data_YHR # _chem_comp.id YHR _chem_comp.name reserpine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H40 N2 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "methyl (4R)-11,17beta-dimethoxy-18beta-[(3,4,5-trimethoxybenzoyl)oxy]-3beta,20alpha-yohimban-16beta-carboxylate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-17 _chem_comp.pdbx_modified_date 2023-10-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 608.679 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YHR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8T6A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YHR C4 C1 C 0 1 N N R 126.522 124.039 136.930 -1.186 0.430 -0.882 C4 YHR 1 YHR C3 C2 C 0 1 N N R 126.183 125.197 137.860 -0.469 1.684 -0.376 C3 YHR 2 YHR O2 O1 O 0 1 N N N 125.757 126.303 137.076 -1.200 2.845 -0.776 O2 YHR 3 YHR C1 C3 C 0 1 N N N 124.363 126.573 137.146 -2.187 3.264 0.169 C1 YHR 4 YHR C10 C4 C 0 1 N N N 130.553 121.125 141.437 3.915 -3.311 0.524 C10 YHR 5 YHR C11 C5 C 0 1 Y N N 130.520 122.544 141.920 4.584 -1.963 0.607 C11 YHR 6 YHR C12 C6 C 0 1 Y N N 129.401 123.316 141.820 3.949 -0.838 1.012 C12 YHR 7 YHR C13 C7 C 0 1 N N R 128.122 122.903 141.266 2.501 -0.836 1.428 C13 YHR 8 YHR C14 C8 C 0 1 N N N 127.354 124.015 140.566 1.799 0.438 0.984 C14 YHR 9 YHR C15 C9 C 0 1 N N S 128.125 124.482 139.333 1.724 0.497 -0.543 C15 YHR 10 YHR C16 C10 C 0 1 N N S 127.453 125.649 138.579 0.940 1.738 -0.970 C16 YHR 11 YHR C17 C11 C 0 1 N N N 127.200 126.823 139.489 1.646 2.973 -0.472 C17 YHR 12 YHR C20 C12 C 0 1 N N N 125.584 127.923 140.797 1.871 5.333 -0.222 C20 YHR 13 YHR C22 C13 C 0 1 Y N N 130.967 124.628 142.740 6.043 -0.201 0.551 C22 YHR 14 YHR C23 C14 C 0 1 Y N N 131.542 123.365 142.509 5.949 -1.594 0.300 C23 YHR 15 YHR C24 C15 C 0 1 Y N N 132.880 123.175 142.848 7.052 -2.327 -0.151 C24 YHR 16 YHR C25 C16 C 0 1 Y N N 133.615 124.214 143.396 8.223 -1.638 -0.338 C25 YHR 17 YHR C26 C17 C 0 1 Y N N 133.020 125.452 143.612 8.323 -0.273 -0.094 C26 YHR 18 YHR C27 C18 C 0 1 Y N N 131.689 125.678 143.288 7.244 0.477 0.353 C27 YHR 19 YHR C29 C19 C 0 1 N N N 135.030 126.345 144.535 10.597 -0.465 -0.760 C29 YHR 20 YHR C31 C20 C 0 1 N N N 125.468 122.898 135.103 -3.475 -0.226 -1.060 C31 YHR 21 YHR C33 C21 C 0 1 Y N N 124.177 122.687 134.398 -4.857 -0.316 -0.553 C33 YHR 22 YHR C34 C22 C 0 1 Y N N 123.051 123.408 134.786 -5.845 -0.942 -1.319 C34 YHR 23 YHR C35 C23 C 0 1 Y N N 121.866 123.261 134.092 -7.139 -1.025 -0.842 C35 YHR 24 YHR C36 C24 C 0 1 Y N N 121.793 122.387 133.006 -7.460 -0.486 0.401 C36 YHR 25 YHR C37 C25 C 0 1 Y N N 122.924 121.665 132.624 -6.478 0.138 1.167 C37 YHR 26 YHR C38 C26 C 0 1 Y N N 124.110 121.812 133.317 -5.181 0.219 0.697 C38 YHR 27 YHR C40 C27 C 0 1 N N N 123.894 120.094 131.114 -5.739 1.289 3.112 C40 YHR 