data_WRK # _chem_comp.id WRK _chem_comp.name "[2,18-bis(2-carboxyethyl)-7,12-diethenyl-3,8,13,17-tetramethyl-21-(2-oxo-3-phenylpropyl)porphyrin-21-iumato(2-)-kappa~3~N~22~,N~23~,N~24~]iron(2+)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C43 H41 Fe N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-10-27 _chem_comp.pdbx_modified_date 2023-12-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 749.654 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WRK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8ESS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WRK CHA C1 C 0 1 N N N N N N 37.923 2.186 11.160 ? ? ? CHA WRK 1 WRK CHB C2 C 0 1 N N N N N N 37.069 5.284 7.577 ? ? ? CHB WRK 2 WRK CHC C3 C 0 1 N N N N N N 32.733 6.324 9.368 ? ? ? CHC WRK 3 WRK CHD C4 C 0 1 N N N N N N 33.612 3.282 13.075 ? ? ? CHD WRK 4 WRK C1A C5 C 0 1 N N N N N N 38.149 3.020 10.062 ? ? ? C1A WRK 5 WRK C2A C6 C 0 1 N N N N N N 39.320 3.020 9.217 ? ? ? C2A WRK 6 WRK C3A C7 C 0 1 N N N N N N 39.079 3.919 8.175 ? ? ? C3A WRK 7 WRK C4A C8 C 0 1 N N N N N N 37.777 4.439 8.374 ? ? ? C4A WRK 8 WRK CMA C9 C 0 1 N N N N N N 40.019 4.279 7.063 ? ? ? CMA WRK 9 WRK CAA C10 C 0 1 N N N N N N 40.545 2.168 9.424 ? ? ? CAA WRK 10 WRK CBA C11 C 0 1 N N N N N N 40.620 0.992 8.433 ? ? ? CBA WRK 11 WRK CGA C12 C 0 1 N N N N N N 39.405 0.102 8.450 ? ? ? CGA WRK 12 WRK O1A O1 O 0 1 N N N N N N 39.215 -0.497 9.584 ? ? ? O1A WRK 13 WRK O2A O2 O 0 1 N N N N N N 38.665 -0.040 7.492 ? ? ? O2A WRK 14 WRK C1B C13 C 0 1 N N N N N N 35.809 5.825 7.676 ? ? ? C1B WRK 15 WRK C2B C14 C 0 1 N N N N N N 35.213 6.800 6.774 ? ? ? C2B WRK 16 WRK C3B C15 C 0 1 N N N N N N 33.996 7.090 7.323 ? ? ? C3B WRK 17 WRK C4B C16 C 0 1 N N N N N N 33.862 6.306 8.517 ? ? ? C4B WRK 18 WRK CMB C17 C 0 1 N N N N N N 35.832 7.302 5.501 ? ? ? CMB WRK 19 WRK CAB C18 C 0 1 N N N N N N 32.974 8.010 6.828 ? ? ? CAB WRK 20 WRK CBB C19 C 0 1 N N N N N N 33.194 9.186 6.259 ? ? ? CBB WRK 21 WRK C1C C20 C 0 1 Y N N N N N 32.609 5.630 10.566 ? ? ? C1C WRK 22 WRK C2C C21 C 0 1 Y N N N N N 31.488 5.770 11.482 ? ? ? C2C WRK 23 WRK C3C C22 C 0 1 Y N N N N N 31.767 4.904 12.528 ? ? ? C3C WRK 24 WRK C4C C23 C 0 1 Y N N N N N 33.006 4.258 12.235 ? ? ? C4C WRK 25 WRK CMC C24 C 0 1 N N N N N N 30.311 6.677 11.278 ? ? ? CMC WRK 26 WRK CAC C25 C 0 1 N N N N N N 31.006 4.646 13.761 ? ? ? CAC WRK 27 WRK CBC C26 C 0 1 N N N N N N 29.890 5.198 14.175 ? ? ? CBC WRK 28 WRK C1D C27 C 0 1 N N N N N N 34.792 2.693 12.876 ? ? ? C1D WRK 29 WRK C2D C28 C 0 1 N N N N N N 35.217 1.348 13.333 ? ? ? C2D WRK 30 WRK C3D C29 C 0 1 N N N N N N 36.448 1.062 12.773 ? ? ? C3D WRK 31 WRK C4D C30 C 0 1 N N N N N N 36.880 2.201 11.991 ? ? ? C4D WRK 32 WRK CMD C31 C 0 1 N N N N N N 34.378 0.422 14.162 ? ? ? CMD WRK 33 WRK CAD C32 C 0 1 N N N N N N 37.190 -0.243 12.883 ? ? ? CAD WRK 34 WRK CBD C33 C 0 1 N N N N N N 36.807 -1.252 11.806 ? ? ? CBD WRK 35 WRK CGD C34 C 0 1 N N N N N N 35.664 -2.140 12.202 ? ? ? CGD WRK 36 WRK O1D O3 O 0 1 N N N N N N 35.802 -3.129 12.890 ? ? ? O1D WRK 37 WRK O2D O4 O 0 1 N N N N N N 34.507 -1.742 11.747 ? ? ? O2D WRK 38 WRK NA N1 N 0 1 N N R N N N 37.226 3.895 9.545 ? ? ? NA WRK 39 WRK NB N2 N 0 1 N N N N N N 34.957 5.553 8.725 ? ? ? NB WRK 40 WRK NC N3 N 0 1 Y N N N N N 33.516 4.707 11.057 ? ? ? NC WRK 41 WRK ND N4 N 0 1 N N N N N N 35.910 3.147 12.210 ? ? ? ND WRK 42 WRK FE FE1 FE 2 0 N N N N N N 35.148 3.979 9.998 ? ? ? FE WRK 43 WRK O1 O5 O 0 1 N N N N N N 37.267 3.806 14.517 ? ? ? O1 WRK 44 WRK C40 C35 C 0 1 N N N N N N 36.330 4.522 12.418 ? ? ? C40 WRK 45 WRK C41 C36 C 0 1 N N N N N N 36.972 4.730 13.792 ? ? ? C41 WRK 46 WRK C43 C37 C 0 1 N N N N N N 37.202 6.164 14.219 ? ? ? C43 WRK 47 WRK C44 C38 C 0 1 Y N N N N N 35.931 6.948 14.001 ? ? ? C44 WRK 48 WRK C45 C39 C 0 1 Y N N N N N 35.790 7.775 12.896 ? ? ? C45 WRK 49 WRK C46 C40 C 0 1 Y N N N N N 34.584 8.394 12.628 ? ? ? C46 WRK 50 WRK C47 C41 C 0 1 Y N N N N N 33.507 8.209 13.465 ? ? ? C47 WRK 51 WRK C48 C42 C 0 1 Y N N N N N 33.637 7.414 14.575 ? ? ? C48 WRK 52 WRK C49 C43 C 0 1 Y N N N N N 34.842 6.787 14.846 ? ? ? C49 WRK 53 WRK H1 H1 H 0 1 N N N N N N 38.681 1.443 11.359 ? ? ? H1 WRK 54 WRK H2 H2 H 0 1 N N N N N N 37.603 5.591 6.690 ? ? ? H2 WRK 55 WRK H3 H3 H 0 1 N N N N N N 31.894 6.930 9.060 ? ? ? H3 WRK 56 WRK H4 H4 H 0 1 N N N N N N 33.064 2.990 13.959 ? ? ? H4 WRK 57 WRK H5 H5 H 0 1 N N N N N N 40.955 3.712 7.175 ? ? ? H5 WRK 58 WRK H6 H6 H 0 1 N N N N N N 39.555 4.033 6.097 ? ? ? H6 WRK 59 WRK H7 H7 H 0 1 N N N N N N 40.237 5.357 7.102 ? ? ? H7 WRK 60 WRK H8 H8 H 0 1 N N N N N N 40.526 1.766 10.448 ? ? ? H8 WRK 61 WRK H9 H9 H 0 1 N N N N N N 41.438 2.797 9.293 ? ? ? H9 WRK 62 WRK H10 H10 H 0 1 N N N N N N 41.500 0.382 8.685 ? ? ? H10 WRK 63 WRK H11 H11 H 0 1 N N N N N N 40.736 1.401 7.418 ? ? ? H11 WRK 64 WRK H12 H12 H 0 1 N N N N N N 38.435 -1.037 9.531 ? ? ? H12 WRK 65 WRK H13 H13 H 0 1 N N N N N N 36.828 6.853 5.375 ? ? ? H13 WRK 66 WRK H14 H14 H 0 1 N N N N N N 35.194 7.024 4.649 ? ? ? H14 WRK 67 WRK H15 H15 H 0 1 N N N N N N 35.926 8.397 5.546 ? ? ? H15 WRK 68 WRK H16 H16 H 0 1 N N N N N N 31.944 7.703 6.936 ? ? ? H16 WRK 69 WRK H17 H17 H 0 1 N N N N N N 32.362 9.790 5.928 ? ? ? H17 WRK 70 WRK H18 H18 H 0 1 N N N N N N 34.205 9.541 6.127 ? ? ? H18 WRK 71 WRK H19 H19 H 0 1 N N N N N N 29.523 6.138 10.732 ? ? ? H19 WRK 72 WRK H20 H20 H 0 1 N N N N N N 29.924 7.001 12.255 ? ? ? H20 WRK 73 WRK H21 H21 H 0 1 N N N N N N 30.623 7.557 