data_X88 # _chem_comp.id X88 _chem_comp.name "5-nitro-2-[(pyrazin-2-ylmethyl)amino]benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H11 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-03-23 _chem_comp.pdbx_modified_date 2012-08-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 273.247 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X88 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3R7E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X88 C1 C1 C 0 1 Y N N 65.423 45.170 -46.367 -1.003 -1.511 -0.024 C1 X88 1 X88 C2 C2 C 0 1 Y N N 66.709 44.735 -45.959 -2.373 -1.670 -0.033 C2 X88 2 X88 C3 C3 C 0 1 Y N N 67.845 44.832 -46.828 -3.208 -0.563 -0.005 C3 X88 3 X88 C4 C4 C 0 1 Y N N 67.631 45.397 -48.141 -2.679 0.708 0.031 C4 X88 4 X88 C5 C5 C 0 1 Y N N 66.332 45.859 -48.608 -1.293 0.885 0.041 C5 X88 5 X88 C6 C6 C 0 1 Y N N 65.176 45.739 -47.688 -0.450 -0.236 0.013 C6 X88 6 X88 N7 N7 N 0 1 N N N 63.953 46.130 -48.073 0.929 -0.074 0.022 N7 X88 7 X88 C8 C8 C 0 1 N N N 66.231 46.357 -49.915 -0.719 2.243 0.079 C8 X88 8 X88 N9 N9 N 0 1 N N N 67.076 45.977 -50.924 -1.526 3.318 -0.015 N9 X88 9 X88 O10 O10 O 0 1 N N N 65.263 47.234 -50.242 0.482 2.393 0.195 O10 X88 10 X88 N11 N11 N 1 1 N N N 69.072 44.409 -46.437 -4.677 -0.749 -0.016 N11 X88 11 X88 O12 O12 O -1 1 N N N 70.145 44.493 -47.250 -5.148 -1.872 -0.048 O12 X88 12 X88 O13 O13 O 0 1 N N N 69.260 43.932 -45.331 -5.413 0.220 0.008 O13 X88 13 X88 C14 C14 C 0 1 N N N 62.699 46.064 -47.288 1.805 -1.238 -0.130 C14 X88 14 X88 C15 C15 C 0 1 Y N N 61.982 49.453 -44.671 5.800 -0.016 0.044 C15 X88 15 X88 N16 N16 N 0 1 Y N N 62.868 49.562 -45.724 5.207 -0.446 1.144 N16 X88 16 X88 C17 C17 C 0 1 Y N N 63.133 48.519 -46.587 3.945 -0.836 1.106 C17 X88 17 X88 C18 C18 C 0 1 Y N N 62.468 47.273 -46.386 3.244 -0.794 -0.086 C18 X88 18 X88 N19 N19 N 0 1 Y N N 61.576 47.174 -45.321 3.837 -0.364 -1.186 N19 X88 19 X88 C20 C20 C 0 1 Y N N 61.317 48.226 -44.462 5.099 0.026 -1.148 C20 X88 20 X88 H1 H1 H 0 1 N N N 64.598 45.077 -45.677 -0.359 -2.378 -0.041 H1 X88 21 X88 H2 H2 H 0 1 N N N 66.836 44.321 -44.970 -2.798 -2.662 -0.062 H2 X88 22 X88 H4 H4 H 0 1 N N N 68.476 45.480 -48.808 -3.334 1.566 0.051 H4 X88 23 X88 HN7 HN7 H 0 1 N N N 64.063 47.105 -48.268 1.312 0.811 0.129 HN7 X88 24 X88 HN9 HN9 H 0 1 N N N 66.955 46.349 -51.844 -2.485 3.199 -0.108 HN9 X88 25 X88 HN9A HN9A H 0 0 N N N 67.814 45.328 -50.740 -1.149 4.212 0.010 HN9A X88 26 X88 H14 H14 H 0 1 N N N 61.858 46.002 -47.995 1.617 -1.942 0.681 H14 X88 27 X88 H14A H14A H 0 0 N N N 62.743 45.168 -46.651 1.603 -1.723 -1.086 H14A X88 28 X88 H15 H15 H 0 1 N N N 61.801 50.293 -44.017 6.830 0.306 0.077 H15 X88 29 X88 H17 H17 H 0 1 N N N 63.832 48.644 -47.401 3.461 -1.187 2.005 H17 X88 30 X88 H20 H20 H 0 1 N N N 60.619 48.111 -43.646 5.583 0.377 -2.047 H20 X88 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X88 C1 C2 DOUB Y N 1 X88 C1 C6 SING Y N 2 X88 C1 H1 SING N N 3 X88 C2 C3 SING Y N 4 X88 C2 H2 SING N N 5 X88 C3 C4 DOUB Y N 6 X88 C3 N11 SING N N 7 X88 C4 C5 SING Y N 8 X88 C4 H4 SING N N 9 X88 C5 C6 DOUB Y N 10 X88 C5 C8 SING N N 11 X88 C6 N7 SING N N 12 X88 N7 C14 SING N N 13 X88 N7 HN7 SING N N 14 X88 C8 N9 SING N N 15 X88 C8 O10 DOUB N N 16 X88 N9 HN9 SING N N 17 X88 N9 HN9A SING N N 18 X88 N11 O12 SING N N 19 X88 N11 O13 DOUB N N 20 X88 C14 C18 SING N N 21 X88 C14 H14 SING N N 22 X88 C14 H14A SING N N 23 X88 C15 N16 DOUB Y N 24 X88 C15 C20 SING Y N 25 X88 C15 H15 SING N N 26 X88 N16 C17 SING Y N 27 X88 C17 C18 DOUB Y N 28 X88 C17 H17 SING N N 29 X88 C18 N19 SING Y N 30 X88 N19 C20 DOUB Y N 31 X88 C20 H20 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X88 SMILES ACDLabs 12.01 "[O-][N+](=O)c2ccc(NCc1nccnc1)c(C(=O)N)c2" X88 SMILES_CANONICAL CACTVS 3.370 "NC(=O)c1cc(ccc1NCc2cnccn2)[N+]([O-])=O" X88 SMILES CACTVS 3.370 "NC(=O)c1cc(ccc1NCc2cnccn2)[N+]([O-])=O" X88 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(c(cc1[N+](=O)[O-])C(=O)N)NCc2cnccn2" X88 SMILES "OpenEye OEToolkits" 1.7.0 "c1cc(c(cc1[N+](=O)[O-])C(=O)N)NCc2cnccn2" X88 InChI InChI 1.03 "InChI=1S/C12H11N5O3/c13-12(18)10-5-9(17(19)20)1-2-11(10)16-7-8-6-14-3-4-15-8/h1-6,16H,7H2,(H2,13,18)" X88 InChIKey InChI 1.03 PNGOOMNEARANOE-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X88 "SYSTEMATIC NAME" ACDLabs 12.01 "5-nitro-2-[(pyrazin-2-ylmethyl)amino]benzamide" X88 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "5-nitro-2-(pyrazin-2-ylmethylamino)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X88 "Create component" 2011-03-23 RCSB X88 "Modify descriptor" 2011-06-04 RCSB #