data_Y6V # _chem_comp.id Y6V _chem_comp.name "~{N}-cyclopropyl-3-oxidanylidene-~{N}-(thiophen-2-ylmethyl)-4~{H}-1,4-benzoxazine-7-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-08 _chem_comp.pdbx_modified_date 2021-03-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.386 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y6V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LMT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y6V O1 O1 O 0 1 N N N 0.065 -3.205 18.740 -0.721 2.582 0.887 O1 Y6V 1 Y6V C1 C1 C 0 1 N N N -1.004 -2.967 19.302 -0.717 1.552 0.242 C1 Y6V 2 Y6V N1 N1 N 0 1 N N N -1.520 -1.705 19.225 -1.846 1.130 -0.361 N1 Y6V 3 Y6V C2 C2 C 0 1 N N N -0.649 -0.600 18.778 -1.844 -0.116 -1.133 C2 Y6V 4 Y6V C3 C3 C 0 1 Y N N 0.104 0.047 19.905 -2.863 -1.065 -0.558 C3 Y6V 5 Y6V C4 C4 C 0 1 Y N N 0.361 1.417 20.052 -4.142 -1.138 -0.931 C4 Y6V 6 Y6V C5 C5 C 0 1 Y N N 1.151 1.652 21.208 -4.891 -2.089 -0.261 C5 Y6V 7 Y6V C6 C6 C 0 1 Y N N 1.589 0.518 21.807 -4.222 -2.788 0.657 C6 Y6V 8 Y6V S1 S1 S 0 1 Y N N 0.842 -0.871 21.172 -2.548 -2.250 0.702 S1 Y6V 9 Y6V C7 C7 C 0 1 N N N -2.906 -1.391 19.581 -3.076 1.917 -0.246 C7 Y6V 10 Y6V C8 C8 C 0 1 N N N -4.018 -2.088 18.873 -3.002 3.401 -0.610 C8 Y6V 11 Y6V C9 C9 C 0 1 N N N -3.792 -0.639 18.645 -3.136 2.978 0.855 C9 Y6V 12 Y6V C10 C10 C 0 1 Y N N -1.632 -4.094 20.065 0.525 0.766 0.114 C10 Y6V 13 Y6V C11 C11 C 0 1 Y N N -1.680 -5.374 19.499 0.470 -0.630 0.090 C11 Y6V 14 Y6V C12 C12 C 0 1 Y N N -2.187 -6.442 20.213 1.631 -1.365 -0.028 C12 Y6V 15 Y6V C13 C13 C 0 1 Y N N -2.674 -6.242 21.508 2.855 -0.719 -0.124 C13 Y6V 16 Y6V N2 N2 N 0 1 N N N -3.217 -7.289 22.274 4.038 -1.452 -0.247 N2 Y6V 17 Y6V C14 C14 C 0 1 N N N -3.822 -7.081 23.462 5.219 -0.836 -0.024 C14 Y6V 18 Y6V O2 O2 O 0 1 N N N -4.189 -8.005 24.174 6.258 -1.447 -0.154 O2 Y6V 19 Y6V C15 C15 C 0 1 N N N -4.027 -5.654 23.887 5.240 0.615 0.387 C15 Y6V 20 Y6V O3 O3 O 0 1 N N N -3.138 -4.702 23.311 4.125 1.294 -0.195 O3 Y6V 21 Y6V C16 C16 C 0 1 Y N N -2.684 -4.959 22.048 2.917 0.677 -0.101 C16 Y6V 22 Y6V C17 C17 C 0 1 Y N N -2.137 -3.904 21.355 1.758 1.417 0.011 C17 Y6V 23 Y6V H1 H1 H 0 1 N N N 0.077 -0.997 18.054 -2.093 0.100 -2.172 H1 Y6V 24 Y6V H2 H2 H 0 1 N N N -1.273 0.163 18.290 -0.855 -0.571 -1.083 H2 Y6V 25 Y6V H3 H3 H 0 1 N N N 0.008 2.186 19.380 -4.561 -0.503 -1.698 H3 Y6V 26 Y6V H4 H4 H 0 1 N N N 1.381 2.641 21.575 -5.939 -2.253 -0.465 H4 Y6V 27 Y6V H5 H5 H 0 1 N N N 2.327 0.499 22.596 -4.642 -3.568 1.275 H5 Y6V 28 Y6V H6 H6 H 0 1 N N N -3.086 -1.195 20.648 -3.998 1.386 -0.483 H6 Y6V 29 Y6V H7 H7 H 0 1 N N N -4.902 -2.425 