data_XVO # _chem_comp.id XVO _chem_comp.name "6-(2-{5-[2-(dimethylamino)ethyl]-2,3-difluorophenyl}ethyl)pyridin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H21 F2 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-13 _chem_comp.pdbx_modified_date 2023-10-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 305.366 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XVO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FGF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XVO C02 C1 C 0 1 Y N N 116.556 243.109 359.808 -5.263 -0.601 -0.756 C02 XVO 1 XVO C03 C2 C 0 1 Y N N 115.793 243.630 360.845 -5.804 -1.652 -0.022 C03 XVO 2 XVO C04 C3 C 0 1 Y N N 116.124 244.882 361.366 -5.086 -2.170 1.041 C04 XVO 3 XVO C05 C4 C 0 1 Y N N 117.200 245.584 360.826 -3.847 -1.617 1.336 C05 XVO 4 XVO C06 C5 C 0 1 Y N N 117.918 245.035 359.770 -3.371 -0.575 0.566 C06 XVO 5 XVO C07 C6 C 0 1 N N N 119.140 245.714 359.189 -2.027 0.029 0.881 C07 XVO 6 XVO C08 C7 C 0 1 N N N 120.166 244.918 360.001 -1.145 -0.011 -0.369 C08 XVO 7 XVO C11 C8 C 0 1 Y N N 122.492 244.294 360.519 0.355 1.968 -0.043 C11 XVO 8 XVO C12 C9 C 0 1 Y N N 123.860 244.312 360.330 1.593 2.522 0.247 C12 XVO 9 XVO C13 C10 C 0 1 Y N N 124.395 245.063 359.294 2.671 1.699 0.520 C13 XVO 10 XVO C14 C11 C 0 1 Y N N 123.557 245.796 358.462 2.514 0.326 0.502 C14 XVO 11 XVO C15 C12 C 0 1 Y N N 122.173 245.777 358.649 1.281 -0.227 0.213 C15 XVO 12 XVO C16 C13 C 0 1 Y N N 121.645 245.017 359.690 0.200 0.593 -0.054 C16 XVO 13 XVO C17 C14 C 0 1 N N N 124.177 246.587 357.337 3.690 -0.570 0.793 C17 XVO 14 XVO C18 C15 C 0 1 N N N 125.039 245.607 356.550 4.424 -0.888 -0.511 C18 XVO 15 XVO C20 C16 C 0 1 N N N 126.103 246.861 354.822 5.125 -3.076 0.252 C20 XVO 16 XVO C21 C17 C 0 1 N N N 125.089 244.726 354.317 6.434 -1.897 -1.408 C21 XVO 17 XVO F11 F1 F 0 1 N N N 121.982 243.561 361.525 -0.699 2.770 -0.310 F11 XVO 18 XVO F12 F2 F 0 1 N N N 124.660 243.608 361.153 1.746 3.865 0.264 F12 XVO 19 XVO N01 N1 N 0 1 Y N N 117.595 243.814 359.318 -4.078 -0.101 -0.443 N01 XVO 20 XVO N02 N2 N 0 1 N N N 116.274 241.892 359.275 -5.971 -0.076 -1.830 N02 XVO 21 XVO N19 N3 N 0 1 N N N 124.988 245.952 355.126 5.571 -1.761 -0.228 N19 XVO 22 XVO H1 H1 H 0 1 N N N 114.956 243.075 361.242 -6.771 -2.058 -0.279 H1 XVO 23 XVO H2 H2 H 0 1 N N N 115.552 245.303 362.180 -5.481 -2.985 1.629 H2 XVO 24 XVO H3 H3 H 0 1 N N N 117.474 246.549 361.226 -3.262 -1.998 2.160 H3 XVO 25 XVO H4 H4 H 0 1 N N N 119.240 245.555 358.105 -2.159 1.063 1.199 H4 XVO 26 XVO H5 H5 H 0 1 N N N 119.171 246.792 359.406 -1.551 -0.540 1.679 H5 XVO 27 XVO H6 H6 H 0 1 N N N 120.044 245.227 361.050 -1.013 -1.045 -0.688 H6 XVO 28 XVO H7 H7 H 0 1 N N N 119.894 243.857 359.897 -1.620 0.558 -1.168 H7 XVO 29 XVO H8 H8 H 0 1 N N N 125.463 245.078 359.134 3.636 2.129 0.746 H8 XVO 30 XVO H9 H9 H 0 1 N N N 121.523 246.342 357.997 1.160 -1.300 0.200 H9 XVO 31 XVO H10 H10 H 0 1 N N N 124.797 247.401 357.740 4.371 -0.065 1.479 H10 XVO 32 XVO H11 