data_XS9 # _chem_comp.id XS9 _chem_comp.name "(1aR,1bS,4aS,7aS,7bS,8R,9R,9aS)-9a-(decanoyloxy)-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1a,1b,4,4a,5,7a,7b,8,9,9a-decahydro-1H-cyclopropa[3,4]benzo[1,2-e]azulen-9-yl decanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H64 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-06 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 672.931 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XS9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FCA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XS9 C09 C1 C 0 1 N N N 162.071 107.864 154.220 -2.704 2.862 -0.788 C09 XS9 1 XS9 C10 C2 C 0 1 N N N 161.187 109.125 154.429 -1.557 2.043 -0.257 C10 XS9 2 XS9 O11 O1 O 0 1 N N N 160.285 109.416 153.666 -1.708 1.356 0.726 O11 XS9 3 XS9 O12 O2 O 0 1 N N N 161.426 109.969 155.517 -0.366 2.075 -0.875 O12 XS9 4 XS9 C13 C3 C 0 1 N N R 161.798 109.497 156.834 0.665 1.170 -0.377 C13 XS9 5 XS9 C14 C4 C 0 1 N N R 161.558 110.745 157.819 1.628 1.940 0.506 C14 XS9 6 XS9 C15 C5 C 0 1 N N S 162.604 111.962 157.674 2.925 1.204 0.832 C15 XS9 7 XS9 C16 C6 C 0 1 N N S 163.896 111.338 157.148 3.708 0.718 -0.389 C16 XS9 8 XS9 C17 C7 C 0 1 N N N 165.048 112.206 157.532 4.573 -0.480 -0.054 C17 XS9 9 XS9 C18 C8 C 0 1 N N N 165.172 113.435 156.998 5.376 -0.529 0.966 C18 XS9 10 XS9 C19 C9 C 0 1 N N N 164.559 113.734 155.689 5.512 0.465 2.060 C19 XS9 11 XS9 C20 C10 C 0 1 N N S 163.117 114.177 155.903 5.241 1.912 1.740 C20 XS9 12 XS9 C21 C11 C 0 1 N N S 162.133 113.247 156.749 3.775 2.254 1.565 C21 XS9 13 XS9 C22 C12 C 0 1 N N N 161.161 112.808 155.685 3.836 3.445 0.631 C22 XS9 14 XS9 C23 C13 C 0 1 N N N 161.344 113.365 154.473 5.001 3.500 0.002 C23 XS9 15 XS9 C24 C14 C 0 1 N N N 162.503 114.274 154.488 5.855 2.405 0.454 C24 XS9 16 XS9 O25 O3 O 0 1 N N N 162.918 114.966 153.601 6.852 1.982 -0.087 O25 XS9 17 XS9 C26 C15 C 0 1 N N N 160.454 113.340 153.315 5.394 4.538 -1.018 C26 XS9 18 XS9 O27 O4 O 0 1 N N N 163.110 115.434 156.511 5.778 2.727 2.820 O27 XS9 19 XS9 C28 C16 C 0 1 N N N 166.202 114.384 157.497 6.216 -1.792 1.074 C28 XS9 20 XS9 O29 O5 O 0 1 N N N 165.727 115.672 157.232 5.909 -2.662 -0.018 O29 XS9 21 XS9 C30 C17 C 0 1 N N R 164.159 109.867 157.501 2.830 0.250 -1.554 C30 XS9 22 XS9 C31 C18 C 0 1 N N S 163.204 108.800 156.900 1.317 0.448 -1.533 C31 XS9 23 XS9 C32 C19 C 0 1 N N N 164.654 109.003 156.360 2.178 1.202 -2.542 C32 XS9 24 XS9 C33 C20 C 0 1 N N N 165.058 109.634 155.062 2.383 2.705 -2.397 C33 XS9 25 XS9 C34 C21 C 0 1 N N N 165.691 107.937 156.697 2.086 