data_X5W # _chem_comp.id X5W _chem_comp.name "[3-[(4,7-dimethoxyquinolin-2-yl)carbonylamino]-5-[methyl-(phenylmethyl)carbamoyl]phenyl]-oxidanyl-oxidanylidene-boron" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H25 B N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-02 _chem_comp.pdbx_modified_date 2024-02-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 498.315 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X5W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8SYC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X5W C10 C1 C 0 1 Y N N N N N -15.189 30.982 4.219 -3.807 1.390 1.248 C10 X5W 1 X5W N12 N1 N 0 1 Y N N N N N -15.908 29.519 2.515 -3.373 -0.371 -0.285 N12 X5W 2 X5W C13 C2 C 0 1 Y N N N N N -14.714 28.809 2.556 -4.638 -0.790 -0.213 C13 X5W 3 X5W C15 C3 C 0 1 N N N N N N -17.517 31.286 3.207 -1.533 1.093 0.287 C15 X5W 4 X5W C20 C4 C 0 1 Y N N N N N -21.586 32.252 0.502 2.171 2.699 -0.940 C20 X5W 5 X5W C21 C5 C 0 1 Y N N N N N -22.185 32.933 1.566 3.214 1.790 -1.113 C21 X5W 6 X5W C22 C6 C 0 1 Y N N N N N -21.567 32.976 2.809 2.951 0.422 -1.089 C22 X5W 7 X5W C24 C7 C 0 1 N N N N N N -22.209 33.660 4.024 4.054 -0.547 -1.271 C24 X5W 8 X5W C28 C8 C 0 1 N N N N N N -22.169 35.088 6.098 5.178 -2.634 -0.709 C28 X5W 9 X5W C01 C9 C 0 1 N N N N N N -14.294 25.576 -0.207 -8.156 -3.769 -1.448 C01 X5W 10 X5W O02 O1 O 0 1 N N N N N N -13.283 25.847 0.742 -6.785 -3.388 -1.584 O02 X5W 11 X5W C03 C10 C 0 1 Y N N N N N -13.386 26.941 1.648 -6.371 -2.312 -0.865 C03 X5W 12 X5W C04 C11 C 0 1 Y N N N N N -12.327 27.294 2.532 -7.281 -1.640 -0.042 C04 X5W 13 X5W C05 C12 C 0 1 Y N N N N N -12.472 28.375 3.411 -6.892 -0.563 0.693 C05 X5W 14 X5W C06 C13 C 0 1 Y N N N N N -13.701 29.151 3.422 -5.564 -0.116 0.623 C06 X5W 15 X5W C07 C14 C 0 1 Y N N N N N -13.944 30.290 4.296 -5.130 1.005 1.365 C07 X5W 16 X5W O08 O2 O 0 1 N N N N N N -12.939 30.685 5.201 -5.986 1.684 2.169 O08 X5W 17 X5W C09 C15 C 0 1 N N N N N N -13.228 31.766 6.042 -5.456 2.804 2.881 C09 X5W 18 X5W C11 C16 C 0 1 Y N N N N N -16.167 30.557 3.304 -2.950 0.672 0.406 C11 X5W 19 X5W C14 C17 C 0 1 Y N N N N N -14.557 27.698 1.671 -5.071 -1.903 -0.956 C14 X5W 20 X5W O16 O3 O 0 1 N N N N N N -17.752 32.098 4.043 -1.129 2.050 0.916 O16 X5W 21 X5W N17 N2 N 0 1 N N N N N N -18.463 30.941 2.131 -0.694 0.413 -0.520 N17 X5W 22 X5W C18 C18 C 0 1 Y N N N N N -19.754 31.612 1.959 0.612 0.873 -0.718 C18 X5W 23 X5W C19 C19 C 0 1 Y N N N N N -20.367 31.593 0.708 0.869 2.236 -0.742 C19 X5W 24 X5W C23 C20 C 0 1 Y N N N N N -20.368 32.301 3.003 1.647 -0.034 -0.890 C23 X5W 25 X5W O25 O4 O 0 1 N N N N N N -23.332 33.375 4.282 4.974 -0.286 -2.022 O25 X5W 26 X5W N26 N3 N 0 1 N N N N N N -21.491 34.561 4.919 4.039 -1.719 -0.606 N26 X5W 27 X5W