data_VLY # _chem_comp.id VLY _chem_comp.name "1-methyl-5-phenyl-6-{[(1R)-1-phenylethyl]sulfanyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H18 N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-27 _chem_comp.pdbx_modified_date 2020-12-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VLY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JWS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VLY C1 C1 C 0 1 N N N 37.475 -15.749 16.716 -2.912 -0.293 0.067 C1 VLY 1 VLY N2 N1 N 0 1 N N N 38.679 -16.085 16.047 -1.640 -0.749 0.043 N2 VLY 2 VLY C3 C2 C 0 1 N N N 38.676 -16.853 14.843 -0.593 0.130 0.015 C3 VLY 3 VLY N4 N2 N 0 1 N N N 37.481 -17.321 14.286 -0.775 1.431 0.012 N4 VLY 4 VLY C5 C3 C 0 1 Y N N 36.281 -17.018 14.913 -2.006 1.960 0.034 C5 VLY 5 VLY C6 C4 C 0 1 Y N N 36.197 -16.231 16.144 -3.123 1.109 0.058 C6 VLY 6 VLY C7 C5 C 0 1 Y N N 34.822 -16.126 16.491 -4.270 1.929 0.078 C7 VLY 7 VLY C10 C6 C 0 1 N N N 34.402 -18.099 13.504 -1.678 4.454 0.012 C10 VLY 8 VLY C12 C7 C 0 1 Y N N 39.878 -15.584 16.585 -1.393 -2.128 0.046 C12 VLY 9 VLY C13 C8 C 0 1 Y N N 40.179 -14.250 16.303 -1.248 -2.806 1.249 C13 VLY 10 VLY C14 C9 C 0 1 Y N N 41.342 -13.676 16.795 -1.005 -4.166 1.249 C14 VLY 11 VLY C15 C10 C 0 1 Y N N 42.204 -14.434 17.579 -0.907 -4.852 0.052 C15 VLY 12 VLY C16 C11 C 0 1 Y N N 41.904 -15.769 17.865 -1.050 -4.179 -1.148 C16 VLY 13 VLY C17 C12 C 0 1 Y N N 40.734 -16.343 17.369 -1.299 -2.821 -1.154 C17 VLY 14 VLY C19 C13 C 0 1 N N R 39.905 -18.430 12.792 1.984 1.049 -0.045 C19 VLY 15 VLY O11 O1 O 0 1 N N N 37.489 -15.069 17.766 -3.853 -1.066 0.092 O11 VLY 16 VLY N8 N3 N 0 1 Y N N 34.099 -16.794 15.556 -3.885 3.174 0.068 N8 VLY 17 VLY N9 N4 N 0 1 Y N N 35.016 -17.326 14.611 -2.486 3.232 0.037 N9 VLY 18 VLY S18 S1 S 0 1 N N N 40.145 -17.220 14.069 1.052 -0.502 -0.016 S18 VLY 19 VLY C26 C14 C 0 1 N N N 39.929 -19.841 13.388 1.697 1.792 -1.351 C26 VLY 20 VLY C20 C15 C 0 1 Y N N 40.959 -18.264 11.755 3.458 0.750 0.050 C20 VLY 21 VLY C25 C16 C 0 1 Y N N 42.303 -18.475 12.075 4.199 1.252 1.104 C25 VLY 22 VLY C24 C17 C 0 1 Y N N 43.298 -18.314 11.112 5.551 0.979 1.190 C24 VLY 23 VLY C23 C18 C 0 1 Y N N 42.958 -17.947 9.811 6.163 0.204 0.223 C23 VLY 24 VLY C22 C19 C 0 1 Y N N 41.619 -17.736 9.481 5.423 -0.298 -0.831 C22 VLY 25 VLY C21 C20 C 0 1 Y N N 40.621 -17.895 10.449 4.069 -0.030 -0.914 C21 VLY 26 VLY H1 H1 H 0 1 N N N 34.422 -15.606 17.349 -5.293 1.584 0.098 H1 VLY 27 VLY H2 H2 H 0 1 N N N 33.309 -18.115 13.629 -1.500 4.751 -1.022 H2 VLY 28 VLY H3 H3 H 0 1 N N N 34.654 -17.627 12.543 -2.208 5.251 0.532 H3 VLY 29 VLY H4 H4 H 0 1 N N N 34.787 -19.129 13.518 -0.724 4.269 0.506 H4 VLY 30 VLY H5 H5 H 0 1 N N N 39.503 -13.662 15.699 -1.324 -2.271 2.184 H5 VLY 31 VLY H6 H6 H 0 1 N N N 41.576 -12.646 16.570 -0.892 -4.694 2.184 H6 VLY 32 VLY H7 H7 H 0 1 N N N 43.108 -13.990 17.968 -0.717 -5.915 0.055 H7 VLY 33 VLY H8 H8 H 0 1 N N N 42.579 -16.356 18.470 -0.972 -4.718 -2.080 H8 VLY 34 VLY H9 H9 H 0 1 N N N 40.496 -17.372 17.594 -1.416 -2.297 -2.091 H9 VLY 35 VLY H10 H10 H 0 1 N N N 38.914 -18.235 12.356 1.684 1.669 0.800 H10 VLY 36 VLY H11 H11 H 0 1 N N N 39.140 -19.931 14.149 1.997 1.172 -2.195 H11 VLY 37 VLY H12 H12 H 0 1 N N N 39.755 -20.579 12.591 0.631 2.008 -1.419 H12 VLY 38 VLY H13 H13 H 0 1 N N N 40.909 -20.026 13.852 2.259 2.726 -1.368 H13 VLY 39 VLY H14 H14 H 0 1 N N N 42.574 -18.766 13.079 3.721 1.858 1.859 H14 VLY 40 VLY H15 H15 H 0 1 N N N 44.333 -18.474 11.374 6.130 1.372 2.013 H15 VLY 41 VLY H16 H16 H 0 1 N N N 43.727 -17.827 9.062 7.220 -0.009 0.290 H16 VLY 42 VLY H17 H17 H 0 1 N N N 41.352 -17.449 8.475 5.901 -0.903 -1.587 H17 VLY 43 VLY H18 H18 H 0 1 N N N 39.586 -17.732 10.187 3.490 -0.422 -1.737 H18 VLY 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VLY C22 C23 DOUB Y N 1 VLY C22 C21 SING Y N 2 VLY C23 C24 SING Y N 3 VLY C21 C20 DOUB Y N 4 VLY C24 C25 DOUB Y N 5 VLY C20 C25 SING Y N 6 VLY C20 C19 SING N N 7 VLY C19 C26 SING N N 8 VLY C19 S18 SING N N 9 VLY C10 N9 SING N N 10 VLY S18 C3 SING N N 11 VLY N4 C3 DOUB N N 12 VLY N4 C5 SING N N 13 VLY N9 C5 SING Y N 14 VLY N9 N8 SING Y N 15 VLY C3 N2 SING N N 16 VLY C5 C6 DOUB Y N 17 VLY N8 C7 DOUB Y N 18 VLY N2 C12 SING N N 19 VLY N2 C1 SING N N 20 VLY C6 C7 SING Y N 21 VLY C6 C1 SING N N 22 VLY C13 C12 DOUB Y N 23 VLY C13 C14 SING Y N 24 VLY C12 C17 SING Y N 25 VLY C1 O11 DOUB N N 26 VLY C14 C15 DOUB Y N 27 VLY C17 C16 DOUB Y N 28 VLY C15 C16 SING Y N 29 VLY C7 H1 SING N N 30 VLY C10 H2 SING N N 31 VLY C10 H3 SING N N 32 VLY C10 H4 SING N N 33 VLY C13 H5 SING N N 34 VLY C14 H6 SING N N 35 VLY C15 H7 SING N N 36 VLY C16 H8 SING N N 37 VLY C17 H9 SING N N 38 VLY C19 H10 SING N N 39 VLY C26 H11 SING N N 40 VLY C26 H12 SING N N 41 VLY C26 H13 SING N N 42 VLY C25 H14 SING N N 43 VLY C24 H15 SING N N 44 VLY C23 H16 SING N N 45 VLY C22 H17 SING N N 46 VLY C21 H18 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VLY SMILES ACDLabs 12.01 "C2(=O)N(c1ccccc1)C(=Nc3c2cnn3C)SC(C)c4ccccc4" VLY InChI InChI 1.03 "InChI=1S/C20H18N4OS/c1-14(15-9-5-3-6-10-15)26-20-22-18-17(13-21-23(18)2)19(25)24(20)16-11-7-4-8-12-16/h3-14H,1-2H3/t14-/m1/s1" VLY InChIKey InChI 1.03 JNPNRKXZLIGUCT-CQSZACIVSA-N VLY SMILES_CANONICAL CACTVS 3.385 "C[C@@H](SC1=Nc2n(C)ncc2C(=O)N1c3ccccc3)c4ccccc4" VLY SMILES CACTVS 3.385 "C[CH](SC1=Nc2n(C)ncc2C(=O)N1c3ccccc3)c4ccccc4" VLY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1ccccc1)SC2=Nc3c(cnn3C)C(=O)N2c4ccccc4" VLY SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1)SC2=Nc3c(cnn3C)C(=O)N2c4ccccc4" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VLY "SYSTEMATIC NAME" ACDLabs 12.01 "1-methyl-5-phenyl-6-{[(1R)-1-phenylethyl]sulfanyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one" VLY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-methyl-5-phenyl-6-[(1~{R})-1-phenylethyl]sulfanyl-pyrazolo[3,4-d]pyrimidin-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VLY "Create component" 2020-08-27 RCSB VLY "Initial release" 2020-12-30 RCSB ##