28 YHR C42 C28 C 0 1 N N N 119.734 121.251 132.766 -9.066 -1.721 1.644 C42 YHR 29 YHR C44 C29 C 0 1 N N N 120.784 124.939 135.395 -7.701 -2.164 -2.853 C44 YHR 30 YHR C5 C30 C 0 1 N N N 127.024 122.860 137.737 -0.404 -0.812 -0.452 C5 YHR 31 YHR C6 C31 C 0 1 N N S 128.338 123.273 138.405 1.005 -0.760 -1.046 C6 YHR 32 YHR C7 C32 C 0 1 N N N 129.031 122.103 139.098 1.793 -1.990 -0.591 C7 YHR 33 YHR C9 C33 C 0 1 N N N 129.145 120.660 141.108 2.591 -3.243 1.298 C9 YHR 34 YHR N21 N1 N 0 1 Y N N 129.652 124.580 142.311 4.815 0.221 0.977 N21 YHR 35 YHR N8 N2 N 0 1 N N N 128.348 121.706 140.380 1.853 -2.034 0.878 N8 YHR 36 YHR O18 O2 O 0 1 N N N 128.019 127.642 139.802 2.671 2.870 0.160 O18 YHR 37 YHR O19 O3 O 0 1 N N N 125.941 126.834 139.913 1.137 4.188 -0.732 O19 YHR 38 YHR O28 O4 O 0 1 N N N 133.673 126.525 144.152 9.515 0.347 -0.300 O28 YHR 39 YHR O30 O5 O 0 1 N N N 125.319 123.667 136.196 -2.524 0.378 -0.320 O30 YHR 40 YHR O32 O6 O 0 1 N N N 126.524 122.447 134.736 -3.194 -0.695 -2.145 O32 YHR 41 YHR O39 O7 O 0 1 N N N 122.762 120.843 131.546 -6.795 0.664 2.380 O39 YHR 42 YHR O41 O8 O 0 1 N N N 120.619 122.263 132.296 -8.733 -0.569 0.868 O41 YHR 43 YHR O43 O9 O 0 1 N N N 120.722 123.950 134.372 -8.100 -1.633 -1.587 O43 YHR 44 YHR H1 H1 H 0 1 N N N 127.307 124.358 136.229 -1.250 0.462 -1.970 H1 YHR 45 YHR H2 H2 H 0 1 N N N 125.419 124.892 138.590 -0.405 1.651 0.712 H2 YHR 46 YHR H3 H3 H 0 1 N N N 124.125 127.440 136.512 -2.911 2.464 0.318 H3 YHR 47 YHR H4 H4 H 0 1 N N N 123.801 125.695 136.793 -1.704 3.499 1.118 H4 YHR 48 YHR H5 H5 H 0 1 N N N 124.084 126.792 138.187 -2.697 4.151 -0.207 H5 YHR 49 YHR H6 H6 H 0 1 N N N 130.976 120.482 142.223 3.718 -3.560 -0.519 H6 YHR 50 YHR H7 H7 H 0 1 N N N 131.179 121.061 140.535 4.561 -4.069 0.967 H7 YHR 51 YHR H8 H8 H 0 1 N N N 127.494 122.565 142.103 2.452 -0.883 2.516 H8 YHR 52 YHR H9 H9 H 0 1 N N N 127.225 124.861 141.258 0.791 0.456 1.397 H9 YHR 53 YHR H10 H10 H 0 1 N N N 126.367 123.639 140.258 2.355 1.301 1.349 H10 YHR 54 YHR H11 H11 H 0 1 N N N 129.115 124.826 139.666 2.731 0.532 -0.958 H11 YHR 55 YHR H12 H12 H 0 1 N N N 128.162 125.981 137.806 0.874 1.771 -2.057 H12 YHR 56 YHR H13 H13 H 0 1 N N N 124.526 127.832 141.083 1.353 6.250 -0.502 H13 YHR 57 YHR H14 H14 H 0 1 N N N 126.212 127.884 141.699 1.936 5.268 0.864 H14 YHR 58 YHR H15 H15 H 0 1 N N N 125.743 128.881 140.281 2.875 5.339 -0.647 H15 YHR 59 YHR H16 H16 H 0 1 N N N 133.346 122.215 142.683 6.984 -3.388 -0.343 H16 YHR 60 YHR H17 H17 H 0 1 N N N 134.652 124.062 143.656 9.095 -2.172 -0.686 H17 YHR 61 YHR H18 H18 H 0 1 N N N 131.230 126.641 143.457 7.331 1.538 0.539 H18 YHR 62 YHR H19 H19 H 0 1 N N N 135.422 127.285 144.950 10.332 -0.915 -1.717 H19 YHR 63 YHR H20 H20 H 0 1 N N N 135.094 125.553 145.296 11.487 0.152 -0.883 H20 