data_VI1 # _chem_comp.id VI1 _chem_comp.name "(1R,2R)-2-{[3-(methoxycarbonyl)-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H27 N O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-12 _chem_comp.pdbx_modified_date 2024-04-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 393.497 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VI1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TV7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VI1 C2 C1 C 0 1 Y N N N N N -1.966 10.595 13.891 2.893 -0.107 -0.288 C2 VI1 1 VI1 C3 C2 C 0 1 Y N N N N N -0.843 9.766 13.906 1.682 -0.858 0.057 C3 VI1 2 VI1 C4 C3 C 0 1 Y N N N N N -0.075 9.891 15.038 0.527 -0.161 -0.136 C4 VI1 3 VI1 C5 C4 C 0 1 N N N N N N -0.485 8.885 12.888 1.711 -2.232 0.563 C5 VI1 4 VI1 C6 C5 C 0 1 N N N N N N 0.968 7.110 12.140 1.695 -4.603 0.273 C6 VI1 5 VI1 C7 C6 C 0 1 N N N N N N 1.763 9.400 16.472 -1.824 0.118 -0.120 C7 VI1 6 VI1 C10 C7 C 0 1 N N N N N N 4.510 7.224 18.244 -4.851 -2.201 -0.470 C10 VI1 7 VI1 C11 C8 C 0 1 N N N N N N 5.696 7.935 17.652 -5.889 -1.127 -0.803 C11 VI1 8 VI1 C12 C9 C 0 1 N N N N N N 5.449 8.141 16.196 -5.648 0.104 0.072 C12 VI1 9 VI1 C14 C10 C 0 1 N N N N N N 4.085 9.347 14.488 -4.007 1.865 0.669 C14 VI1 10 VI1 C16 C11 C 0 1 N N N N N N -3.084 12.288 15.280 3.607 2.220 -1.010 C16 VI1 11 VI1 C18 C12 C 0 1 N N N N N N -2.448 11.865 11.867 5.380 0.048 -0.764 C18 VI1 12 VI1 C19 C13 C 0 1 N N N N N N -2.841 13.232 12.420 5.855 1.022 0.299 C19 VI1 13 VI1 C20 C14 C 0 1 N N N N N N -1.994 13.804 13.513 4.729 1.609 1.127 C20 VI1 14 VI1 O4 O1 O 0 1 N N N N N N 4.551 10.413 14.019 -4.802 2.940 0.549 O4 VI1 15 VI1 O5 O2 O 0 1 N N N N N N 3.515 8.450 13.823 -3.101 1.870 1.469 O5 VI1 16 VI1 C13 C15 C 0 1 N N R N N N 4.271 9.092 15.994 -4.244 0.652 -0.193 C13 VI1 17 VI1 C9 C16 C 0 1 N N N N N N 3.303 8.180 18.124 -3.447 -1.653 -0.735 C9 VI1 18 VI1 C8 C17 C 0 1 N N R N N N 3.011 8.485 16.632 -3.206 -0.422 0.141 C8 VI1 19 VI1 O3 O3 O 0 1 N N N N N N 1.390 10.132 17.394 -1.682 1.250 -0.533 O3 VI1 20 VI1 N1 N1 N 0 1 N N N N N N 1.069 9.226 15.327 -0.744 -0.657 0.104 N1 VI1 21 VI1 S1 S1 S 0 1 Y N N N N N -0.803 11.041 16.127 0.865 1.402 -0.712 S1 VI1 22 VI1 C1 C18 C 0 1 Y N N N N N -2.066 11.351 15.043 2.606 1.133 -0.665 C1 VI1 23 VI1 C17 C19 C 0 1 N N N N N N -2.519 13.664 14.910 4.175 2.773 0.301 C17 VI1 24 VI1 C15 C20 C 0 1 N N N N N N -2.973 10.752 12.852 4.238 -0.825 -0.261 C15 VI1 25 VI1 O2 O4 O 0 1 N N N N N N -1.093 8.796 11.817 1.778 -2.438 1.760 O2 VI1 26 VI1 O1 O5 O 0 1 N N N N N N 0.573 8.056 13.158 1.662 -3.269 -0.299 O1 VI1 27 VI1 H1 H1 H 0 1 N N N N N N 1.824 6.520 12.499 2.618 -4.734 0.838 H1 VI1 28 VI1 H2 H2 H 0 1 N N N N N N 0.126 6.438 11.918 0.841 -4.734 0.938 H2 VI1 29 VI1 H3 H3 H 0 1 N N N N N N 1.255 7.652 11.227 1.650 -5.342 -0.526 H3 VI1 30 VI1 H4 H4 H 0 1 N N N N N N 4.312 6.294 17.690 -4.940 -2.479 0.581 H4 VI1 31 VI1 H5 H5 H 0 1 N N N N N N 4.701 6.987 19.301 -5.022 -3.078 -1.094 H5 VI1 32 VI1 H6 H6 H 0 1 N N N N N N 6.601 7.326 17.792 -5.799 -0.850 -1.854 H6 VI1 33 VI1 H7 H7 H 0 1 N N N N N N 5.829 8.908 18.147 -6.889 -1.518 -0.614 H7 VI1 34 VI1 H8 H8 H 0 1 N N N N N N 5.221 7.173 15.725 -6.387 0.869 -0.166 H8 VI1 35 VI1 H9 H9 H 0 1 N N N N N N 6.348 8.572 15.732 -5.737 -0.174 1.122 H9 VI1 36 VI1 H10 H10 H 0 1 N N N N N N -3.374 12.271 16.341 4.412 1.801 -1.613 H10 VI1 37 VI1 H11 H11 H 0 1 N N N N N N -3.961 12.059 14.657 3.109 3.017 -1.562 H11 VI1 38 VI1 H12 H12 H 0 1 N N N N N N -2.900 11.724 10.874 5.041 0.610 -1.634 H12 VI1 39 VI1 H13 H13 H 0 1 N N N N N N -1.353 11.800 11.784 6.213 -0.591 -1.058 H13 VI1 40 VI1 H14 H14 H 0 1 N N N N N N -2.823 13.944 11.582 6.544 0.503 0.965 H14 VI1 41 VI1 H15 H15 H 0 1 N N N N N N -3.867 13.148 12.808 6.391 1.837 -0.188 H15 VI1 42 VI1 H16 H16 H 0 1 N N N N N N -1.015 13.305 13.473 3.954 0.860 1.291 H16 VI1 43 VI1 H17 H17 H 0 1 N N N N N N -1.867 14.878 13.310 5.112 1.972 2.080 H17 VI1 44 VI1 H18 H18 H 0 1 N N N N N N 4.406 10.437 13.080 -4.611 3.693 1.124 H18 VI1 45 VI1 H19 H19 H 0 1 N N N N N N 4.495 10.048 16.490 -4.155 0.930 -1.243 H19 VI1 46 VI1 H20 H20 H 0 1 N N N N N N 3.529 9.119 18.650 -2.708 -2.418 -0.497 H20 VI1 47 VI1 H21 H21 H 0 1 N N N N N N 2.419 7.709 18.579 -3.358 -1.375 -1.785 H21 VI1 48 VI1 H22 H22 H 0 1 N N N N N N 2.798 7.531 16.127 -3.296 -0.700 1.191 H22 VI1 49 VI1 H23 H23 H 0 1 N N N N N N 1.418 8.571 14.657 -0.858 -1.563 0.434 H23 VI1 50 VI1 H24 H24 H 0 1 N N N N N N -1.695 13.887 15.603 4.975 3.480 0.082 H24 VI1 51 VI1 H25 H25 H 0 1 N N N N N N -3.321 14.405 15.044 3.384 3.274 0.859 H25 VI1 52 VI1 H26 H26 H 0 1 N N N N N N -3.930 11.062 13.297 4.453 -1.130 0.763 H26 VI1 53 VI1 H27 H27 H 0 1 N N N N N N -3.110 9.803 12.312 4.174 -1.716 -0.886 H27 VI1 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VI1 O2 C5 DOUB N N 1 VI1 C18 C19 SING N N 2 VI1 C18 C15 SING N N 3 VI1 C6 O1 SING N N 4 VI1 C19 C20 SING N N 5 VI1 C15 C2 SING N N 6 VI1 C5 O1 SING N N 7 VI1 C5 C3 SING N N 8 VI1 C20 C17 SING N N 9 VI1 O5 C14 DOUB N N 10 VI1 C2 C3 SING Y N 11 VI1 C2 C1 DOUB Y N 12 VI1 C3 C4 DOUB Y N 13 VI1 O4 C14 SING N N 14 VI1 C14 C13 SING N N 15 VI1 C17 C16 SING N N 16 VI1 C4 N1 SING N N 17 VI1 C4 S1 SING Y N 18 VI1 C1 C16 SING N N 19 VI1 C1 S1 SING Y N 20 VI1 N1 C7 SING N N 21 VI1 C13 C12 SING N N 22 VI1 C13 C8 SING N N 23 VI1 C12 C11 SING N N 24 VI1 C7 C8 SING N N 25 VI1 C7 O3 DOUB N N 26 VI1 C8 C9 SING N N 27 VI1 C11 C10 SING N N 28 VI1 C9 C10 SING N N 29 VI1 C6 H1 SING N N 30 VI1 C6 H2 SING N N 31 VI1 C6 H3 SING N N 32 VI1 C10 H4 SING N N 33 VI1 C10 H5 SING N N 34 VI1 C11 H6 SING N N 35 VI1 C11 H7 SING N N 36 VI1 C12 H8 SING N N 37 VI1 C12 H9 SING N N 38 VI1 C16 H10 SING N N 39 VI1 C16 H11 SING N N 40 VI1 C18 H12 SING N N 41 VI1 C18 H13 SING N N 42 VI1 C19 H14 SING N N 43 VI1 C19 H15 SING N N 44 VI1 C20 H16 SING N N 45 VI1 C20 H17 SING N N 46 VI1 O4 H18 SING N N 47 VI1 C13 H19 SING N N 48 VI1 C9 H20 SING N N 49 VI1 C9 H21 SING N N 50 VI1 C8 H22 SING N N 51 VI1 N1 H23 SING N N 52 VI1 C17 H24 SING N N 53 VI1 C17 H25 SING N N 54 VI1 C15 H26 SING N N 55 VI1 C15 H27 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VI1 SMILES ACDLabs 12.01 "O=C(O)C1CCCCC1C(=O)Nc1sc2CCCCCCc2c1C(=O)OC" VI1 InChI InChI 1.06 "InChI=1S/C20H27NO5S/c1-26-20(25)16-14-10-4-2-3-5-11-15(14)27-18(16)21-17(22)12-8-6-7-9-13(12)19(23)24/h12-13H,2-11H2,1H3,(H,21,22)(H,23,24)/t12-,13-/m1/s1" VI1 InChIKey InChI 1.06 FLTXXOCJBMXERF-CHWSQXEVSA-N VI1 SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1c2CCCCCCc2sc1NC(=O)[C@@H]3CCCC[C@H]3C(O)=O" VI1 SMILES CACTVS 3.385 "COC(=O)c1c2CCCCCCc2sc1NC(=O)[CH]3CCCC[CH]3C(O)=O" VI1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)c1c2c(sc1NC(=O)[C@@H]3CCCC[C@H]3C(=O)O)CCCCCC2" VI1 SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)c1c2c(sc1NC(=O)C3CCCCC3C(=O)O)CCCCCC2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VI1 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2R)-2-{[3-(methoxycarbonyl)-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid" VI1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{R})-2-[(3-methoxycarbonyl-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl)carbamoyl]cyclohexane-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VI1 "Create component" 2023-09-12 RCSB VI1 "Initial release" 2024-04-24 RCSB #