data_X2S # _chem_comp.id X2S _chem_comp.name "4-(3-chloro-5-cyanophenoxy)-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H13 Cl F N3 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-23 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.839 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X2S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KRD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X2S N N1 N 0 1 N N N 469.085 -16.696 129.273 -4.853 -2.117 -3.764 N X2S 1 X2S C C1 C 0 1 N N N 468.613 -16.350 128.290 -4.544 -1.910 -2.691 C X2S 2 X2S O O1 O 0 1 N N N 467.202 -17.160 123.728 -1.163 -0.813 0.573 O X2S 3 X2S C1 C2 C 0 1 Y N N 467.984 -15.887 127.076 -4.155 -1.649 -1.337 C1 X2S 4 X2S C10 C3 C 0 1 Y N N 465.493 -16.724 120.525 1.224 1.844 -0.161 C10 X2S 5 X2S C11 C4 C 0 1 Y N N 465.825 -17.194 121.782 0.704 0.644 0.295 C11 X2S 6 X2S C12 C5 C 0 1 N N N 463.931 -18.107 122.972 2.893 0.091 1.041 C12 X2S 7 X2S C13 C6 C 0 1 N N N 463.200 -19.431 122.882 3.641 -1.043 1.746 C13 X2S 8 X2S C14 C7 C 0 1 N N N 464.674 -20.493 124.551 2.609 -3.142 1.015 C14 X2S 9 X2S C15 C8 C 0 1 N N N 465.404 -21.514 125.037 2.598 -4.242 0.232 C15 X2S 10 X2S C16 C9 C 0 1 N N N 465.518 -22.724 124.281 3.651 -4.439 -0.694 C16 X2S 11 X2S C17 C10 C 0 1 N N N 464.092 -21.689 122.544 4.621 -2.434 0.009 C17 X2S 12 X2S C18 C11 C 0 1 Y N N 468.000 -16.699 125.937 -2.826 -1.350 -1.036 C18 X2S 13 X2S C2 C12 C 0 1 Y N N 467.296 -14.685 127.066 -5.106 -1.688 -0.315 C2 X2S 14 X2S C3 C13 C 0 1 Y N N 466.607 -14.311 125.932 -4.728 -1.435 0.988 C3 X2S 15 X2S C4 C14 C 0 1 Y N N 466.587 -15.100 124.797 -3.408 -1.144 1.286 C4 X2S 16 X2S C5 C15 C 0 1 Y N N 467.284 -16.295 124.818 -2.457 -1.099 0.275 C5 X2S 17 X2S C6 C16 C 0 1 Y N N 466.986 -16.724 122.423 -0.650 0.366 0.127 C6 X2S 18 X2S C7 C17 C 0 1 Y N N 467.852 -15.875 121.748 -1.474 1.289 -0.494 C7 X2S 19 X2S C8 C18 C 0 1 Y N N 467.540 -15.450 120.467 -0.953 2.487 -0.949 C8 X2S 20 X2S C9 C19 C 0 1 Y N N 466.344 -15.840 119.881 0.394 2.769 -0.778 C9 X2S 21 X2S N1 N2 N 0 1 N N N 464.029 -20.566 123.348 3.629 -2.237 0.897 N1 X2S 22 X2S N2 N3 N 0 1 N N N 464.847 -22.714 123.076 4.640 -3.527 -0.776 N2 X2S 23 X2S O1 O2 O 0 1 N N N 465.931 -15.249 118.652 0.904 3.947 -1.225 O1 X2S 24 X2S O2 O3 O 0 1 N N N 463.628 -14.494 119.282 1.084 6.277 -0.915 O2 X2S 25 X2S O3 O4 O 0 1 N N N 464.251 -14.665 116.929 -0.300 4.843 0.593 O3 X2S 26 X2S O4 O5 O 0 1 N N N 465.219 -18.267 122.375 1.515 -0.262 0.904 O4 X2S 27 X2S O5 O6 O 0 1 N N N 466.145 -23.741 124.628 3.662 -5.424 -1.410 O5 X2S 28 X2S O6 O7 O 0 1 N N N 463.540 -21.777 121.465 5.520 -1.619 -0.076 O6 X2S 29 X2S S S1 S 0 1 N N N 464.579 -14.389 118.261 0.857 5.071 -0.199 S X2S 30 X2S CL CL1 CL 0 0 N N N 465.723 -12.814 125.933 -5.911 -1.483 2.258 CL X2S 31 X2S H1 H1 H 0 1 N N N 464.578 -17.043 120.049 2.274 2.062 -0.032 H1 X2S 32 X2S H2 H2 H 0 1 N N N 464.043 -17.814 124.026 2.978 1.003 1.631 H2 X2S 33 X2S H3 H3 H 0 1 N N N 463.365 -17.332 122.434 3.326 0.254 0.055 H3 X2S 34 X2S H4 H4 H 0 1 N N N 462.294 -19.377 123.503 4.672 -0.739 1.930 H4 X2S 35 X2S H5 H5 H 0 1 N N N 462.916 -19.607 121.834 3.153 -1.266 2.694 H5 X2S 36 X2S H6 H6 H 0 1 N N N 464.595 -19.585 125.131 1.815 -2.974 1.727 H6 X2S 37 X2S H7 H7 H 0 1 N N N 465.901 -21.421 125.992 1.797 -4.962 0.312 H7 X2S 38 X2S H8 H8 H 0 1 N N N 468.559 -17.623 125.928 -2.087 -1.315 -1.823 H8 X2S 39 X2S H9 H9 H 0 1 N N N 467.299 -14.047 127.938 -6.137 -1.914 -0.544 H9 X2S 40 X2S H10 H10 H 0 1 N N N 466.042 -14.792 123.917 -3.117 -0.947 2.307 H10 X2S 41 X2S H11 H11 H 0 1 N N N 468.766 -15.547 122.220 -2.524 1.074 -0.624 H11 X2S 42 X2S H12 H12 H 0 1 N N N 468.226 -14.816 119.925 -1.597 3.206 -1.433 H12 X2S 43 X2S H13 H13 H 0 1 N N N 464.916 -23.545 122.524 5.362 -3.654 -1.411 H13 X2S 44 X2S F1 F1 F 0 1 N Y N 464.820 -12.973 118.602 2.122 4.877 0.777 F1 X2S 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X2S O3 S DOUB N N 1 X2S S O1 SING N N 2 X2S S O2 DOUB N N 3 X2S O1 C9 SING N N 4 X2S C9 C8 DOUB Y N 5 X2S C9 C10 SING Y N 6 X2S C8 C7 SING Y N 7 X2S C10 C11 DOUB Y N 8 X2S O6 C17 DOUB N N 9 X2S C7 C6 DOUB Y N 10 X2S C11 O4 SING N N 11 X2S C11 C6 SING Y N 12 X2S O4 C12 SING N N 13 X2S C6 O SING N N 14 X2S C17 N2 SING N N 15 X2S C17 N1 SING N N 16 X2S C13 C12 SING N N 17 X2S C13 N1 SING N N 18 X2S N2 C16 SING N N 19 X2S N1 C14 SING N N 20 X2S O C5 SING N N 21 X2S C16 O5 DOUB N N 22 X2S C16 C15 SING N N 23 X2S C14 C15 DOUB N N 24 X2S C4 C5 DOUB Y N 25 X2S C4 C3 SING Y N 26 X2S C5 C18 SING Y N 27 X2S C3 CL SING N N 28 X2S C3 C2 DOUB Y N 29 X2S C18 C1 DOUB Y N 30 X2S C2 C1 SING Y N 31 X2S C1 C SING N N 32 X2S C N TRIP N N 33 X2S C10 H1 SING N N 34 X2S C12 H2 SING N N 35 X2S C12 H3 SING N N 36 X2S C13 H4 SING N N 37 X2S C13 H5 SING N N 38 X2S C14 H6 SING N N 39 X2S C15 H7 SING N N 40 X2S C18 H8 SING N N 41 X2S C2 H9 SING N N 42 X2S C4 H10 SING N N 43 X2S C7 H11 SING N N 44 X2S C8 H12 SING N N 45 X2S N2 H13 SING N N 46 X2S S F1 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X2S SMILES ACDLabs 12.01 "N#Cc3cc(Oc1c(cc(cc1)OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)cc(c3)Cl" X2S InChI InChI 1.03 "InChI=1S/C19H13ClFN3O7S/c20-13-7-12(11-22)8-15(9-13)30-16-2-1-14(31-32(21,27)28)10-17(16)29-6-5-24-4-3-18(25)23-19(24)26/h1-4,7-10H,5-6H2,(H,23,25,26)" X2S InChIKey InChI 1.03 RUICQBSNQUGNNJ-UHFFFAOYSA-N X2S SMILES_CANONICAL CACTVS 3.385 "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=CC(=O)NC3=O)c1" X2S SMILES CACTVS 3.385 "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=CC(=O)NC3=O)c1" X2S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C#N" X2S SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X2S "SYSTEMATIC NAME" ACDLabs 12.01 "4-(3-chloro-5-cyanophenoxy)-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate" X2S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[2-[2-(3-chloranyl-5-cyano-phenoxy)-5-fluorosulfonyloxy-phenoxy]ethyl]-2,4-bis(oxidanylidene)pyrimidine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X2S "Create component" 2020-11-23 RCSB X2S "Initial release" 2021-01-13 RCSB ##