YHR 64 YHR H21 H21 H 0 1 N N N 135.624 126.057 143.655 10.797 -1.251 -0.032 H21 YHR 65 YHR H22 H22 H 0 1 N N N 123.104 124.081 135.629 -5.596 -1.360 -2.284 H22 YHR 66 YHR H23 H23 H 0 1 N N N 124.983 121.250 133.021 -4.420 0.703 1.291 H23 YHR 67 YHR H24 H24 H 0 1 N N N 123.618 119.481 130.243 -6.126 1.665 4.059 H24 YHR 68 YHR H25 H25 H 0 1 N N N 124.705 120.783 130.835 -4.950 0.562 3.305 H25 YHR 69 YHR H26 H26 H 0 1 N N N 124.234 119.440 131.930 -5.335 2.118 2.530 H26 YHR 70 YHR H27 H27 H 0 1 N N N 118.832 121.231 132.137 -8.427 -1.762 2.527 H27 YHR 71 YHR H28 H28 H 0 1 N N N 120.236 120.273 132.717 -10.109 -1.663 1.954 H28 YHR 72 YHR H29 H29 H 0 1 N N N 119.451 121.466 133.807 -8.915 -2.619 1.045 H29 YHR 73 YHR H30 H30 H 0 1 N N N 119.797 125.410 135.511 -8.561 -2.620 -3.343 H30 YHR 74 YHR H31 H31 H 0 1 N N N 121.079 124.467 136.344 -7.312 -1.359 -3.477 H31 YHR 75 YHR H32 H32 H 0 1 N N N 121.525 125.704 135.120 -6.926 -2.915 -2.704 H32 YHR 76 YHR H33 H33 H 0 1 N N N 126.283 122.590 138.504 -0.339 -0.842 0.635 H33 YHR 77 YHR H34 H34 H 0 1 N N N 127.196 121.999 137.074 -0.916 -1.705 -0.810 H34 YHR 78 YHR H35 H35 H 0 1 N N N 129.010 123.608 137.601 0.944 -0.746 -2.134 H35 YHR 79 YHR H36 H36 H 0 1 N N N 129.032 121.240 138.417 1.303 -2.891 -0.961 H36 YHR 80 YHR H37 H37 H 0 1 N N N 130.068 122.392 139.325 2.805 -1.941 -0.993 H37 YHR 81 YHR H38 H38 H 0 1 N N N 128.627 120.412 142.046 1.994 -4.129 1.080 H38 YHR 82 YHR H39 H39 H 0 1 N N N 129.209 119.762 140.476 2.795 -3.193 2.368 H39 YHR 83 YHR H40 H40 H 0 1 N N N 128.996 125.333 142.350 4.591 1.134 1.218 H40 YHR 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YHR C40 O39 SING N N 1 YHR O39 C37 SING N N 2 YHR O41 C42 SING N N 3 YHR O41 C36 SING N N 4 YHR C37 C36 DOUB Y N 5 YHR C37 C38 SING Y N 6 YHR C36 C35 SING Y N 7 YHR C38 C33 DOUB Y N 8 YHR C35 O43 SING N N 9 YHR C35 C34 DOUB Y N 10 YHR O43 C44 SING N N 11 YHR C33 C34 SING Y N 12 YHR C33 C31 SING N N 13 YHR O32 C31 DOUB N N 14 YHR C31 O30 SING N N 15 YHR O30 C4 SING N N 16 YHR C4 C5 SING N N 17 YHR C4 C3 SING N N 18 YHR O2 C1 SING N N 19 YHR O2 C3 SING N N 20 YHR C5 C6 SING N N 21 YHR C3 C16 SING N N 22 YHR C6 C7 SING N N 23 YHR C6 C15 SING N N 24 YHR C16 C15 SING N N 25 YHR C16 C17 SING N N 26 YHR C7 N8 SING N N 27 YHR C15 C14 SING N N 28 YHR C17 O18 DOUB N N 29 YHR C17 O19 SING N N 30 YHR O19 C20 SING N N 31 YHR N8 C9 SING N N 32 YHR N8 C13 SING N N 33 YHR C14 C13 SING N N 34 YHR C9 C10 SING N N 35 YHR C13 C12 SING N N 36 YHR C10 C11 SING N N 37 YHR C12 C11 DOUB Y N 38 YHR C12 N21 SING Y N 39 YHR C11 C23 SING Y N 40 YHR N21 C22 SING Y N 41 YHR C23 C22 DOUB Y N 42 YHR C23 C24 SING Y N 43 YHR C22 C27 SING Y N 44 YHR C24 C25 DOUB Y N 45 YHR C27 C26 DOUB Y N 46 YHR C25 C26 SING Y N 47 YHR C26 O28 SING N N 48 YHR O28 C29 