10.697 ? ? ? H21 WRK 74 WRK H22 H22 H 0 1 N N N N N N 31.425 3.897 14.417 ? ? ? H22 WRK 75 WRK H23 H23 H 0 1 N N N N N N 29.454 4.894 15.115 ? ? ? H23 WRK 76 WRK H24 H24 H 0 1 N N N N N N 29.408 5.956 13.576 ? ? ? H24 WRK 77 WRK H25 H25 H 0 1 N N N N N N 33.453 0.935 14.464 ? ? ? H25 WRK 78 WRK H26 H26 H 0 1 N N N N N N 34.126 -0.471 13.572 ? ? ? H26 WRK 79 WRK H27 H27 H 0 1 N N N N N N 34.940 0.122 15.059 ? ? ? H27 WRK 80 WRK H28 H28 H 0 1 N N N N N N 36.974 -0.685 13.867 ? ? ? H28 WRK 81 WRK H29 H29 H 0 1 N N N N N N 38.268 -0.039 12.802 ? ? ? H29 WRK 82 WRK H30 H30 H 0 1 N N N N N N 37.682 -1.884 11.593 ? ? ? H30 WRK 83 WRK H31 H31 H 0 1 N N N N N N 36.522 -0.701 10.897 ? ? ? H31 WRK 84 WRK H32 H32 H 0 1 N N N N N N 34.956 -3.539 13.029 ? ? ? H32 WRK 85 WRK H33 H33 H 0 1 N N N N N N 37.061 4.790 11.641 ? ? ? H33 WRK 86 WRK H34 H34 H 0 1 N N N N N N 35.450 5.177 12.335 ? ? ? H34 WRK 87 WRK H35 H35 H 0 1 N N N N N N 37.476 6.193 15.284 ? ? ? H35 WRK 88 WRK H36 H36 H 0 1 N N N N N N 38.014 6.602 13.620 ? ? ? H36 WRK 89 WRK H37 H37 H 0 1 N N N N N N 36.631 7.937 12.239 ? ? ? H37 WRK 90 WRK H38 H38 H 0 1 N N N N N N 34.486 9.026 11.758 ? ? ? H38 WRK 91 WRK H39 H39 H 0 1 N N N N N N 32.563 8.688 13.249 ? ? ? H39 WRK 92 WRK H40 H40 H 0 1 N N N N N N 32.797 7.276 15.240 ? ? ? H40 WRK 93 WRK H41 H41 H 0 1 N N N N N N 34.935 6.166 15.725 ? ? ? H41 WRK 94 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WRK CMB C2B SING N N 1 WRK CBB CAB DOUB N N 2 WRK C2B C3B DOUB N N 3 WRK C2B C1B SING N N 4 WRK CAB C3B SING N N 5 WRK CMA C3A SING N N 6 WRK C3B C4B SING N N 7 WRK O2A CGA DOUB N N 8 WRK CHB C1B SING N N 9 WRK CHB C4A DOUB N N 10 WRK C1B NB DOUB N N 11 WRK C3A C4A SING N N 12 WRK C3A C2A DOUB N N 13 WRK C4A NA SING N N 14 WRK CBA CGA SING N N 15 WRK CBA CAA SING N N 16 WRK CGA O1A SING N N 17 WRK C4B NB SING N N 18 WRK C4B CHC DOUB N N 19 WRK NB FE SING N N 20 WRK C2A CAA SING N N 21 WRK C2A C1A SING N N 22 WRK CHC C1C SING N N 23 WRK NA FE SING N N 24 WRK NA C1A SING N N 25 WRK FE NC SING N N 26 WRK C1A CHA DOUB N Z 27 WRK C1C NC SING Y N 28 WRK C1C C2C DOUB Y N 29 WRK NC C4C SING Y N 30 WRK CHA C4D SING N N 31 WRK CMC C2C SING N N 32 WRK C2C C3C SING Y N 33 WRK O2D CGD DOUB N N 34 WRK CBD CGD SING N N 35 WRK CBD CAD SING N N 36 WRK C4D ND DOUB N N 37 WRK C4D C3D SING N N 38 WRK CGD O1D SING N N 39 WRK ND C40 SING N N 40 WRK ND C1D SING N N 41 WRK C4C C3C DOUB Y N 42 WRK C4C CHD SING N N 43 WRK C40 C41 SING N N 44 WRK C3C CAC SING N N 45 WRK C46 C45 DOUB Y N 46 WRK C46 C47 SING Y N 47 WRK C3D CAD SING N N 48 WRK C3D C2D DOUB N N 49 WRK C1D CHD DOUB N Z 50 WRK C1D C2D SING N N 51 WRK C45 C44 SING Y N 52 WRK C2D CMD SING N N 53 WRK C47 C48 DOUB Y N 54 WRK CAC CBC DOUB