C27 C21 C 0 1 N N N N N N -20.108 34.922 4.666 2.884 -2.077 0.221 C27 X5W 28 X5W C29 C22 C 0 1 Y N N N N N -22.125 33.979 7.184 6.175 -2.320 0.376 C29 X5W 29 X5W C30 C23 C 0 1 Y N N N N N -23.311 33.406 7.668 6.080 -2.945 1.605 C30 X5W 30 X5W C31 C24 C 0 1 Y N N N N N -23.275 32.402 8.640 6.995 -2.657 2.600 C31 X5W 31 X5W C32 C25 C 0 1 Y N N N N N -22.052 31.960 9.131 8.005 -1.743 2.366 C32 X5W 32 X5W C33 C26 C 0 1 Y N N N N N -20.861 32.509 8.657 8.101 -1.118 1.137 C33 X5W 33 X5W C34 C27 C 0 1 Y N N N N N -20.899 33.512 7.687 7.189 -1.410 0.140 C34 X5W 34 X5W B35 B1 B 0 1 N N N N N N -22.330 32.254 -0.899 2.463 4.242 -0.961 B35 X5W 35 X5W O36 O5 O 0 1 N N N N N N -21.827 31.601 -1.949 3.648 4.662 -1.140 O36 X5W 36 X5W O37 O6 O 0 1 N N N N N N -23.499 32.893 -1.081 1.401 5.167 -0.778 O37 X5W 37 X5W H1 H1 H 0 1 N N N N N N -15.379 31.829 4.861 -3.438 2.242 1.799 H1 X5W 38 X5W H2 H2 H 0 1 N N N N N N -23.134 33.428 1.421 4.222 2.145 -1.266 H2 X5W 39 X5W H3 H3 H 0 1 N N N N N N -21.653 35.990 6.459 4.830 -3.661 -0.596 H3 X5W 40 X5W H4 H4 H 0 1 N N N N N N -23.213 35.336 5.854 5.652 -2.516 -1.684 H4 X5W 41 X5W H5 H5 H 0 1 N N N N N N -14.014 24.693 -0.800 -8.354 -4.640 -2.073 H5 X5W 42 X5W H6 H6 H 0 1 N N N N N N -15.243 25.381 0.314 -8.363 -4.015 -0.407 H6 X5W 43 X5W H7 H7 H 0 1 N N N N N N -14.413 26.443 -0.874 -8.795 -2.944 -1.761 H7 X5W 44 X5W H8 H8 H 0 1 N N N N N N -11.408 26.726 2.525 -8.304 -1.983 0.014 H8 X5W 45 X5W H9 H9 H 0 1 N N N N N N -11.667 28.633 4.083 -7.604 -0.053 1.325 H9 X5W 46 X5W H10 H10 H 0 1 N N N N N N -12.364 31.967 6.692 -6.244 3.256 3.484 H10 X5W 47 X5W H11 H11 H 0 1 N N N N N N -13.443 32.657 5.433 -4.646 2.472 3.529 H11 X5W 48 X5W H12 H12 H 0 1 N N N N N N -14.104 31.524 6.661 -5.076 3.539 2.171 H12 X5W 49 X5W H13 H13 H 0 1 N N N N N N -15.365 27.438 1.003 -4.379 -2.431 -1.595 H13 X5W 50 X5W H14 H14 H 0 1 N N N N N N -18.212 30.216 1.489 -0.996 -0.396 -0.962 H14 X5W 51 X5W H15 H15 H 0 1 N N N N N N -19.898 31.066 -0.110 0.061 2.940 -0.608 H15 X5W 52 X5W H16 H16 H 0 1 N N N N N N -19.905 32.311 3.978 1.443 -1.095 -0.871 H16 X5W 53 X5W H17 H17 H 0 1 N N N N N N -19.757 35.606 5.453 2.155 -2.615 -0.386 H17 X5W 54 X5W H18 H18 H 0 1 N N N N N N -19.487 34.014 4.665 3.209 -2.711 1.045 H18 X5W 55 X5W H19 H19 H 0 1 N N N N N N -20.032 35.420 3.688 2.427 -1.170 0.619 H19 X5W 56 X5W H20 H20 H 0 1 N N N N N N -24.262 33.745 7.285 5.290 -3.659 1.788 H20 X5W 57 X5W H21 H21 H 0 1 N N N N N N -24.194 31.971 9.008 6.920 -3.145 3.561 H21 X5W 58 X5W H22 H22 H 0 1 N N N N N N -22.024 31.187 9.884 8.720 -1.518 3.144 H22 X5W 59 X5W H23 H23 H 0 1 N N N N N N -19.913 32.160 9.039 8.890 -0.404 0.955 H23 X5W 60 X5W H24 H24 H 0 1 N N N N N N -19.975 33.934 7.319 7.266 -0.924 -0.821 