SING N N 49 YHR C4 H1 SING N N 50 YHR C3 H2 SING N N 51 YHR C1 H3 SING N N 52 YHR C1 H4 SING N N 53 YHR C1 H5 SING N N 54 YHR C10 H6 SING N N 55 YHR C10 H7 SING N N 56 YHR C13 H8 SING N N 57 YHR C14 H9 SING N N 58 YHR C14 H10 SING N N 59 YHR C15 H11 SING N N 60 YHR C16 H12 SING N N 61 YHR C20 H13 SING N N 62 YHR C20 H14 SING N N 63 YHR C20 H15 SING N N 64 YHR C24 H16 SING N N 65 YHR C25 H17 SING N N 66 YHR C27 H18 SING N N 67 YHR C29 H19 SING N N 68 YHR C29 H20 SING N N 69 YHR C29 H21 SING N N 70 YHR C34 H22 SING N N 71 YHR C38 H23 SING N N 72 YHR C40 H24 SING N N 73 YHR C40 H25 SING N N 74 YHR C40 H26 SING N N 75 YHR C42 H27 SING N N 76 YHR C42 H28 SING N N 77 YHR C42 H29 SING N N 78 YHR C44 H30 SING N N 79 YHR C44 H31 SING N N 80 YHR C44 H32 SING N N 81 YHR C5 H33 SING N N 82 YHR C5 H34 SING N N 83 YHR C6 H35 SING N N 84 YHR C7 H36 SING N N 85 YHR C7 H37 SING N N 86 YHR C9 H38 SING N N 87 YHR C9 H39 SING N N 88 YHR N21 H40 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YHR SMILES ACDLabs 12.01 "COc1cc(cc(OC)c1OC)C(=O)OC1CC2CN3CCc4c5ccc(OC)cc5[NH]c4C3CC2C(C1OC)C(=O)OC" YHR InChI InChI 1.06 "InChI=1S/C33H40N2O9/c1-38-19-7-8-20-21-9-10-35-16-18-13-27(44-32(36)17-11-25(39-2)30(41-4)26(12-17)40-3)31(42-5)28(33(37)43-6)22(18)15-24(35)29(21)34-23(20)14-19/h7-8,11-12,14,18,22,24,27-28,31,34H,9-10,13,15-16H2,1-6H3/t18-,22+,24-,27-,28+,31+/m1/s1" YHR InChIKey InChI 1.06 QEVHRUUCFGRFIF-MDEJGZGSSA-N YHR SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1[C@@H](C[C@@H]2CN3CCc4c([nH]c5cc(OC)ccc45)[C@H]3C[C@@H]2[C@@H]1C(=O)OC)OC(=O)c6cc(OC)c(OC)c(OC)c6" YHR SMILES CACTVS 3.385 "CO[CH]1[CH](C[CH]2CN3CCc4c([nH]c5cc(OC)ccc45)[CH]3C[CH]2[CH]1C(=O)OC)OC(=O)c6cc(OC)c(OC)c(OC)c6" YHR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)[nH]c3c2CCN4[C@@H]3C[C@H]5[C@@H](C4)C[C@H]([C@@H]([C@H]5C(=O)OC)OC)OC(=O)c6cc(c(c(c6)OC)OC)OC" YHR SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)[nH]c3c2CCN4C3CC5C(C4)CC(C(C5C(=O)OC)OC)OC(=O)c6cc(c(c(c6)OC)OC)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YHR "SYSTEMATIC NAME" ACDLabs 12.01 "methyl (4R)-11,17beta-dimethoxy-18beta-[(3,4,5-trimethoxybenzoyl)oxy]-3beta,20alpha-yohimban-16beta-carboxylate" YHR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl (1~{R},15~{S},17~{R},18~{R},19~{S},20~{S})-6,18-dimethoxy-17-(3,4,5-trimethoxyphenyl)carbonyloxy-1,3,11,12,14,15,16,17,18,19,20,21-dodecahydroyohimban-19-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YHR "Create component" 2023-06-17 RCSB YHR "Initial release" 2023-11-01 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id YHR _pdbx_chem_comp_synonyms.name "methyl (4R)-11,17beta-dimethoxy-18beta-[(3,4,5-trimethoxybenzoyl)oxy]-3beta,20alpha-yohimban-16beta-carboxylate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #