data_YAT # _chem_comp.id YAT _chem_comp.name emetine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H40 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2S,3R,11bS)-2-[[(1R)-6,7-dimethoxy-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl]-3-ethyl-9,10-dimethoxy-2,3,4,6,7,11b-hexahydro-1H-benzo[a]quinolizine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-20 _chem_comp.pdbx_modified_date 2024-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.639 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FVY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAT CAA C1 C 0 1 N N N N N N 207.168 220.464 155.408 0.350 5.536 -0.058 CAA YAT 1 YAT CAJ C2 C 0 1 N N N N N N 207.348 221.367 156.641 0.654 4.193 -0.725 CAJ YAT 2 YAT CBE C3 C 0 1 N N R N N N 206.861 222.822 156.445 -0.339 3.140 -0.228 CBE YAT 3 YAT CAQ C4 C 0 1 N N N N N N 207.088 223.504 157.784 -1.751 3.510 -0.689 CAQ YAT 4 YAT NBI N1 N 0 1 N N N N N N 207.476 224.991 157.742 -2.703 2.491 -0.245 NBI YAT 5 YAT CAN C5 C 0 1 N N N N N N 206.634 226.387 158.050 -2.812 2.443 1.219 CAN YAT 6 YAT CAM C6 C 0 1 N N N N N N 207.383 227.416 158.372 -4.099 1.701 1.584 CAM YAT 7 YAT CAX C7 C 0 1 Y N N N N N 208.535 227.657 157.454 -4.181 0.402 0.823 CAX YAT 8 YAT CAG C8 C 0 1 Y N N N N N 209.082 228.983 157.386 -5.082 -0.560 1.260 CAG YAT 9 YAT CAZ C9 C 0 1 Y N N N N N 210.189 229.259 156.521 -5.197 -1.765 0.591 CAZ YAT 10 YAT OAT O1 O 0 1 N N N N N N 210.721 230.588 156.458 -6.081 -2.704 1.023 OAT YAT 11 YAT CAC C10 C 0 1 N N N N N N 212.104 230.672 156.713 -6.860 -2.379 2.176 CAC YAT 12 YAT CBB C11 C 0 1 Y N N N N N 210.763 228.208 155.717 -4.405 -2.012 -0.527 CBB YAT 13 YAT OAV O2 O 0 1 N N N N N N 211.851 228.508 154.871 -4.514 -3.192 -1.194 OAV YAT 14 YAT CAE C12 C 0 1 N N N N N N 212.444 227.414 154.192 -3.669 -3.375 -2.332 CAE YAT 15 YAT CAI C13 C 0 1 Y N N N N N 210.214 226.871 155.787 -3.507 -1.051 -0.956 CAI YAT 16 YAT CBD C14 C 0 1 Y N N N N N 209.107 226.593 156.644 -3.394 0.155 -0.280 CBD YAT 17 YAT CBH C15 C 0 1 N N S N N N 208.560 225.188 156.706 -2.393 1.165 -0.784 CBH YAT 18 YAT CAP C16 C 0 1 N N N N N N 207.943 224.878 155.324 -0.992 0.737 -0.337 CAP YAT 19 YAT CBF C17 C 0 1 N N S N N N 207.589 223.422 155.207 0.033 1.772 -0.807 CBF YAT 20 YAT CAO C18 C 0 1 N N N N N N 206.670 223.269 153.936 1.426 1.370 -0.319 CAO YAT 21 YAT CBG C19 C 0 1 N N R N N N 207.433 222.711 152.715 1.842 0.058 -0.986 CBG YAT 22 YAT NAR N2 N 0 1 N N N N N N 206.445 222.565 151.598 1.972 0.269 -2.431 NAR YAT 23 YAT CAK C20 C 0 1 N N N N N N 206.057 223.879 151.004 2.533 -0.931 -3.072 CAK YAT 24 YAT CAL C21 C 0 1 N N N N N N 207.228 224.711 150.540 4.008 -1.043 -2.685 CAL YAT 25 YAT CAW C22 C 0 1 Y N N N N N 208.490 224.525 151.305 4.158 -0.920 -1.190 CAW YAT 26 YAT CAF C23 C 0 1 Y N N N N N 209.613 225.363 150.941 5.345 -1.341 -0.610 CAF YAT 27 YAT CBC C24 C 0 1 Y N N N N N 208.616 223.632 152.300 3.153 -0.402 -0.405 CBC YAT 28 YAT CAH C25 C 0 1 Y N N N N N 209.875 223.501 152.988 3.332 -0.301 0.967 CAH YAT 29 YAT CBA C26 C 0 1 Y N N N N N 210.958 224.309 152.640 4.513 -0.721 1.553 CBA YAT 30 YAT OAU O3 O 0 1 N N N N N N 212.177 224.182 153.330 4.682 -0.619 2.898 OAU YAT 31 YAT CAD C27 C 0 1 N N N N N N 212.801 222.927 153.200 3.598 -0.069 3.649 CAD YAT 32 YAT CAY C28 C 0 1 Y N N N N N 210.827 225.239 151.616 5.529 -1.244 0.758 CAY YAT 33 YAT OAS O4 O 0 1 N N N N N N 211.921 226.058 151.258 6.695 -1.658 1.322 OAS YAT 34 YAT CAB C29 C 0 1 N N N N N N 213.032 225.351 150.786 7.691 -2.183 0.442 CAB YAT 35 YAT H3 H1 H 0 1 N N N N N N 207.539 219.454 155.636 1.058 6.286 -0.412 H3 YAT 36 YAT H2 H2 H 0 1 N N N N N N 206.101 220.412 155.144 -0.664 5.846 -0.310 H2 YAT 37 YAT H1 H3 H 0 1 N N N N N N 207.735 220.881 154.563 0.441 5.433 1.023 H1 YAT 38 YAT H5 H4 H 0 1 N N N N N N 206.784 220.925 157.476 0.563 4.296 -1.807 H5 YAT 39 YAT H4 H5 H 0 1 N N N N N N 208.418 221.394 156.894 1.668 3.883 -0.474 H4 YAT 40 YAT H6 H6 H 0 1 N N N N N N 205.781 222.803 156.236 -0.310 3.098 0.861 H6 YAT 41 YAT H8 H7 H 0 1 N N N N N N 206.157 223.418 158.364 -2.029 4.475 -0.264 H8 YAT 42 YAT H7 H8 H 0 1 N N N N N N 207.894 222.963 158.302 -1.771 3.574 -1.777 H7 YAT 43 YAT H11 H10 H 0 1 N N N N N N 206.061 226.648 157.148 -1.954 1.913 1.632 H11 YAT 44 YAT H10 H11 H 0 1 N N N N N N 205.941 226.193 158.882 -2.848 3.457 1.617 H10 YAT 45 YAT H12 H12 H 0 1 N N N N N N 207.780 227.248 159.384 -4.106 1.495 2.654 H12 YAT 46 YAT H13 H13 H 0 1 N N N N N N 206.749 228.315 158.371 -4.958 2.322 1.330 H13 YAT 47 YAT H14 H14 H 0 1 N N N N N N 208.658 229.773 157.988 -5.695 -0.366 2.127 H14 YAT 48 YAT H15 H15 H 0 1 N N N N N N 212.427 231.721 156.645 -7.522 -3.212 2.413 H15 YAT 49 YAT H17 H16 H 0 1 N N N N N N 212.315 230.289 157.722 -6.198 -2.190 3.021 H17 YAT 50 YAT H16 H17 H 0 1 N N N N N N 212.651 230.071 155.971 -7.455 -1.489 1.974 H16 YAT 51 YAT H18 H18 H 0 1 N N N N N N 213.275 227.776 153.569 -3.882 -2.601 -3.069 H18 YAT 52 YAT H19 H19 H 0 1 N N N N N N 212.825 226.690 154.927 -2.626 -3.307 -2.025 H19 YAT 53 YAT H20 H20 H 0 1 N N N N N N 211.692 226.928 153.554 -3.856 -4.355 -2.770 H20 YAT 54 YAT H21 H21 H 0 1 N N N N N N 210.643 226.081 155.189 -2.891 -1.242 -1.822 H21 YAT 55 YAT H22 H22 H 0 1 N N N N N N 209.382 224.483 156.898 -2.429 1.199 -1.873 H22 YAT 56 YAT H23 H23 H 0 1 N N N N N N 208.670 225.136 154.540 -0.964 0.666 0.751 H23 YAT 57 YAT H24 H24 H 0 1 N N N N N N 207.033 225.481 155.193 -0.753 -0.234 -0.770 H24 YAT 58 YAT H25 H25 H 0 1 N N N N N N 208.509 222.844 155.034 0.027 1.822 -1.895 H25 YAT 59 YAT H26 H26 H 0 1 N N N N N N 206.262 224.257 153.675 2.141 2.152 -0.577 H26 YAT 60 YAT H27 H27 H 0 1 N N N N N N 205.844 222.584 154.179 1.408 1.238 0.763 H27 YAT 61 YAT H28 H28 H 0 1 N N N N N N 207.836 221.721 152.974 1.080 -0.698 -0.799 H28 YAT 62 YAT H29 H29 H 0 1 N N N N N N 205.624 222.118 151.952 2.536 1.082 -2.629 H29 YAT 63 YAT H31 H31 H 0 1 N N N N N N 205.504 224.452 151.763 1.996 -1.815 -2.729 H31 YAT 64 YAT H32 H32 H 0 1 N N N N N N 205.403 223.689 150.140 2.441 -0.844 -4.155 H32 YAT 65 YAT H33 H33 H 0 1 N N N N N N 207.429 224.457 149.489 4.394 -2.009 -3.009 H33 YAT 66 YAT H34 H34 H 0 1 N N N N N N 206.941 225.770 150.613 4.571 -0.247 -3.171 H34 YAT 67 YAT H35 H35 H 0 1 N N N N N N 209.510 226.086 150.145 6.132 -1.746 -1.230 H35 YAT 68 YAT H36 H36 H 0 1 N N N N N N 209.981 222.773 153.778 2.544 0.108 1.582 H36 YAT 69 YAT H37 H37 H 0 1 N N N N N N 213.741 222.924 153.771 3.863 -0.045 4.706 H37 YAT 70 YAT H39 H38 H 0 1 N N N N N N 212.134 222.144 153.589 3.393 0.944 3.302 H39 YAT 71 YAT H38 H39 H 0 1 N N N N N N 213.016 222.733 152.139 2.711 -0.687 3.511 H38 YAT 72 YAT H42 H40 H 0 1 N N N N N N 213.835 226.058 150.530 7.971 -1.421 -0.286 H42 YAT 73 YAT H40 H41 H 0 1 N N N N N N 213.385 224.660 151.566 8.568 -2.475 1.019 H40 YAT 74 YAT H41 H42 H 0 1 N N N N N N 212.749 224.779 149.890 7.293 -3.054 -0.079 H41 YAT 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAT CAL CAK SING N N 1 YAT CAL CAW SING N N 2 YAT CAB OAS SING N N 3 YAT CAF CAW DOUB Y N 4 YAT CAF CAY SING Y N 5 YAT CAK NAR SING N N 6 YAT OAS CAY SING N N 7 YAT CAW CBC SING Y N 8 YAT NAR CBG SING N N 9 YAT CAY CBA DOUB Y N 10 YAT CBC CBG SING N N 11 YAT CBC CAH DOUB Y N 12 YAT CBA CAH SING Y N 13 YAT CBA OAU SING N N 14 YAT CBG CAO SING N N 15 YAT CAD OAU SING N N 16 YAT CAO CBF SING N N 17 YAT CAE OAV SING N N 18 YAT OAV CBB SING N N 19 YAT CBF CAP SING N N 20 YAT CBF CBE SING N N 21 YAT CAP CBH SING N N 22 YAT CAA CAJ SING N N 23 YAT CBB CAI DOUB Y N 24 YAT CBB CAZ SING Y N 25 YAT CAI CBD SING Y N 26 YAT CBE CAJ SING N N 27 YAT CBE CAQ SING N N 28 YAT OAT CAZ SING N N 29 YAT OAT CAC SING N N 30 YAT CAZ CAG DOUB Y N 31 YAT CBD CBH SING N N 32 YAT CBD CAX DOUB Y N 33 YAT CBH NBI SING N N 34 YAT CAG CAX SING Y N 35 YAT CAX CAM SING N N 36 YAT NBI CAQ SING N N 37 YAT NBI CAN SING N N 38 YAT CAN CAM SING N N 39 YAT CAA H3 SING N N 40 YAT CAA H2 SING N N 41 YAT CAA H1 SING N N 42 YAT CAJ H5 SING N N 43 YAT CAJ H4 SING N N 44 YAT CBE H6 SING N N 45 YAT CAQ H8 SING N N 46 YAT CAQ H7 SING N N 47 YAT CAN H11 SING N N 48 YAT CAN H10 SING N N 49 YAT CAM H12 SING N N 50 YAT CAM H13 SING N N 51 YAT CAG H14 SING N N 52 YAT CAC H15 SING N N 53 YAT CAC H17 SING N N 54 YAT CAC H16 SING N N 55 YAT CAE H18 SING N N 56 YAT CAE H19 SING N N 57 YAT CAE H20 SING N N 58 YAT CAI H21 SING N N 59 YAT CBH H22 SING N N 60 YAT CAP H23 SING N N 61 YAT CAP H24 SING N N 62 YAT CBF H25 SING N N 63 YAT CAO H26 SING N N 64 YAT CAO H27 SING N N 65 YAT CBG H28 SING N N 66 YAT NAR H29 SING N N 67 YAT CAK H31 SING N N 68 YAT CAK H32 SING N N 69 YAT CAL H33 SING N N 70 YAT CAL H34 SING N N 71 YAT CAF H35 SING N N 72 YAT CAH H36 SING N N 73 YAT CAD H37 SING N N 74 YAT CAD H39 SING N N 75 YAT CAD H38 SING N N 76 YAT CAB H42 SING N N 77 YAT CAB H40 SING N N 78 YAT CAB H41 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAT SMILES ACDLabs 12.01 "COc1cc2CCNC(CC3CC4c5cc(OC)c(OC)cc5CCN4CC3CC)c2cc1OC" YAT InChI InChI 1.06 "InChI=1S/C29H40N2O4/c1-6-18-17-31-10-8-20-14-27(33-3)29(35-5)16-23(20)25(31)12-21(18)11-24-22-15-28(34-4)26(32-2)13-19(22)7-9-30-24/h13-16,18,21,24-25,30H,6-12,17H2,1-5H3/t18-,21-,24+,25-/m0/s1" YAT InChIKey InChI 1.06 AUVVAXYIELKVAI-CKBKHPSWSA-N YAT SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1CN2CCc3cc(OC)c(OC)cc3[C@@H]2C[C@@H]1C[C@H]4NCCc5cc(OC)c(OC)cc45" YAT SMILES CACTVS 3.385 "CC[CH]1CN2CCc3cc(OC)c(OC)cc3[CH]2C[CH]1C[CH]4NCCc5cc(OC)c(OC)cc45" YAT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H]1CN2CCc3cc(c(cc3[C@@H]2C[C@@H]1C[C@@H]4c5cc(c(cc5CCN4)OC)OC)OC)OC" YAT SMILES "OpenEye OEToolkits" 2.0.7 "CCC1CN2CCc3cc(c(cc3C2CC1CC4c5cc(c(cc5CCN4)OC)OC)OC)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YAT "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-6',7',10,11-tetramethoxyemetan" YAT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},3~{R},11~{b}~{S})-2-[[(1~{R})-6,7-dimethoxy-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl]-3-ethyl-9,10-dimethoxy-2,3,4,6,7,11~{b}-hexahydro-1~{H}-benzo[a]quinolizine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAT "Create component" 2023-01-20 RCSB YAT "Modify name" 2023-01-24 RCSB YAT "Initial release" 2024-01-24 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id YAT _pdbx_chem_comp_synonyms.name "(2S,3R,11bS)-2-[[(1R)-6,7-dimethoxy-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl]-3-ethyl-9,10-dimethoxy-2,3,4,6,7,11b-hexahydro-1H-benzo[a]quinolizine" _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #