data_VRO # _chem_comp.id VRO _chem_comp.name "5-[2-(4-methoxyphenyl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-11-29 _chem_comp.pdbx_modified_date 2013-11-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.271 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VRO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3W2L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VRO OAB OAB O 0 1 N N N -6.131 -15.799 14.185 0.778 2.213 0.299 OAB VRO 1 VRO CAO CAO C 0 1 N N N -5.333 -14.822 14.239 1.980 2.069 0.204 CAO VRO 2 VRO OAE OAE O 0 1 N N N -4.098 -14.908 14.382 2.786 3.147 0.165 OAE VRO 3 VRO CAR CAR C 0 1 N N N -5.886 -13.462 14.166 2.560 0.707 0.137 CAR VRO 4 VRO NAL NAL N 0 1 N N N -5.418 -12.591 15.179 3.908 0.536 -0.095 NAL VRO 5 VRO CAT CAT C 0 1 N N N -5.827 -11.284 15.198 4.452 -0.691 -0.160 CAT VRO 6 VRO OAC OAC O 0 1 N N N -5.349 -10.455 16.035 5.646 -0.798 -0.366 OAC VRO 7 VRO NAM NAM N 0 1 N N N -6.628 -10.817 14.217 3.713 -1.803 -0.002 NAM VRO 8 VRO CAU CAU C 0 1 N N N -7.179 -11.655 13.223 2.387 -1.714 0.229 CAU VRO 9 VRO OAD OAD O 0 1 N N N -7.887 -11.122 12.385 1.715 -2.718 0.372 OAD VRO 10 VRO CAS CAS C 0 1 N N N -6.727 -12.994 13.188 1.769 -0.384 0.309 CAS VRO 11 VRO CAK CAK C 0 1 N N N -7.234 -13.884 12.100 0.292 -0.234 0.565 CAK VRO 12 VRO CAJ CAJ C 0 1 N N N -6.740 -13.486 10.768 -0.462 -0.259 -0.766 CAJ VRO 13 VRO CAP CAP C 0 1 Y N N -5.367 -13.490 10.745 -1.939 -0.109 -0.510 CAP VRO 14 VRO CAF CAF C 0 1 Y N N -4.524 -14.606 10.857 -2.509 1.150 -0.476 CAF VRO 15 VRO CAH CAH C 0 1 Y N N -3.104 -14.546 10.889 -3.863 1.291 -0.241 CAH VRO 16 VRO CAQ CAQ C 0 1 Y N N -2.530 -13.274 10.738 -4.651 0.167 -0.040 CAQ VRO 17 VRO OAN OAN O 0 1 N N N -1.155 -13.042 10.645 -5.984 0.303 0.191 OAN VRO 18 VRO CAA CAA C 0 1 N N N -0.678 -11.806 9.942 -6.733 -0.897 0.390 CAA VRO 19 VRO CAI CAI C 0 1 Y N N -3.376 -12.183 10.538 -4.077 -1.095 -0.075 CAI VRO 20 VRO CAG CAG C 0 1 Y N N -4.759 -12.244 10.564 -2.724 -1.231 -0.315 CAG VRO 21 VRO H1 H1 H 0 1 N N N -3.849 -15.823 14.444 2.362 4.015 0.216 H1 VRO 22 VRO H2 H2 H 0 1 N N N -6.839 -9.840 14.193 4.136 -2.674 -0.054 H2 VRO 23 VRO H4 H4 H 0 1 N N N -8.333 -13.844 12.095 -0.054 -1.055 1.194 H4 VRO 24 VRO H5 H5 H 0 1 N N N -6.906 -14.914 12.305 0.105 0.714 1.070 H5 VRO 25 VRO H6 H6 H 0 1 N N N -7.103 -12.474 10.534 -0.116 0.561 -1.395 H6 VRO 26 VRO H7 H7 H 0 1 N N N -7.117 -14.194 10.015 -0.275 -1.207 -1.271 H7 VRO 27 VRO H8 H8 H 0 1 N N N -4.987 -15.580 10.924 -1.895 2.025 -0.633 H8 VRO 28 VRO H9 H9 H 0 1 N N N -2.500 -15.431 11.022 -4.307 2.275 -0.214 H9 VRO 29 VRO H10 H10 H 0 1 N N N 0.421 -11.776 9.958 -6.339 -1.433 1.254 H10 VRO 30 VRO H11 H11 H 0 1 N N N -1.029 -11.818 8.900 -7.780 -0.647 0.564 H11 VRO 31 VRO H12 H12 H 0 1 N N N -1.076 -10.917 10.453 -6.652 -1.527 -0.496 H12 VRO 32 VRO H13 H13 H 0 1 N N N -2.920 -11.222 10.349 -4.689 -1.972 0.078 H13 VRO 33 VRO H14 H14 H 0 1 N N N -5.354 -11.350 10.447 -2.276 -2.213 -0.343 H14 VRO 34 VRO H15 H15 H 0 1 N N N -4.790 -12.929 15.880 4.474 1.315 -0.214 H15 VRO 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VRO CAA OAN SING N N 1 VRO CAI CAG DOUB Y N 2 VRO CAI CAQ SING Y N 3 VRO CAG CAP SING Y N 4 VRO OAN CAQ SING N N 5 VRO CAQ CAH DOUB Y N 6 VRO CAP CAJ SING N N 7 VRO CAP CAF DOUB Y N 8 VRO CAJ CAK SING N N 9 VRO CAF CAH SING Y N 10 VRO CAK CAS SING N N 11 VRO OAD CAU DOUB N N 12 VRO CAS CAU SING N N 13 VRO CAS CAR DOUB N N 14 VRO CAU NAM SING N N 15 VRO CAR CAO SING N N 16 VRO CAR NAL SING N N 17 VRO OAB CAO DOUB N N 18 VRO NAM CAT SING N N 19 VRO CAO OAE SING N N 20 VRO NAL CAT SING N N 21 VRO CAT OAC DOUB N N 22 VRO OAE H1 SING N N 23 VRO NAM H2 SING N N 24 VRO CAK H4 SING N N 25 VRO CAK H5 SING N N 26 VRO CAJ H6 SING N N 27 VRO CAJ H7 SING N N 28 VRO CAF H8 SING N N 29 VRO CAH H9 SING N N 30 VRO CAA H10 SING N N 31 VRO CAA H11 SING N N 32 VRO CAA H12 SING N N 33 VRO CAI H13 SING N N 34 VRO CAG H14 SING N N 35 VRO NAL H15 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VRO SMILES ACDLabs 12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCc2ccc(OC)cc2" VRO InChI InChI 1.03 "InChI=1S/C14H14N2O5/c1-21-9-5-2-8(3-6-9)4-7-10-11(13(18)19)15-14(20)16-12(10)17/h2-3,5-6H,4,7H2,1H3,(H,18,19)(H2,15,16,17,20)" VRO InChIKey InChI 1.03 XBHJLUPPMAQXSR-UHFFFAOYSA-N VRO SMILES_CANONICAL CACTVS 3.370 "COc1ccc(CCC2=C(NC(=O)NC2=O)C(O)=O)cc1" VRO SMILES CACTVS 3.370 "COc1ccc(CCC2=C(NC(=O)NC2=O)C(O)=O)cc1" VRO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COc1ccc(cc1)CCC2=C(NC(=O)NC2=O)C(=O)O" VRO SMILES "OpenEye OEToolkits" 1.7.6 "COc1ccc(cc1)CCC2=C(NC(=O)NC2=O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VRO "SYSTEMATIC NAME" ACDLabs 12.01 "5-[2-(4-methoxyphenyl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" VRO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[2-(4-methoxyphenyl)ethyl]-2,4-bis(oxidanylidene)-1H-pyrimidine-6-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VRO "Create component" 2012-11-29 PDBJ VRO "Initial release" 2013-12-04 RCSB #