y N N 3.537 -11.241 16.313 1.647 -1.231 -0.712 NAY VGF 10 VGF CAX CAX C 0 1 Y N N 4.160 -11.501 17.477 2.402 -0.499 0.187 CAX VGF 11 VGF CAU CAU C 0 1 Y N N 3.252 -9.935 16.258 2.006 -2.541 -0.572 CAU VGF 12 VGF NAA NAA N 0 1 N N N 2.632 -9.329 15.245 1.473 -3.590 -1.291 NAA VGF 13 VGF NAP NAP N 0 1 Y N N 3.669 -9.333 17.368 2.932 -2.652 0.348 NAP VGF 14 VGF CAW CAW C 0 1 Y N N 4.219 -10.274 18.150 3.220 -1.424 0.854 CAW VGF 15 VGF CAM CAM C 0 1 Y N N 4.826 -10.218 19.415 4.108 -0.976 1.837 CAM VGF 16 VGF CAG CAG C 0 1 Y N N 5.335 -11.371 20.012 4.176 0.366 2.145 CAG VGF 17 VGF CAL CAL C 0 1 Y N N 5.259 -12.592 19.337 3.372 1.282 1.490 CAL VGF 18 VGF CAV CAV C 0 1 Y N N 4.673 -12.664 18.078 2.480 0.858 0.508 CAV VGF 19 VGF CAT CAT C 0 1 Y N N 4.589 -13.906 17.417 1.619 1.841 -0.192 CAT VGF 20 VGF CAH CAH C 0 1 Y N N 3.592 -14.826 17.756 0.734 2.637 0.533 CAH VGF 21 VGF CAE CAE C 0 1 Y N N 3.516 -16.058 17.086 -0.065 3.550 -0.124 CAE VGF 22 VGF CAD CAD C 0 1 Y N N 4.430 -16.370 16.085 0.010 3.676 -1.500 CAD VGF 23 VGF CAF CAF C 0 1 Y N N 5.428 -15.453 15.734 0.886 2.888 -2.224 CAF VGF 24 VGF CAI CAI C 0 1 Y N N 5.507 -14.230 16.402 1.695 1.976 -1.577 CAI VGF 25 VGF HAN HAN H 0 1 N N N 1.835 -14.214 13.998 -0.724 1.191 -0.276 HAN VGF 26 VGF HAK HAK H 0 1 N N N -0.638 -12.671 18.003 -3.235 -3.033 -0.623 HAK VGF 27 VGF HAJ HAJ H 0 1 N N N 1.538 -11.634 17.404 -1.000 -2.842 -1.636 HAJ VGF 28 VGF HAO1 HAO1 H 0 0 N N N 3.972 -12.999 15.217 0.670 -1.268 -2.567 HAO1 VGF 29 VGF HAO2 HAO2 H 0 0 N N N 3.143 -11.731 14.286 0.860 0.349 -1.846 HAO2 VGF 30 VGF HAA1 HAA1 H 0 0 N N N 1.673 -9.177 15.483 0.788 -3.423 -1.957 HAA1 VGF 31 VGF HAA2 HAA2 H 0 0 N N N 3.073 -8.450 15.062 1.783 -4.495 -1.131 HAA2 VGF 32 VGF HAM HAM H 0 1 N N N 4.899 -9.272 19.931 4.740 -1.681 2.355 HAM VGF 33 VGF HAG HAG H 0 1 N N N 5.786 -11.320 20.992 4.864 0.706 2.905 HAG VGF 34 VGF HAL HAL H 0 1 N N N 5.658 -13.485 19.796 3.435 2.330 1.741 HAL VGF 35 VGF HAH HAH H 0 1 N N N 2.880 -14.589 18.533 0.674 2.539 1.607 HAH VGF 36 VGF HAI HAI H 0 1 N N N 6.281 -13.525 16.137 2.382 1.365 -2.143 HAI VGF 37 VGF HAE HAE H 0 1 N N N 2.744 -16.766 17.349 -0.752 4.168 0.437 HAE VGF 38 VGF HAD HAD H 0 1 N N N 4.370 -17.321 15.578 -0.618 4.392 -2.010 HAD VGF 39 VGF HAF HAF H 0 1 N N N 6.133 -15.691 14.951 0.941 2.990 -3.298 HAF VGF 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VGF CAN CAS SING Y N 1 VGF CAN CAQ DOUB Y N 2 VGF CAS CLAC SING N N 3 VGF CAS CAR DOUB Y N 4 VGF CAR CLAB SING N N 5 VGF CAR CAK SING Y N 6 VGF CAK CAJ DOUB Y N 7 VGF CAJ CAQ SING Y N 8 VGF CAQ CAO SING N N 9 VGF CAO NAY SING N N 10 VGF NAY CAX SING Y N 11 VGF NAY CAU SING Y N 12 VGF CAX CAW SING Y N 13 VGF CAX CAV DOUB Y N 14 VGF CAU NAA SING N N 15 VGF CAU NAP DOUB Y N 16 VGF NAP CAW SING Y N 17 VGF CAW CAM DOUB Y N 18 VGF CAM CAG SING Y N 19 VGF CAG CAL DOUB Y N 20 VGF CAL CAV SING Y N 21 VGF CAV CAT SING Y N 22 VGF CAT CAH SING Y N 23 VGF CAT CAI DOUB Y N 24 VGF CAH CAE DOUB Y N 25 VGF CAE CAD SING Y N 26 VGF CAD CAF DOUB Y N 27 VGF CAF CAI SING Y N 28 VGF CAN HAN SING N N 29 VGF CAK HAK SING N N 30 VGF CAJ HAJ SING N N 31 VGF CAO HAO1 SING N N 32 VGF CAO HAO2 SING N N 33 VGF NAA HAA1 SING N N 34 VGF NAA HAA2 SING N N 35 VGF CAM HAM SING N N 36 VGF CAG HAG SING N N 37 VGF CAL HAL SING N N 38 VGF CAH HAH SING N N 39 VGF CAI HAI SING N N 40 VGF CAE HAE SING N N 41 VGF CAD HAD SING N N 42 VGF CAF HAF SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VGF SMILES ACDLabs 10.04 "Clc1ccc(cc1Cl)Cn2c3c(nc2N)cccc3c4ccccc4" VGF SMILES_CANONICAL CACTVS 3.352 "Nc1nc2cccc(c3ccccc3)c2n1Cc4ccc(Cl)c(Cl)c4" VGF SMILES CACTVS 3.352 "Nc1nc2cccc(c3ccccc3)c2n1Cc4ccc(Cl)c(Cl)c4" VGF SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1ccc(cc1)c2cccc3c2n(c(n3)N)Cc4ccc(c(c4)Cl)Cl" VGF SMILES "OpenEye OEToolkits" 1.6.1 "c1ccc(cc1)c2cccc3c2n(c(n3)N)Cc4ccc(c(c4)Cl)Cl" VGF InChI InChI 1.03 "InChI=1S/C20H15Cl2N3/c21-16-10-9-13(11-17(16)22)12-25-19-15(14-5-2-1-3-6-14)7-4-8-18(19)24-20(25)23/h1-11H,12H2,(H2,23,24)" VGF InChIKey InChI 1.03 JFVMZMBFRZPOFF-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VGF "SYSTEMATIC NAME" ACDLabs 10.04 "1-(3,4-dichlorobenzyl)-7-phenyl-1H-benzimidazol-2-amine" VGF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "1-[(3,4-dichlorophenyl)methyl]-7-phenyl-benzimidazol-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VGF "Create component" 2009-03-20 EBI VGF "Modify aromatic_flag" 2011-06-04 RCSB VGF "Modify descriptor" 2011-06-04 RCSB #