0.724 -4.005 C34 XS9 26 XS9 O35 O6 O 0 1 N N N 163.097 107.461 157.436 0.519 -0.657 -2.074 O35 XS9 27 XS9 C36 C22 C 0 1 N N N 162.684 107.227 158.752 0.309 -1.709 -1.267 C36 XS9 28 XS9 O37 O7 O 0 1 N N N 161.505 107.324 158.998 0.835 -1.751 -0.180 O37 XS9 29 XS9 C38 C23 C 0 1 N N N 163.738 106.850 159.846 -0.583 -2.838 -1.717 C38 XS9 30 XS9 O47 O8 O 0 1 N N N 162.822 112.423 158.970 2.649 0.109 1.703 O47 XS9 31 XS9 C48 C24 C 0 1 N N N 161.567 110.219 159.270 0.887 2.218 1.833 C48 XS9 32 XS9 H1 H1 H 0 1 N N N 163.039 108.086 153.747 -2.432 3.917 -0.780 H1 XS9 33 XS9 H2 H2 H 0 1 N N N 162.237 107.292 155.145 -2.930 2.553 -1.809 H2 XS9 34 XS9 H131 H4 H 0 0 N N N 161.064 108.734 157.133 0.149 0.419 0.255 H131 XS9 35 XS9 H141 H5 H 0 0 N N N 160.556 111.145 157.605 1.843 2.910 0.062 H141 XS9 36 XS9 H161 H6 H 0 0 N N N 163.828 111.378 156.051 4.351 1.497 -0.745 H161 XS9 37 XS9 H171 H7 H 0 0 N N N 165.782 111.848 158.238 4.513 -1.338 -0.705 H171 XS9 38 XS9 H191 H10 H 0 0 N N N 164.578 112.832 155.059 4.855 0.156 2.892 H191 XS9 39 XS9 H192 H11 H 0 0 N N N 165.122 114.539 155.194 6.537 0.385 2.467 H192 XS9 40 XS9 H211 H12 H 0 0 N N N 161.588 113.917 157.430 3.322 2.542 2.528 H211 XS9 41 XS9 H221 H13 H 0 0 N N N 160.373 112.096 155.881 3.040 4.164 0.507 H221 XS9 42 XS9 H262 H16 H 0 0 N N N 159.652 112.606 153.484 6.411 4.343 -1.361 H262 XS9 43 XS9 H261 H17 H 0 0 N N N 160.013 114.337 153.170 4.710 4.493 -1.865 H261 XS9 44 XS9 H263 H18 H 0 0 N N N 161.026 113.058 152.419 5.348 5.528 -0.564 H263 XS9 45 XS9 H271 H19 H 0 0 N N N 163.034 116.108 155.846 6.729 2.618 2.959 H271 XS9 46 XS9 H281 H20 H 0 0 N N N 166.348 114.250 158.579 7.273 -1.529 1.043 H281 XS9 47 XS9 H282 H21 H 0 0 N N N 167.155 114.217 156.974 5.994 -2.297 2.014 H282 XS9 48 XS9 H291 H22 H 0 0 N N N 166.359 116.312 157.537 6.409 -3.490 -0.014 H291 XS9 49 XS9 H301 H23 H 0 0 N N N 164.561 109.659 158.503 3.162 -0.706 -1.985 H301 XS9 50 XS9 H332 H24 H 0 0 N N N 164.329 110.411 154.788 1.416 3.208 -2.422 H332 XS9 51 XS9 H331 H25 H 0 0 N N N 166.054 110.088 155.170 2.877 2.914 -1.448 H331 XS9 52 XS9 H333 H26 H 0 0 N N N 165.088 108.866 154.275 3.003 3.068 -3.217 H333 XS9 53 XS9 H342 H27 H 0 0 N N N 165.424 107.452 157.648 1.058 0.819 -4.354 H342 XS9 54 XS9 H341 H28 H 0 0 N N N 165.716 107.184 155.896 2.740 1.333 -4.628 H341 XS9 55 XS9 H343 H29 H 0 0 N N N 166.682 108.406 156.790 2.395 -0.320 -4.066 H343 XS9 56 XS9 H8 H30 H 0 1 N N N 164.823 106.873 159.665 -1.584 -2.453 -1.914 H8 XS9 57 XS9 H9 H31 H 0 1 N N N 163.544 106.950 160.924 -0.178 -3.280 -2.626 H9 XS9 58 