data_WVK # _chem_comp.id WVK _chem_comp.name "(2E)-N-(pyrimidin-2-yl)-3-(thiophen-2-yl)prop-2-enamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H9 N3 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-16 _chem_comp.pdbx_modified_date 2024-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.274 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WVK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UK6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WVK S S1 S 0 1 Y N N N N N 55.630 18.163 14.253 3.688 1.191 -0.000 S WVK 1 WVK C1 C1 C 0 1 N N N N N N 55.097 21.356 13.484 0.737 0.163 0.000 C1 WVK 2 WVK N1 N1 N 0 1 Y N N N N N 55.167 24.312 9.896 -3.835 1.379 0.000 N1 WVK 3 WVK C2 C2 C 0 1 N N N N N N 55.024 20.841 14.708 1.689 -0.805 0.000 C2 WVK 4 WVK N2 N2 N 0 1 Y N N N N N 54.759 25.401 11.992 -3.256 -0.859 -0.000 N2 WVK 5 WVK C3 C3 C 0 1 Y N N N N N 55.192 19.508 15.233 3.059 -0.450 0.000 C3 WVK 6 WVK C4 C4 C 0 1 Y N N N N N 55.086 19.139 16.559 4.109 -1.332 0.000 C4 WVK 7 WVK C5 C5 C 0 1 Y N N N N N 55.376 17.761 16.756 5.336 -0.713 -0.000 C5 WVK 8 WVK C6 C6 C 0 1 Y N N N N N 55.681 17.126 15.606 5.298 0.625 -0.000 C6 WVK 9 WVK C7 C7 C 0 1 Y N N N N N 54.961 24.319 11.222 -2.920 0.422 0.000 C7 WVK 10 WVK C8 C8 C 0 1 Y N N N N N 55.194 25.518 9.311 -5.124 1.082 0.000 C8 WVK 11 WVK C9 C9 C 0 1 Y N N N N N 55.018 26.697 10.000 -5.511 -0.249 -0.000 C9 WVK 12 WVK N N3 N 0 1 N N N N N N 55.037 23.093 11.858 -1.576 0.769 0.000 N WVK 13 WVK C C10 C 0 1 N N N N N N 54.907 22.788 13.170 -0.631 -0.192 0.000 C WVK 14 WVK O O1 O 0 1 N N N N N N 54.632 23.633 14.035 -0.957 -1.365 0.000 O WVK 15 WVK C10 C11 C 0 1 Y N N N N N 54.799 26.579 11.353 -4.527 -1.225 -0.001 C10 WVK 16 WVK H1 H1 H 0 1 N N N N N N 55.309 20.684 12.666 1.026 1.203 0.000 H1 WVK 17 WVK H2 H2 H 0 1 N N N N N N 54.790 21.573 15.467 1.400 -1.846 0.000 H2 WVK 18 WVK H3 H3 H 0 1 N N N N N N 54.814 19.818 17.354 3.984 -2.405 0.001 H3 WVK 19 WVK H4 H4 H 0 1 N N N N N N 55.354 17.276 17.721 6.263 -1.266 0.000 H4 WVK 20 WVK H5 H5 H 0 1 N N N N N N 55.930 16.077 15.548 6.170 1.262 -0.001 H5 WVK 21 WVK H6 H6 H 0 1 N N N N N N 55.362 25.567 8.245 -5.866 1.867 0.001 H6 WVK 22 WVK H7 H7 H 0 1 N N N N N N 55.050 27.658 9.507 -6.557 -0.520 0.000 H7 WVK 23 WVK H8 H8 H 0 1 N N N N N N 55.215 22.314 11.257 -1.317 1.704 0.000 H8 WVK 24 WVK H9 H9 H 0 1 N N N N N N 54.652 27.480 11.929 -4.795 -2.271 -0.001 H9 WVK 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WVK C8 N1 DOUB Y N 1 WVK C8 C9 SING Y N 2 WVK N1 C7 SING Y N 3 WVK C9 C10 DOUB Y N 4 WVK C7 N SING N N 5 WVK C7 N2 DOUB Y N 6 WVK C10 N2 SING Y N 7 WVK N C SING N N 8 WVK C C1 SING N N 9 WVK C O DOUB N N 10 WVK C1 C2 DOUB N E 11 WVK S C3 SING Y N 12 WVK S C6 SING Y N 13 WVK C2 C3 SING N N 14 WVK C3 C4 DOUB Y N 15 WVK C6 C5 DOUB Y N 16 WVK C4 C5 SING Y N 17 WVK C1 H1 SING N N 18 WVK C2 H2 SING N N 19 WVK C4 H3 SING N N 20 WVK C5 H4 SING N N 21 WVK C6 H5 SING N N 22 WVK C8 H6 SING N N 23 WVK C9 H7 SING N N 24 WVK N H8 SING N N 25 WVK C10 H9 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WVK SMILES ACDLabs 12.01 "O=C(/C=C/c1cccs1)Nc1ncccn1" WVK InChI InChI 1.06 "InChI=1S/C11H9N3OS/c15-10(5-4-9-3-1-8-16-9)14-11-12-6-2-7-13-11/h1-8H,(H,12,13,14,15)/b5-4+" WVK InChIKey InChI 1.06 YHXZJZATPFHLGR-SNAWJCMRSA-N WVK SMILES_CANONICAL CACTVS 3.385 "O=C(Nc1ncccn1)\C=C\c2sccc2" WVK SMILES CACTVS 3.385 "O=C(Nc1ncccn1)C=Cc2sccc2" WVK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)/C=C/C(=O)Nc2ncccn2" WVK SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)C=CC(=O)Nc2ncccn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WVK "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-N-(pyrimidin-2-yl)-3-(thiophen-2-yl)prop-2-enamide" WVK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{E})-~{N}-pyrimidin-2-yl-3-thiophen-2-yl-prop-2-enamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WVK "Create component" 2023-10-16 RCSB WVK "Initial release" 2024-03-06 RCSB #