N N 55 WRK C41 C43 SING N N 56 WRK C41 O1 DOUB N N 57 WRK C44 C43 SING N N 58 WRK C44 C49 DOUB Y N 59 WRK C48 C49 SING Y N 60 WRK CHA H1 SING N N 61 WRK CHB H2 SING N N 62 WRK CHC H3 SING N N 63 WRK CHD H4 SING N N 64 WRK CMA H5 SING N N 65 WRK CMA H6 SING N N 66 WRK CMA H7 SING N N 67 WRK CAA H8 SING N N 68 WRK CAA H9 SING N N 69 WRK CBA H10 SING N N 70 WRK CBA H11 SING N N 71 WRK O1A H12 SING N N 72 WRK CMB H13 SING N N 73 WRK CMB H14 SING N N 74 WRK CMB H15 SING N N 75 WRK CAB H16 SING N N 76 WRK CBB H17 SING N N 77 WRK CBB H18 SING N N 78 WRK CMC H19 SING N N 79 WRK CMC H20 SING N N 80 WRK CMC H21 SING N N 81 WRK CAC H22 SING N N 82 WRK CBC H23 SING N N 83 WRK CBC H24 SING N N 84 WRK CMD H25 SING N N 85 WRK CMD H26 SING N N 86 WRK CMD H27 SING N N 87 WRK CAD H28 SING N N 88 WRK CAD H29 SING N N 89 WRK CBD H30 SING N N 90 WRK CBD H31 SING N N 91 WRK O1D H32 SING N N 92 WRK C40 H33 SING N N 93 WRK C40 H34 SING N N 94 WRK C43 H35 SING N N 95 WRK C43 H36 SING N N 96 WRK C45 H37 SING N N 97 WRK C46 H38 SING N N 98 WRK C47 H39 SING N N 99 WRK C48 H40 SING N N 100 WRK C49 H41 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WRK SMILES ACDLabs 12.01 "O=C(O)CCC1=C(C)C2=Cc3c(C=C)c(C)c4C=C5C(C=C)=C(C)C=6C=C7C(C)=C(CCC(=O)O)C(=CC1=[N+]2CC(=O)Cc1ccccc1)N7[Fe](n43)N5=6" WRK InChI InChI 1.06 "InChI=1S/C43H42N4O5.Fe/c1-7-30-24(3)34-19-35-26(5)32(14-16-42(49)50)39(46-35)22-41-33(15-17-43(51)52)27(6)40(47(41)23-29(48)18-28-12-10-9-11-13-28)21-38-31(8-2)25(4)36(45-38)20-37(30)44-34;/h7-13,19-22H,1-2,14-18,23H2,3-6H3,(H3,44,45,46,49,50,51,52);/q;+2/p-1/b34-19-,35-19-,36-20-,37-20-,38-21-,39-22-,40-21-,41-22-;" WRK InChIKey InChI 1.06 ISLBRLBQTVPQLF-SCENSBSMSA-M WRK SMILES_CANONICAL CACTVS 3.385 "CC1=C(CCC(O)=O)\C2=C\C3=[N+](CC(=O)Cc4ccccc4)C(=C\c5n6[Fe][N@@]2C1=CC7=NC(=Cc6c(C)c5C=C)C(=C7C)C=C)/C(=C3CCC(O)=O)C" WRK SMILES CACTVS 3.385 "CC1=C(CCC(O)=O)C2=CC3=[N+](CC(=O)Cc4ccccc4)C(=Cc5n6[Fe][N]2C1=CC7=NC(=Cc6c(C)c5C=C)C(=C7C)C=C)C(=C3CCC(O)=O)C" WRK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C=C)/C=C\4/C(=C(C(=[N+]4CC(=O)Cc5ccccc5)/C=C\6/C(=C(C7=CC8=[N]([Fe]3N76)C(=C2)C(=C8C)C=C)C)CCC(=O)O)CCC(=O)O)C" WRK SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C=C)C=C4C(=C(C(=[N+]4CC(=O)Cc5ccccc5)C=C6C(=C(C7=CC8=[N]([Fe]3N76)C(=C2)C(=C8C)C=C)C)CCC(=O)O)CCC(=O)O)C" # _pdbx_chem_comp_identifier.comp_id WRK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "[2,18-bis(2-carboxyethyl)-7,12-diethenyl-3,8,13,17-tetramethyl-21-(2-oxo-3-phenylpropyl)porphyrin-21-iumato(2-)-kappa~3~N~22~,N~23~,N~24~]iron(1+)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WRK "Create component" 2022-10-27 RCSB WRK "Modify formal charge" 2022-11-16 RCSB WRK "Initial release" 2023-12-06 RCSB #