data_WAS # _chem_comp.id WAS _chem_comp.name "2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethyl (2-{[(1S,2S,3R,4S,5S)-2,3,4,5-tetrahydroxy-5-(hydroxymethyl)cyclohexyl]amino}ethyl)carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H31 N7 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-05 _chem_comp.pdbx_modified_date 2021-10-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.480 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WAS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KBR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WAS N1 N1 N 0 1 N N N -11.616 23.220 -12.688 4.426 -0.613 0.773 N1 WAS 1 WAS N3 N2 N 0 1 N N N -20.047 24.291 -10.905 -4.134 -0.908 -0.754 N3 WAS 2 WAS C4 C1 C 0 1 N N R -9.040 22.017 -11.468 5.962 1.657 -0.170 C4 WAS 3 WAS C5 C2 C 0 1 N N S -9.178 23.284 -12.318 5.294 1.635 1.207 C5 WAS 4 WAS C6 C3 C 0 1 N N S -10.494 24.014 -12.164 5.216 0.194 1.713 C6 WAS 5 WAS C7 C4 C 0 1 N N N -10.578 23.628 -8.225 8.707 -0.944 0.554 C7 WAS 6 WAS C8 C5 C 0 1 N N N -12.883 23.843 -12.287 2.990 -0.501 1.061 C8 WAS 7 WAS C10 C6 C 0 1 N N N -15.962 22.197 -12.173 -0.123 -1.910 -0.405 C10 WAS 8 WAS C13 C7 C 0 1 Y N N -19.993 25.582 -10.228 -5.411 -0.446 -0.414 C13 WAS 9 WAS C15 C8 C 0 1 Y N N -20.076 26.716 -8.045 -7.567 -0.834 0.564 C15 WAS 10 WAS C17 C9 C 0 1 Y N N -19.851 27.993 -10.113 -7.041 1.314 -0.382 C17 WAS 11 WAS C1 C10 C 0 1 N N N -10.705 24.376 -10.670 6.628 -0.386 1.822 C1 WAS 12 WAS C11 C11 C 0 1 N N N -18.192 22.810 -11.756 -2.343 -2.556 -0.997 C11 WAS 13 WAS C12 C12 C 0 1 N N N -19.273 23.929 -12.100 -3.786 -2.316 -0.547 C12 WAS 14 WAS C14 C13 C 0 1 Y N N -20.101 25.549 -8.796 -6.307 -1.290 0.230 C14 WAS 15 WAS C16 C14 C 0 1 Y N N -19.952 27.947 -8.688 -7.938 0.468 0.256 C16 WAS 16 WAS C18 C15 C 0 1 Y N N -19.870 26.834 -10.878 -5.781 0.858 -0.716 C18 WAS 17 WAS C2 C16 C 0 1 N N S -10.528 23.153 -9.734 7.295 -0.364 0.445 C2 WAS 18 WAS C3 C17 C 0 1 N N S -9.239 22.374 -9.978 7.373 1.077 -0.061 C3 WAS 19 WAS C9 C18 C 0 1 N N N -14.049 23.480 -13.285 2.202 -1.353 0.064 C9 WAS 20 WAS N2 N3 N 0 1 N N N -14.678 22.219 -12.949 0.770 -1.241 0.350 N2 WAS 21 WAS N4 N4 N 1 1 N N N -19.754 27.055 -12.361 -4.824 1.759 -1.397 N4 WAS 22 WAS N5 N5 N 0 1 N N N -19.928 29.192 -7.906 -9.218 0.928 0.589 N5 WAS 23 WAS N6 N6 N 0 1 N N N -18.690 29.838 -7.560 -10.101 0.096 1.217 N6 WAS 24 WAS N7 N7 N 0 1 N N N -18.997 31.042 -6.853 -10.590 0.690 2.451 N7 WAS 25 WAS O1 O1 O 0 1 N N N -9.631 24.638 -8.055 9.372 -0.817 -0.705 O1 WAS 26 WAS O2 O2 O 0 1 N N N -11.608 22.258 -9.936 6.527 -1.149 -0.469 O2 WAS 27 WAS O3 O3 O 0 1 N N N -9.300 21.140 -9.265 7.997 1.098 -1.347 O3 WAS 28 WAS O4 O4 O 0 1 N N N -7.754 21.447 -11.662 6.035 3.004 -0.642 O4 WAS 29 WAS O5 O5 O 0 1 N N N -8.737 23.160 -13.647 3.976 2.177 1.106 O5 WAS 30 WAS O6 O6 O 0 1 N N N -16.968 23.183 -12.376 -1.439 -1.807 -0.142 O6 WAS 31 WAS O7 O7 O 0 1 N N N -16.166 21.340 -11.362 0.260 -2.606 -1.324 O7 WAS 32 WAS O8 O8 O 0 1 N N N -19.358 26.039 -13.305 -4.778 2.938 -1.095 O8 WAS 33 WAS O9 O9 O -1 1 N N N -20.033 28.344 -12.857 -4.083 1.322 -2.259 O9 WAS 34 WAS H1 H1 H 0 1 N N N -11.569 22.292 -12.319 4.723 -1.577 0.786 H1 WAS 35 WAS H3 H3 H 0 1 N N N -21.005 24.165 -11.161 -3.480 -0.296 -1.126 H3 WAS 36 WAS H4 H4 H 0 1 N N N -9.823 21.304 -11.766 5.376 1.059 -0.867 H4 WAS 37 WAS H5 H5 H 0 1 N N N -8.454 23.972 -11.857 5.880 2.234 1.904 H5 WAS 38 WAS H6 H6 H 0 1 N N N -10.433 24.955 -12.731 4.740 0.178 2.694 H6 WAS 39 WAS H7 H7 H 0 1 N N N -11.581 24.014 -7.989 9.265 -0.401 1.316 H7 WAS 40 WAS H8 H8 H 0 1 N N N -10.345 22.783 -7.561 8.647 -1.997 0.829 H8 WAS 41 WAS H9 H9 H 0 1 N N N -12.754 24.935 -12.270 2.794 -0.852 2.074 H9 WAS 42 WAS H10 H10 H 0 1 N N N -13.152 23.490 -11.280 2.682 0.541 0.972 H10 WAS 43 WAS H11 H11 H 0 1 N N N -20.152 26.671 -6.969 -8.263 -1.490 1.065 H11 WAS 44 WAS H12 H12 H 0 1 N N N -19.758 28.950 -10.605 -7.330 2.326 -0.621 H12 WAS 45 WAS H13 H13 H 0 1 N N N -9.973 25.146 -10.387 7.214 0.213 2.519 H13 WAS 46 WAS H14 H14 H 0 1 N N N -11.723 24.773 -10.543 6.572 -1.413 2.182 H14 WAS 47 WAS H15 H15 H 0 1 N N N -18.526 21.836 -12.143 -2.113 -3.619 -0.927 H15 WAS 48 WAS H16 H16 H 0 1 N N N -18.055 22.745 -10.667 -2.225 -2.226 -2.029 H16 WAS 49 WAS H17 H17 H 0 1 N N N -18.758 24.823 -12.481 -3.883 -2.563 0.510 H17 WAS 50 WAS H18 H18 H 0 1 N N N -19.958 23.544 -12.870 -4.458 -2.946 -1.131 H18 WAS 51 WAS H19 H19 H 0 1 N N N -20.204 24.598 -8.294 -6.018 -2.303 0.469 H19 WAS 52 WAS H20 H20 H 0 1 N N N -8.383 22.975 -9.638 7.959 1.676 0.636 H20 WAS 53 WAS H21 H21 H 0 1 N N N -13.637 23.411 -14.303 2.398 -1.001 -0.949 H21 WAS 54 WAS H22 H22 H 0 1 N N N -14.808 24.276 -13.249 2.510 -2.395 0.153 H22 WAS 55 WAS H23 H23 H 0 1 N N N -14.255 21.360 -13.235 0.464 -0.685 1.084 H23 WAS 56 WAS H24 H24 H 0 1 N N N -20.460 29.861 -8.424 -9.478 1.837 0.374 H24 WAS 57 WAS H25 H25 H 0 1 N N N -18.144 29.234 -6.979 -10.866 -0.147 0.605 H25 WAS 58 WAS H26 H26 H 0 1 N N N -18.148 31.508 -6.603 -11.005 1.593 2.278 H26 WAS 59 WAS H27 H27 H 0 1 N N N -19.546 31.640 -7.437 -11.242 0.075 2.914 H27 WAS 60 WAS H28 H28 H 0 1 N N N -9.645 24.938 -7.154 10.274 -1.165 -0.710 H28 WAS 61 WAS H29 H29 H 0 1 N N N -11.507 21.505 -9.366 6.892 -1.180 -1.364 H29 WAS 62 WAS H30 H30 H 0 1 N N N -9.422 21.314 -8.339 8.080 1.982 -1.730 H30 WAS 63 WAS H31 H31 H 0 1 N N N -7.672 20.662 -11.134 5.174 3.435 -0.736 H31 WAS 64 WAS H32 H32 H 0 1 N N N -7.910 22.694 -13.664 3.949 3.091 0.790 H32 WAS 65 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WAS O5 C5 SING N N 1 WAS O8 N4 DOUB N N 2 WAS C9 N2 SING N N 3 WAS C9 C8 SING N N 4 WAS N2 C10 SING N N 5 WAS O9 N4 SING N N 6 WAS N1 C8 SING N N 7 WAS N1 C6 SING N N 8 WAS O6 C10 SING N N 9 WAS O6 C11 SING N N 10 WAS N4 C18 SING N N 11 WAS C5 C6 SING N N 12 WAS C5 C4 SING N N 13 WAS C10 O7 DOUB N N 14 WAS C6 C1 SING N N 15 WAS C12 C11 SING N N 16 WAS C12 N3 SING N N 17 WAS O4 C4 SING N N 18 WAS C4 C3 SING N N 19 WAS N3 C13 SING N N 20 WAS C18 C13 DOUB Y N 21 WAS C18 C17 SING Y N 22 WAS C1 C2 SING N N 23 WAS C13 C14 SING Y N 24 WAS C17 C16 DOUB Y N 25 WAS C3 C2 SING N N 26 WAS C3 O3 SING N N 27 WAS O2 C2 SING N N 28 WAS C2 C7 SING N N 29 WAS C14 C15 DOUB Y N 30 WAS C16 C15 SING Y N 31 WAS C16 N5 SING N N 32 WAS C7 O1 SING N N 33 WAS N5 N6 SING N N 34 WAS N6 N7 SING N N 35 WAS N1 H1 SING N N 36 WAS N3 H3 SING N N 37 WAS C4 H4 SING N N 38 WAS C5 H5 SING N N 39 WAS C6 H6 SING N N 40 WAS C7 H7 SING N N 41 WAS C7 H8 SING N N 42 WAS C8 H9 SING N N 43 WAS C8 H10 SING N N 44 WAS C15 H11 SING N N 45 WAS C17 H12 SING N N 46 WAS C1 H13 SING N N 47 WAS C1 H14 SING N N 48 WAS C11 H15 SING N N 49 WAS C11 H16 SING N N 50 WAS C12 H17 SING N N 51 WAS C12 H18 SING N N 52 WAS C14 H19 SING N N 53 WAS C3 H20 SING N N 54 WAS C9 H21 SING N N 55 WAS C9 H22 SING N N 56 WAS N2 H23 SING N N 57 WAS N5 H24 SING N N 58 WAS N6 H25 SING N N 59 WAS N7 H26 SING N N 60 WAS N7 H27 SING N N 61 WAS O1 H28 SING N N 62 WAS O2 H29 SING N N 63 WAS O3 H30 SING N N 64 WAS O4 H31 SING N N 65 WAS O5 H32 SING N N 66 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WAS SMILES ACDLabs 12.01 "N(CCNC(=O)OCCNc1ccc(cc1[N+](=O)[O-])NNN)C2C(C(C(C(CO)(C2)O)O)O)O" WAS InChI InChI 1.03 "InChI=1S/C18H31N7O9/c19-24-23-10-1-2-11(13(7-10)25(32)33)21-5-6-34-17(30)22-4-3-20-12-8-18(31,9-26)16(29)15(28)14(12)27/h1-2,7,12,14-16,20-21,23-24,26-29,31H,3-6,8-9,19H2,(H,22,30)/t12-,14-,15+,16-,18-/m0/s1" WAS InChIKey InChI 1.03 RDKDXFWNGAUKLV-IJCAJFLPSA-N WAS SMILES_CANONICAL CACTVS 3.385 "NNNc1ccc(NCCOC(=O)NCCN[C@H]2C[C@](O)(CO)[C@@H](O)[C@H](O)[C@H]2O)c(c1)[N+]([O-])=O" WAS SMILES CACTVS 3.385 "NNNc1ccc(NCCOC(=O)NCCN[CH]2C[C](O)(CO)[CH](O)[CH](O)[CH]2O)c(c1)[N+]([O-])=O" WAS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1NNN)[N+](=O)[O-])NCCOC(=O)NCCN[C@H]2C[C@@]([C@H]([C@@H]([C@H]2O)O)O)(CO)O" WAS SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1NNN)[N+](=O)[O-])NCCOC(=O)NCCNC2CC(C(C(C2O)O)O)(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WAS "SYSTEMATIC NAME" ACDLabs 12.01 "2-{[2-nitro-4-(triazan-1-yl)phenyl]amino}ethyl (2-{[(1S,2S,3R,4S,5S)-2,3,4,5-tetrahydroxy-5-(hydroxymethyl)cyclohexyl]amino}ethyl)carbamate" WAS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[4-(2-azanylhydrazinyl)-2-nitro-phenyl]amino]ethyl ~{N}-[2-[[(1~{S},2~{S},3~{R},4~{S},5~{S})-5-(hydroxymethyl)-2,3,4,5-tetrakis(oxidanyl)cyclohexyl]amino]ethyl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WAS "Create component" 2020-10-05 RCSB WAS "Initial release" 2021-10-06 RCSB ##