data_YLZ # _chem_comp.id YLZ _chem_comp.name "[(2~{R})-2,3-bis(oxidanyl)propoxy]-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]borinic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H12 B F3 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-19 _chem_comp.pdbx_modified_date 2024-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.998 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YLZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PF8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YLZ B1 B1 B 0 1 N N N N N N -55.591 49.330 -34.703 -0.893 -1.163 -0.012 B1 YLZ 1 YLZ C1 C1 C 0 1 Y N N N N N -52.698 51.193 -36.162 2.628 0.115 -0.024 C1 YLZ 2 YLZ C2 C2 C 0 1 Y N N N N N -53.298 50.557 -35.074 1.256 0.373 -0.050 C2 YLZ 3 YLZ C3 C3 C 0 1 Y N N N N N -54.525 50.111 -35.522 0.649 -0.868 -0.007 C3 YLZ 4 YLZ C4 C4 C 0 1 N N N N N N -51.357 51.845 -36.242 3.726 1.147 -0.053 C4 YLZ 5 YLZ C5 C5 C 0 1 N N N N N N -55.676 50.284 -37.807 1.475 -3.238 0.098 C5 YLZ 6 YLZ C6 C6 C 0 1 N N N N N N -57.622 48.045 -34.607 -3.189 -0.503 -0.077 C6 YLZ 7 YLZ C7 C7 C 0 1 N N R N N N -57.210 46.616 -34.354 -4.094 0.729 -0.144 C7 YLZ 8 YLZ C8 C8 C 0 1 N N N N N N -56.797 45.898 -35.622 -5.552 0.284 -0.274 C8 YLZ 9 YLZ F1 F1 F 0 1 N N N N N N -50.506 51.148 -36.981 4.856 0.609 -0.678 F1 YLZ 10 YLZ F2 F2 F 0 1 N N N N N N -51.417 53.056 -36.780 3.291 2.272 -0.763 F2 YLZ 11 YLZ F3 F3 F 0 1 N N N N N N -50.797 51.986 -35.051 4.051 1.520 1.256 F3 YLZ 12 YLZ N1 N1 N 0 1 Y N N N N N -54.598 50.501 -36.850 1.658 -1.786 0.042 N1 YLZ 13 YLZ N2 N2 N 0 1 Y N N N N N -53.470 51.169 -37.244 2.791 -1.182 0.036 N2 YLZ 14 YLZ O1 O1 O 0 1 N N N N N N -56.623 48.693 -35.330 -1.821 -0.089 -0.073 O1 YLZ 15 YLZ O2 O2 O 0 1 N N N N N N -57.687 44.831 -35.919 -6.386 1.431 -0.453 O2 YLZ 16 YLZ O4 O4 O 0 1 N N N N N N -55.513 49.266 -33.357 -1.360 -2.503 0.037 O4 YLZ 17 YLZ H1 H1 H 0 1 N N N N N N -52.886 50.438 -34.083 0.772 1.338 -0.094 H1 YLZ 18 YLZ H2 H2 H 0 1 N N N N N N -55.400 50.723 -38.777 1.442 -3.640 -0.914 H2 YLZ 19 YLZ H3 H3 H 0 1 N N N N N N -55.846 49.204 -37.929 2.307 -3.688 0.640 H3 YLZ 20 YLZ H4 H4 H 0 1 N N N N N N -56.596 50.760 -37.437 0.541 -3.468 0.611 H4 YLZ 21 YLZ H5 H5 H 0 1 N N N N N N -57.772 48.559 -33.646 -3.402 -1.062 0.834 H5 YLZ 22 YLZ H6 H6 H 0 1 N N N N N N -58.560 48.060 -35.182 -3.374 -1.137 -0.944 H6 YLZ 23 YLZ H7 H7 H 0 1 N N N N N N -57.994 46.061 -33.818 -3.820 1.335 -1.008 H7 YLZ 24 YLZ H8 H8 H 0 1 N N N N N N -55.782 45.494 -35.492 -5.655 -0.377 -1.134 H8 YLZ 25 YLZ H9 H9 H 0 1 N N N N N N -56.802 46.613 -36.458 -5.852 -0.246 0.630 H9 YLZ 26 YLZ H10 H10 H 0 1 N N N N N N -57.407 44.397 -36.717 -7.326 1.224 -0.543 H10 YLZ 27 YLZ O3 O3 O 0 1 N N N N N N ? ? ? -3.936 1.501 1.048 O3 YLZ 28 YLZ H11 H11 H 0 1 N N N N N N ? ? ? -4.163 1.024 1.859 H11 YLZ 29 YLZ H12 H12 H 0 1 N N N N N N -56.239 48.753 -33.021 -2.324 -2.584 0.029 H12 YLZ 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YLZ C5 N1 SING N N 1 YLZ N2 N1 SING Y N 2 YLZ N2 C1 DOUB Y N 3 YLZ F1 C4 SING N N 4 YLZ N1 C3 SING Y N 5 YLZ F2 C4 SING N N 6 YLZ C4 C1 SING N N 7 YLZ C4 F3 SING N N 8 YLZ C1 C2 SING Y N 9 YLZ O2 C8 SING N N 10 YLZ C8 C7 SING N N 11 YLZ C3 C2 DOUB Y N 12 YLZ C3 B1 SING N N 13 YLZ O1 B1 SING N N 14 YLZ O1 C6 SING N N 15 YLZ B1 O4 SING N N 16 YLZ C6 C7 SING N N 17 YLZ C2 H1 SING N N 18 YLZ C5 H2 SING N N 19 YLZ C5 H3 SING N N 20 YLZ C5 H4 SING N N 21 YLZ C6 H5 SING N N 22 YLZ C6 H6 SING N N 23 YLZ C7 H7 SING N N 24 YLZ C8 H8 SING N N 25 YLZ C8 H9 SING N N 26 YLZ O2 H10 SING N N 27 YLZ C7 O3 SING N N 28 YLZ O3 H11 SING N N 29 YLZ O4 H12 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YLZ InChI InChI 1.06 "InChI=1S/C8H12BF3N2O4/c1-14-7(2-6(13-14)8(10,11)12)9(17)18-4-5(16)3-15/h2,5,15-17H,3-4H2,1H3" YLZ InChIKey InChI 1.06 YSSTVIJJFZPQNG-UHFFFAOYSA-N YLZ SMILES_CANONICAL CACTVS 3.385 "Cn1nc(cc1B(O)OC[C@H](O)CO)C(F)(F)F" YLZ SMILES CACTVS 3.385 "Cn1nc(cc1B(O)OC[CH](O)CO)C(F)(F)F" YLZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1cc(nn1C)C(F)(F)F)(O)OC[C@@H](CO)O" YLZ SMILES "OpenEye OEToolkits" 2.0.7 "B(c1cc(nn1C)C(F)(F)F)(O)OCC(CO)O" # _pdbx_chem_comp_identifier.comp_id YLZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R})-2,3-bis(oxidanyl)propoxy]-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]borinic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YLZ "Create component" 2023-06-19 PDBE YLZ "Modify linking type" 2023-06-27 PDBE YLZ "Modify aromatic_flag" 2023-08-10 PDBE YLZ "Initial release" 2024-01-24 RCSB #