H11 H 0 1 N N N 123.393 247.009 356.691 3.338 -1.497 1.247 H11 XVO 33 XVO H12 H12 H 0 1 N N N 124.659 244.585 356.694 3.744 -1.393 -1.197 H12 XVO 34 XVO H13 H13 H 0 1 N N N 126.079 245.665 356.905 4.776 0.038 -0.965 H13 XVO 35 XVO H14 H14 H 0 1 N N N 126.013 247.771 355.434 5.993 -3.678 0.521 H14 XVO 36 XVO H15 H15 H 0 1 N N N 127.056 246.360 355.048 4.488 -2.947 1.127 H15 XVO 37 XVO H16 H16 H 0 1 N N N 126.075 247.132 353.756 4.564 -3.579 -0.536 H16 XVO 38 XVO H17 H17 H 0 1 N N N 124.249 244.058 354.556 5.862 -2.327 -2.230 H17 XVO 39 XVO H18 H18 H 0 1 N N N 125.056 244.988 353.249 6.806 -0.915 -1.701 H18 XVO 40 XVO H19 H19 H 0 1 N N N 126.038 244.216 354.541 7.275 -2.548 -1.171 H19 XVO 41 XVO H20 H20 H 0 1 N N N 116.927 241.687 358.546 -6.838 -0.442 -2.066 H20 XVO 42 XVO H21 H21 H 0 1 N N N 116.340 241.193 359.987 -5.598 0.657 -2.345 H21 XVO 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XVO C21 N19 SING N N 1 XVO C20 N19 SING N N 2 XVO N19 C18 SING N N 3 XVO C18 C17 SING N N 4 XVO C17 C14 SING N N 5 XVO C14 C15 DOUB Y N 6 XVO C14 C13 SING Y N 7 XVO C15 C16 SING Y N 8 XVO C07 C06 SING N N 9 XVO C07 C08 SING N N 10 XVO N02 C02 SING N N 11 XVO C13 C12 DOUB Y N 12 XVO N01 C06 DOUB Y N 13 XVO N01 C02 SING Y N 14 XVO C16 C08 SING N N 15 XVO C16 C11 DOUB Y N 16 XVO C06 C05 SING Y N 17 XVO C02 C03 DOUB Y N 18 XVO C12 C11 SING Y N 19 XVO C12 F12 SING N N 20 XVO C11 F11 SING N N 21 XVO C05 C04 DOUB Y N 22 XVO C03 C04 SING Y N 23 XVO C03 H1 SING N N 24 XVO C04 H2 SING N N 25 XVO C05 H3 SING N N 26 XVO C07 H4 SING N N 27 XVO C07 H5 SING N N 28 XVO C08 H6 SING N N 29 XVO C08 H7 SING N N 30 XVO C13 H8 SING N N 31 XVO C15 H9 SING N N 32 XVO C17 H10 SING N N 33 XVO C17 H11 SING N N 34 XVO C18 H12 SING N N 35 XVO C18 H13 SING N N 36 XVO C20 H14 SING N N 37 XVO C20 H15 SING N N 38 XVO C20 H16 SING N N 39 XVO C21 H17 SING N N 40 XVO C21 H18 SING N N 41 XVO C21 H19 SING N N 42 XVO N02 H20 SING N N 43 XVO N02 H21 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XVO SMILES ACDLabs 12.01 "Nc1cccc(CCc2cc(CCN(C)C)cc(F)c2F)n1" XVO InChI InChI 1.06 "InChI=1S/C17H21F2N3/c1-22(2)9-8-12-10-13(17(19)15(18)11-12)6-7-14-4-3-5-16(20)21-14/h3-5,10-11H,6-9H2,1-2H3,(H2,20,21)" XVO InChIKey InChI 1.06 BZYINMFJDLIFGN-UHFFFAOYSA-N XVO SMILES_CANONICAL CACTVS 3.385 "CN(C)CCc1cc(F)c(F)c(CCc2cccc(N)n2)c1" XVO SMILES CACTVS 3.385 "CN(C)CCc1cc(F)c(F)c(CCc2cccc(N)n2)c1" XVO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCc1cc(c(c(c1)F)F)CCc2cccc(n2)N" XVO SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)CCc1cc(c(c(c1)F)F)CCc2cccc(n2)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XVO "SYSTEMATIC NAME" ACDLabs 12.01 "6-(2-{5-[2-(dimethylamino)ethyl]-2,3-difluorophenyl}ethyl)pyridin-2-amine" XVO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[2-[5-[2-(dimethylamino)ethyl]-2,3-bis(fluoranyl)phenyl]ethyl]pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XVO "Create component" 2022-12-13 RCSB XVO "Initial release" 2023-10-11 RCSB #