19.435 -2.038 3.792 -0.935 H7 Y6V 30 Y6V H8 H8 H 0 1 N N N -3.794 -2.811 18.075 -3.875 3.847 -1.087 H8 Y6V 31 Y6V H9 H9 H 0 1 N N N -3.400 -0.289 17.679 -4.096 3.145 1.342 H9 Y6V 32 Y6V H10 H10 H 0 1 N N N -4.508 0.098 19.038 -2.259 3.091 1.493 H10 Y6V 33 Y6V H11 H11 H 0 1 N N N -1.317 -5.528 18.494 -0.482 -1.134 0.165 H11 Y6V 34 Y6V H12 H12 H 0 1 N N N -2.207 -7.428 19.773 1.587 -2.444 -0.046 H12 Y6V 35 Y6V H13 H13 H 0 1 N N N -3.152 -8.224 21.925 4.012 -2.391 -0.488 H13 Y6V 36 Y6V H14 H14 H 0 1 N N N -3.910 -5.607 24.980 5.182 0.685 1.473 H14 Y6V 37 Y6V H15 H15 H 0 1 N N N -5.053 -5.365 23.615 6.166 1.076 0.042 H15 Y6V 38 Y6V H16 H16 H 0 1 N N N -2.097 -2.925 21.809 1.804 2.496 0.025 H16 Y6V 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y6V C9 C8 SING N N 1 Y6V C9 C7 SING N N 2 Y6V O1 C1 DOUB N N 3 Y6V C2 N1 SING N N 4 Y6V C2 C3 SING N N 5 Y6V C8 C7 SING N N 6 Y6V N1 C1 SING N N 7 Y6V N1 C7 SING N N 8 Y6V C1 C10 SING N N 9 Y6V C11 C10 DOUB Y N 10 Y6V C11 C12 SING Y N 11 Y6V C3 C4 DOUB Y N 12 Y6V C3 S1 SING Y N 13 Y6V C4 C5 SING Y N 14 Y6V C10 C17 SING Y N 15 Y6V C12 C13 DOUB Y N 16 Y6V S1 C6 SING Y N 17 Y6V C5 C6 DOUB Y N 18 Y6V C17 C16 DOUB Y N 19 Y6V C13 C16 SING Y N 20 Y6V C13 N2 SING N N 21 Y6V C16 O3 SING N N 22 Y6V N2 C14 SING N N 23 Y6V O3 C15 SING N N 24 Y6V C14 C15 SING N N 25 Y6V C14 O2 DOUB N N 26 Y6V C2 H1 SING N N 27 Y6V C2 H2 SING N N 28 Y6V C4 H3 SING N N 29 Y6V C5 H4 SING N N 30 Y6V C6 H5 SING N N 31 Y6V C7 H6 SING N N 32 Y6V C8 H7 SING N N 33 Y6V C8 H8 SING N N 34 Y6V C9 H9 SING N N 35 Y6V C9 H10 SING N N 36 Y6V C11 H11 SING N N 37 Y6V C12 H12 SING N N 38 Y6V N2 H13 SING N N 39 Y6V C15 H14 SING N N 40 Y6V C15 H15 SING N N 41 Y6V C17 H16 SING N N 42 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y6V InChI InChI 1.03 "InChI=1S/C17H16N2O3S/c20-16-10-22-15-8-11(3-6-14(15)18-16)17(21)19(12-4-5-12)9-13-2-1-7-23-13/h1-3,6-8,12H,4-5,9-10H2,(H,18,20)" Y6V InChIKey InChI 1.03 XPHOPAPMJBSLFN-UHFFFAOYSA-N Y6V SMILES_CANONICAL CACTVS 3.385 "O=C1COc2cc(ccc2N1)C(=O)N(Cc3sccc3)C4CC4" Y6V SMILES CACTVS 3.385 "O=C1COc2cc(ccc2N1)C(=O)N(Cc3sccc3)C4CC4" Y6V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CN(C2CC2)C(=O)c3ccc4c(c3)OCC(=O)N4" Y6V SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CN(C2CC2)C(=O)c3ccc4c(c3)OCC(=O)N4" # _pdbx_chem_comp_identifier.comp_id Y6V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-cyclopropyl-3-oxidanylidene-~{N}-(thiophen-2-ylmethyl)-4~{H}-1,4-benzoxazine-7-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y6V "Create component" 2021-02-08 RCSB Y6V "Initial release" 2021-03-10 RCSB ##