XS9 H471 H93 H 0 0 N N N 163.095 111.700 159.522 2.250 0.367 2.545 H471 XS9 59 XS9 H482 H94 H 0 0 N N N 161.404 111.056 159.965 0.657 1.273 2.326 H482 XS9 60 XS9 H481 H95 H 0 0 N N N 160.765 109.477 159.396 1.520 2.822 2.484 H481 XS9 61 XS9 H483 H96 H 0 0 N N N 162.538 109.749 159.483 -0.039 2.755 1.627 H483 XS9 62 XS9 C08 C08 C 0 1 N N N ? ? ? -3.936 2.646 0.094 C08 XS9 63 XS9 C07 C07 C 0 1 N N N ? ? ? -5.102 3.478 -0.446 C07 XS9 64 XS9 C06 C06 C 0 1 N N N ? ? ? -6.333 3.262 0.436 C06 XS9 65 XS9 C05 C05 C 0 1 N N N ? ? ? -7.499 4.094 -0.104 C05 XS9 66 XS9 C04 C04 C 0 1 N N N ? ? ? -8.730 3.878 0.778 C04 XS9 67 XS9 C03 C03 C 0 1 N N N ? ? ? -9.896 4.709 0.238 C03 XS9 68 XS9 C02 C02 C 0 1 N N N ? ? ? -11.127 4.493 1.120 C02 XS9 69 XS9 C01 C32 C 0 1 N N N ? ? ? -12.293 5.325 0.580 C01 XS9 70 XS9 H3 H3 H 0 1 N N N ? ? ? -4.208 1.590 0.085 H3 XS9 71 XS9 H4 H32 H 0 1 N N N ? ? ? -3.711 2.955 1.114 H4 XS9 72 XS9 H5 H33 H 0 1 N N N ? ? ? -4.829 4.533 -0.438 H5 XS9 73 XS9 H6 H34 H 0 1 N N N ? ? ? -5.327 3.168 -1.467 H6 XS9 74 XS9 H7 H35 H 0 1 N N N ? ? ? -6.606 2.206 0.427 H7 XS9 75 XS9 H11 H37 H 0 1 N N N ? ? ? -6.108 3.571 1.456 H11 XS9 76 XS9 H12 H38 H 0 1 N N N ? ? ? -7.226 5.149 -0.095 H12 XS9 77 XS9 H13 H39 H 0 1 N N N ? ? ? -7.724 3.784 -1.125 H13 XS9 78 XS9 H14 H14 H 0 1 N N N ? ? ? -9.003 2.822 0.769 H14 XS9 79 XS9 H15 H15 H 0 1 N N N ? ? ? -8.505 4.187 1.798 H15 XS9 80 XS9 H16 H42 H 0 1 N N N ? ? ? -9.623 5.765 0.247 H16 XS9 81 XS9 H17 H43 H 0 1 N N N ? ? ? -10.121 4.400 -0.783 H17 XS9 82 XS9 H18 H44 H 0 1 N N N ? ? ? -11.400 3.438 1.111 H18 XS9 83 XS9 H19 H45 H 0 1 N N N ? ? ? -10.902 4.802 2.141 H19 XS9 84 XS9 H20 H46 H 0 1 N N N ? ? ? -13.170 5.171 1.208 H20 XS9 85 XS9 H21 H47 H 0 1 N N N ? ? ? -12.021 6.381 0.589 H21 XS9 86 XS9 H22 H88 H 0 1 N N N ? ? ? -12.518 5.016 -0.440 H22 XS9 87 XS9 C39 C39 C 0 1 N N N ? ? ? -0.652 -3.901 -0.619 C39 XS9 88 XS9 C40 C40 C 0 1 N N N ? ? ? -1.558 -5.047 -1.075 C40 XS9 89 XS9 C41 C41 C 0 1 N N N ? ? ? -1.627 -6.110 0.022 C41 XS9 90 XS9 C42 C42 C 0 1 N N N ? ? ? -2.533 -7.256 -0.434 C42 XS9 91 XS9 C43 C43 C 0 1 N N N ? ? ? -2.602 -8.320 0.664 C43 XS9 92 XS9 C44 C44 C 0 1 N N N ? ? ? -3.507 -9.465 0.207 C44 XS9 93 XS9 C45 C45 C 0 1 N N N ? ? ? -3.577 -10.529 1.305 C45 XS9 94 XS9 C46 C46 C 0 1 N N N ? ? ? -4.482 -11.675 0.848 C46 XS9 95 XS9 H10 H98 H 0 1 N N N ? ? ? 