H24 X5W 61 X5W H25 H25 H 0 1 N N N N N N -23.792 32.769 -1.976 1.630 6.107 -0.799 H25 X5W 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X5W O36 B35 DOUB N N 1 X5W O37 B35 SING N N 2 X5W B35 C20 SING N N 3 X5W C01 O02 SING N N 4 X5W C20 C19 DOUB Y N 5 X5W C20 C21 SING Y N 6 X5W C19 C18 SING Y N 7 X5W O02 C03 SING N N 8 X5W C21 C22 DOUB Y N 9 X5W C03 C14 DOUB Y N 10 X5W C03 C04 SING Y N 11 X5W C14 C13 SING Y N 12 X5W C18 N17 SING N N 13 X5W C18 C23 DOUB Y N 14 X5W N17 C15 SING N N 15 X5W N12 C13 SING Y N 16 X5W N12 C11 DOUB Y N 17 X5W C04 C05 DOUB Y N 18 X5W C13 C06 DOUB Y N 19 X5W C22 C23 SING Y N 20 X5W C22 C24 SING N N 21 X5W C15 C11 SING N N 22 X5W C15 O16 DOUB N N 23 X5W C11 C10 SING Y N 24 X5W C05 C06 SING Y N 25 X5W C06 C07 SING Y N 26 X5W C24 O25 DOUB N N 27 X5W C24 N26 SING N N 28 X5W C10 C07 DOUB Y N 29 X5W C07 O08 SING N N 30 X5W C27 N26 SING N N 31 X5W N26 C28 SING N N 32 X5W O08 C09 SING N N 33 X5W C28 C29 SING N N 34 X5W C29 C30 DOUB Y N 35 X5W C29 C34 SING Y N 36 X5W C30 C31 SING Y N 37 X5W C34 C33 DOUB Y N 38 X5W C31 C32 DOUB Y N 39 X5W C33 C32 SING Y N 40 X5W C10 H1 SING N N 41 X5W C21 H2 SING N N 42 X5W C28 H3 SING N N 43 X5W C28 H4 SING N N 44 X5W C01 H5 SING N N 45 X5W C01 H6 SING N N 46 X5W C01 H7 SING N N 47 X5W C04 H8 SING N N 48 X5W C05 H9 SING N N 49 X5W C09 H10 SING N N 50 X5W C09 H11 SING N N 51 X5W C09 H12 SING N N 52 X5W C14 H13 SING N N 53 X5W N17 H14 SING N N 54 X5W C19 H15 SING N N 55 X5W C23 H16 SING N N 56 X5W C27 H17 SING N N 57 X5W C27 H18 SING N N 58 X5W C27 H19 SING N N 59 X5W C30 H20 SING N N 60 X5W C31 H21 SING N N 61 X5W C32 H22 SING N N 62 X5W C33 H23 SING N N 63 X5W C34 H24 SING N N 64 X5W O37 H25 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X5W InChI InChI 1.06 "InChI=1S/C27H25BN3O6/c1-31(16-17-7-5-4-6-8-17)27(33)18-11-19(28(34)35)13-20(12-18)29-26(32)24-15-25(37-3)22-10-9-21(36-2)14-23(22)30-24/h4-15,34H,16H2,1-3H3,(H,29,32)" X5W InChIKey InChI 1.06 ZSCFNVNMTWBBBO-UHFFFAOYSA-N X5W SMILES_CANONICAL CACTVS 3.385 "COc1ccc2c(OC)cc(nc2c1)C(=O)Nc3cc(cc(c3)C(=O)N(C)Cc4ccccc4)[B](O)=O" X5W SMILES CACTVS 3.385 "COc1ccc2c(OC)cc(nc2c1)C(=O)Nc3cc(cc(c3)C(=O)N(C)Cc4ccccc4)[B](O)=O" X5W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(=O)(c1cc(cc(c1)NC(=O)c2cc(c3ccc(cc3n2)OC)OC)C(=O)N(C)Cc4ccccc4)O" X5W SMILES "OpenEye OEToolkits" 2.0.7 "B(=O)(c1cc(cc(c1)NC(=O)c2cc(c3ccc(cc3n2)OC)OC)C(=O)N(C)Cc4ccccc4)O" # _pdbx_chem_comp_identifier.comp_id X5W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[3-[(4,7-dimethoxyquinolin-2-yl)carbonylamino]-5-[methyl-(phenylmethyl)carbamoyl]phenyl]-oxidanyl-oxidanylidene-boron" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X5W "Create component" 2023-06-02 RCSB X5W "Initial release" 2024-02-07 RCSB #