data_XV5 # _chem_comp.id XV5 _chem_comp.name "(2Z)-2-[(2,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-3(2H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-13 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 270.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XV5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FG8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XV5 C7 C1 C 0 1 N N N -7.117 18.343 5.466 2.179 1.508 0.126 C7 XV5 1 XV5 C8 C2 C 0 1 N N N -8.484 18.882 5.467 0.904 0.877 0.161 C8 XV5 2 XV5 C9 C3 C 0 1 N N N -8.928 19.914 6.186 -0.295 1.511 0.268 C9 XV5 3 XV5 O1 O1 O 0 1 N N N -9.231 18.266 4.474 1.087 -0.461 0.068 O1 XV5 4 XV5 C1 C4 C 0 1 Y N N -6.340 16.128 4.315 4.541 0.356 -0.089 C1 XV5 5 XV5 O5 O2 O 0 1 N N N -10.932 20.367 10.603 -2.693 -2.712 0.245 O5 XV5 6 XV5 C5 C5 C 0 1 Y N N -8.479 17.181 4.032 2.396 -0.777 -0.027 C5 XV5 7 XV5 C6 C6 C 0 1 Y N N -7.188 17.207 4.554 3.150 0.406 -0.004 C6 XV5 8 XV5 C4 C7 C 0 1 Y N N -8.941 16.139 3.240 3.055 -1.996 -0.140 C4 XV5 9 XV5 O4 O3 O 0 1 N N N -13.306 21.115 9.457 -5.057 -1.393 -0.242 O4 XV5 10 XV5 C3 C8 C 0 1 Y N N -8.085 15.072 3.006 4.431 -2.034 -0.222 C3 XV5 11 XV5 O3 O4 O 0 1 N N N -11.608 19.930 5.204 -2.773 2.772 -0.222 O3 XV5 12 XV5 C2 C9 C 0 1 Y N N -6.797 15.065 3.543 5.174 -0.864 -0.192 C2 XV5 13 XV5 C10 C10 C 0 1 Y N N -10.089 20.055 7.065 -1.539 0.751 0.135 C10 XV5 14 XV5 C11 C11 C 0 1 Y N N -9.942 20.149 8.455 -1.528 -0.647 0.255 C11 XV5 15 XV5 C12 C12 C 0 1 Y N N -11.024 20.474 9.256 -2.703 -1.356 0.129 C12 XV5 16 XV5 C13 C13 C 0 1 Y N N -12.261 20.768 8.674 -3.904 -0.687 -0.119 C13 XV5 17 XV5 C14 C14 C 0 1 Y N N -12.426 20.660 7.303 -3.924 0.694 -0.240 C14 XV5 18 XV5 C15 C15 C 0 1 Y N N -11.364 20.257 6.505 -2.752 1.419 -0.109 C15 XV5 19 XV5 O2 O5 O 0 1 N N N -6.144 18.811 6.050 2.417 2.702 0.186 O2 XV5 20 XV5 H2 H2 H 0 1 N N N -8.322 20.804 6.105 -0.329 2.574 0.452 H2 XV5 21 XV5 H4 H4 H 0 1 N N N -5.340 16.117 4.724 5.119 1.268 -0.071 H4 XV5 22 XV5 H5 H5 H 0 1 N N N -11.756 20.626 10.999 -2.828 -3.030 1.148 H5 XV5 23 XV5 H6 H6 H 0 1 N N N -9.935 16.158 2.819 2.488 -2.915 -0.164 H6 XV5 24 XV5 H7 H7 H 0 1 N N N -13.026 21.144 10.364 -5.530 -1.524 0.591 H7 XV5 25 XV5 H8 H8 H 0 1 N N N -8.418 14.240 2.403 4.935 -2.986 -0.309 H8 XV5 26 XV5 H9 H9 H 0 1 N N N -12.512 20.130 4.991 -2.643 3.093 -1.125 H9 XV5 27 XV5 H10 H10 H 0 1 N N N -6.147 14.223 3.357 6.251 -0.908 -0.257 H10 XV5 28 XV5 H11 H11 H 0 1 N N N -8.977 19.967 8.905 -0.601 -1.166 0.446 H11 XV5 29 XV5 H12 H12 H 0 1 N N N -13.381 20.889 6.855 -4.856 1.205 -0.431 H12 XV5 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XV5 C3 C4 DOUB Y N 1 XV5 C3 C2 SING Y N 2 XV5 C4 C5 SING Y N 3 XV5 C2 C1 DOUB Y N 4 XV5 C5 O1 SING N N 5 XV5 C5 C6 DOUB Y N 6 XV5 C1 C6 SING Y N 7 XV5 O1 C8 SING N N 8 XV5 C6 C7 SING N N 9 XV5 O3 C15 SING N N 10 XV5 C7 C8 SING N N 11 XV5 C7 O2 DOUB N N 12 XV5 C8 C9 DOUB N Z 13 XV5 C9 C10 SING N N 14 XV5 C15 C10 DOUB Y N 15 XV5 C15 C14 SING Y N 16 XV5 C10 C11 SING Y N 17 XV5 C14 C13 DOUB Y N 18 XV5 C11 C12 DOUB Y N 19 XV5 C13 C12 SING Y N 20 XV5 C13 O4 SING N N 21 XV5 C12 O5 SING N N 22 XV5 C9 H2 SING N N 23 XV5 C1 H4 SING N N 24 XV5 O5 H5 SING N N 25 XV5 C4 H6 SING N N 26 XV5 O4 H7 SING N N 27 XV5 C3 H8 SING N N 28 XV5 O3 H9 SING N N 29 XV5 C2 H10 SING N N 30 XV5 C11 H11 SING N N 31 XV5 C14 H12 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XV5 SMILES ACDLabs 12.01 "Oc1cc(/C=C2\Oc3ccccc3C2=O)c(O)cc1O" XV5 InChI InChI 1.06 "InChI=1S/C15H10O5/c16-10-7-12(18)11(17)5-8(10)6-14-15(19)9-3-1-2-4-13(9)20-14/h1-7,16-18H" XV5 InChIKey InChI 1.06 VVYKSKJYFAOSBP-UHFFFAOYSA-N XV5 SMILES_CANONICAL CACTVS 3.385 "Oc1cc(O)c(cc1O)/C=C/2Oc3ccccc3C/2=O" XV5 SMILES CACTVS 3.385 "Oc1cc(O)c(cc1O)C=C2Oc3ccccc3C2=O" XV5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=O)C(=Cc3cc(c(cc3O)O)O)O2" XV5 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=O)C(=Cc3cc(c(cc3O)O)O)O2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XV5 "SYSTEMATIC NAME" ACDLabs 12.01 "(2Z)-2-[(2,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-3(2H)-one" XV5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[2,4,5-tris(oxidanyl)phenyl]methylidene]-1-benzofuran-3-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XV5 "Create component" 2022-12-13 RCSB XV5 "Other modification" 2022-12-14 RCSB XV5 "Initial release" 2023-06-14 RCSB #