0.348 -4.285 -0.422 H10 XS9 96 XS9 H23 H49 H 0 1 N N N ? ? ? -1.058 -3.458 0.291 H23 XS9 97 XS9 H24 H50 H 0 1 N N N ? ? ? -2.559 -4.662 -1.273 H24 XS9 98 XS9 H25 H51 H 0 1 N N N ? ? ? -1.153 -5.490 -1.985 H25 XS9 99 XS9 H26 H52 H 0 1 N N N ? ? ? -0.627 -6.495 0.220 H26 XS9 100 XS9 H27 H53 H 0 1 N N N ? ? ? -2.032 -5.668 0.932 H27 XS9 101 XS9 H28 H54 H 0 1 N N N ? ? ? -3.533 -6.872 -0.632 H28 XS9 102 XS9 H29 H55 H 0 1 N N N ? ? ? -2.128 -7.699 -1.344 H29 XS9 103 XS9 H30 H56 H 0 1 N N N ? ? ? -1.601 -8.704 0.861 H30 XS9 104 XS9 H31 H57 H 0 1 N N N ? ? ? -3.007 -7.877 1.573 H31 XS9 105 XS9 H32 H58 H 0 1 N N N ? ? ? -4.508 -9.081 0.010 H32 XS9 106 XS9 H33 H59 H 0 1 N N N ? ? ? -3.102 -9.908 -0.703 H33 XS9 107 XS9 H34 H60 H 0 1 N N N ? ? ? -2.576 -10.913 1.502 H34 XS9 108 XS9 H35 H61 H 0 1 N N N ? ? ? -3.982 -10.086 2.215 H35 XS9 109 XS9 H36 H62 H 0 1 N N N ? ? ? -5.483 -11.290 0.651 H36 XS9 110 XS9 H37 H63 H 0 1 N N N ? ? ? -4.077 -12.118 -0.062 H37 XS9 111 XS9 H38 H64 H 0 1 N N N ? ? ? -4.532 -12.432 1.630 H38 XS9 112 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XS9 C26 C23 SING N N 1 XS9 O25 C24 DOUB N N 2 XS9 O11 C10 DOUB N N 3 XS9 C09 C10 SING N N 4 XS9 C10 O12 SING N N 5 XS9 C23 C24 SING N N 6 XS9 C23 C22 DOUB N N 7 XS9 C24 C20 SING N N 8 XS9 C33 C32 SING N N 9 XS9 O12 C13 SING N N 10 XS9 C22 C21 SING N N 11 XS9 C19 C20 SING N N 12 XS9 C19 C18 SING N N 13 XS9 C20 O27 SING N N 14 XS9 C20 C21 SING N N 15 XS9 C32 C34 SING N N 16 XS9 C32 C31 SING N N 17 XS9 C32 C30 SING N N 18 XS9 C21 C15 SING N N 19 XS9 C13 C31 SING N N 20 XS9 C13 C14 SING N N 21 XS9 C31 O35 SING N N 22 XS9 C31 C30 SING N N 23 XS9 C18 C28 SING N N 24 XS9 C18 C17 DOUB N N 25 XS9 C16 C30 SING N N 26 XS9 C16 C17 SING N N 27 XS9 C16 C15 SING N N 28 XS9 O29 C28 SING N N 29 XS9 O35 C36 SING N N 30 XS9 C15 C14 SING N N 31 XS9 C15 O47 SING N N 32 XS9 C14 C48 SING N N 33 XS9 C36 O37 DOUB N N 34 XS9 C36 C38 SING N N 35 XS9 C09 H1 SING N N 36 XS9 C09 H2 SING N N 37 XS9 C13 H131 SING N N 38 XS9 C14 H141 SING N N 39 XS9 C16 H161 SING N N 40 XS9 C17 H171 SING N N 41 XS9 C19 H191 SING N N 42 XS9 C19 H192 SING N N 43 XS9 C21 H211 SING N N 44 XS9 C22 H221 SING N N 45 XS9 C26 H262 SING N N 46 XS9 C26 H261 SING N N 47 XS9 C26 H263 SING N N 48 XS9 O27 H271 SING N N 49 XS9 C28 H281 SING N N 50 XS9 C28 H282 SING N N 51 XS9 O29 H291 SING N N 52 XS9 C30 H301 SING N N 53 XS9 C33 H332 SING N N 54 XS9 C33 H331 SING N N 55 XS9 C33 H333 SING N N 56 XS9 C34 H342 SING N N 57 XS9 C34 H341 SING N N 58 XS9 C34 H343 SING N N 59 XS9 C38 H8 SING N N 60 XS9 C38 H9 SING N N 61 XS9 O47 H471 SING N N 62 XS9 C48 H482 SING N N 63 XS9 C48 H481 SING N N 64 XS9 C48 H483 SING N N 65 XS9 C09 C08 SING N N 66 XS9 C08 C07 SING N N 67 XS9 C07 C06 SING N N 68 XS9 C06 C05 SING N N 69 XS9 C05 C04 SING N N 70 XS9 C04 C03 SING N N 71 XS9 C03 C02 SING N N 72 XS9 C02 C01 SING N N 73 XS9 C08 H3 SING N N 74 XS9 C08 H4 SING N N 75 XS9 C07 H5 SING N N 76 XS9 C07 H6 SING N N 77 XS9 C06 H7 SING N N 78 XS9 C06 H11 SING N N 79 XS9 C05 H12 SING N N 80 XS9 C05 H13 SING N N 81 XS9 C04 H14 SING N N 82 XS9 C04 H15 SING N N 83 XS9 C03 H16 SING N N 84 XS9 C03 H17 SING N N 85 XS9 C02 H18 SING N N 86 XS9 C02 H19 SING N N 87 XS9 C01 H20 SING N N 88 XS9 C01 H21 SING N N 89 XS9 C01 H22 SING N N 90 XS9 C38 C39 SING N N 91 XS9 C39 C40 SING N N 92 XS9 C40 C41 SING N N 93 XS9 C41 C42 SING N N 94 XS9 C42 C43 SING N N 95 XS9 C43 C44 SING N N 96 XS9 C44 C45 SING N N 97 XS9 C45 C46 SING N N 98 XS9 C39 H10 SING N N 99 XS9 C39 H23 SING N N 100 XS9 C40 H24 SING N N 101 XS9 C40 H25 SING N N 102 XS9 C41 H26 SING N N 103 XS9 C41 H27 SING N N 104 XS9 C42 H28 SING N N 105 XS9 C42 H29 SING N N 106 XS9 C43 H30 SING N N 107 XS9 C43 H31 SING N N 108 XS9 C44 H32 SING N N 109 XS9 C44 H33 SING N N 110 XS9 C45 H34 SING N N 111 XS9 C45 H35 SING N N 112 XS9 C46 H36 SING N N 113 XS9 C46 H37 SING N N 114 XS9 C46 H38 SING N N 115 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XS9 SMILES ACDLabs 12.01 "CCCCCCCCCC(=O)OC12C(C3C=C(CO)CC4(O)C(=O)C(C)=CC4C3(O)C(C)C1OC(=O)CCCCCCCCC)C2(C)C" XS9 InChI InChI 1.06 "InChI=1S/C40H64O8/c1-7-9-11-13-15-17-19-21-32(42)47-36-28(4)39(46)30(24-29(26-41)25-38(45)31(39)23-27(3)35(38)44)34-37(5,6)40(34,36)48-33(43)22-20-18-16-14-12-10-8-2/h23-24,28,30-31,34,36,41,45-46H,7-22,25-26H2,1-6H3/t28-,30+,31-,34-,36-,38+,39-,40-/m1/s1" XS9 InChIKey InChI 1.06 DGOSGFYDFDYMCW-OEFRVDPMSA-N XS9 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCC(=O)O[C@@H]1[C@@H](C)[C@@]2(O)[C@@H](C=C(CO)C[C@]3(O)[C@H]2C=C(C)C3=O)[C@@H]4C(C)(C)[C@]14OC(=O)CCCCCCCCC" XS9 SMILES CACTVS 3.385 "CCCCCCCCCC(=O)O[CH]1[CH](C)[C]2(O)[CH](C=C(CO)C[C]3(O)[CH]2C=C(C)C3=O)[CH]4C(C)(C)[C]14OC(=O)CCCCCCCCC" XS9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)O[C@@H]1[C@H]([C@]2([C@@H](C=C(C[C@@]3([C@H]2C=C(C3=O)C)O)CO)[C@H]4C1(C4(C)C)OC(=O)CCCCCCCCC)O)C" XS9 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)OC1C(C2(C(C=C(CC3(C2C=C(C3=O)C)O)CO)C4C1(C4(C)C)OC(=O)CCCCCCCCC)O)C" # _pdbx_chem_comp_identifier.comp_id XS9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(1aR,1bS,4aS,7aS,7bS,8R,9R,9aS)-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulene-9,9a-diyl didecanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XS9 "Create component" 2022-12-06 RCSB XS9 "Modify descriptor" 2023-06-26 RCSB XS9 "Initial release" 2023-07-05 RCSB #