data_YN1 # _chem_comp.id YN1 _chem_comp.name "(1S,2S)-1-hydroxy-2-((S)-4-methyl-2-(((((1s,4S)-4-propylcyclohexyl)methoxy)carbonyl)amino)pentanamido)-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H43 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-12 _chem_comp.pdbx_modified_date 2021-03-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 533.679 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YN1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LZT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YN1 C13 C1 C 0 1 N N S 10.486 5.039 22.143 0.455 0.179 -0.540 C13 YN1 1 YN1 C01 C2 C 0 1 N N S 7.714 2.085 19.644 4.223 1.091 1.804 C01 YN1 2 YN1 C03 C3 C 0 1 N N S 7.602 3.558 20.028 3.884 -0.231 1.113 C03 YN1 3 YN1 C04 C4 C 0 1 N N N 7.147 4.434 18.836 5.133 -0.780 0.421 C04 YN1 4 YN1 C05 C5 C 0 1 N N S 6.824 5.913 19.258 4.830 -2.165 -0.154 C05 YN1 5 YN1 C06 C6 C 0 1 N N N 6.398 6.779 17.982 6.051 -2.730 -0.844 C06 YN1 6 YN1 C08 C7 C 0 1 N N N 4.974 7.267 19.800 5.182 -4.463 0.435 C08 YN1 7 YN1 C09 C8 C 0 1 N N N 5.809 5.987 20.161 4.538 -3.171 0.984 C09 YN1 8 YN1 C12 C9 C 0 1 N N N 9.048 4.637 21.780 1.536 -0.052 0.484 C12 YN1 9 YN1 C14 C10 C 0 1 N N N 11.071 4.009 23.059 0.618 1.574 -1.147 C14 YN1 10 YN1 C15 C11 C 0 1 N N N 12.586 4.270 23.253 -0.400 1.762 -2.273 C15 YN1 11 YN1 C16 C12 C 0 1 N N N 13.397 3.863 21.991 -0.323 3.198 -2.796 C16 YN1 12 YN1 C17 C13 C 0 1 N N N 13.089 3.530 24.524 -0.090 0.787 -3.410 C17 YN1 13 YN1 C19 C14 C 0 1 N N N 9.621 7.395 22.140 -1.941 -0.256 -0.626 C19 YN1 14 YN1 C21 C15 C 0 1 N N N 8.557 9.575 22.391 -4.269 -0.712 -0.882 C21 YN1 15 YN1 C22 C16 C 0 1 N N N 9.547 10.752 22.678 -5.545 -0.770 -0.039 C22 YN1 16 YN1 C23 C17 C 0 1 N N N 8.996 12.017 22.021 -5.871 0.629 0.489 C23 YN1 17 YN1 C24 C18 C 0 1 N N N 9.789 13.272 22.410 -7.147 0.571 1.331 C24 YN1 18 YN1 C25 C19 C 0 1 N N N 9.758 13.448 23.924 -8.306 0.070 0.467 C25 YN1 19 YN1 C26 C20 C 0 1 N N N 10.533 14.728 24.348 -9.582 0.012 1.309 C26 YN1 20 YN1 C27 C21 C 0 1 N N N 9.680 16.039 24.108 -10.765 -0.369 0.417 C27 YN1 21 YN1 C28 C22 C 0 1 N N N 10.306 17.294 24.826 -12.041 -0.426 1.259 C28 YN1 22 YN1 C29 C23 C 0 1 N N N 10.352 12.239 24.640 -7.980 -1.329 -0.061 C29 YN1 23 YN1 C30 C24 C 0 1 N N N 9.767 10.885 24.182 -6.704 -1.271 -0.903 C30 YN1 24 YN1 N07 N1 N 0 1 N N N 5.322 7.562 18.310 6.228 -4.016 -0.493 N07 YN1 25 YN1 N11 N2 N 0 1 N N N 8.894 3.991 20.494 2.833 -0.006 0.118 N11 YN1 26 YN1 N18 N3 N 0 1 N N N 10.443 6.347 22.766 -0.857 0.076 0.103 N18 YN1 27 YN1 O02 O1 O 0 1 N N N 6.437 1.592 19.355 5.326 0.896 2.691 O02 YN1 28 YN1 O10 O2 O 0 1 N N N 6.925 6.756 16.913 6.767 -2.114 -1.605 O10 YN1 29 YN1 O20 O3 O 0 1 N N N 9.090 8.388 23.026 -3.147 -0.350 -0.035 O20 YN1 30 YN1 O31 O4 O 0 1 N N N 9.426 7.403 20.959 -1.829 -0.470 -1.817 O31 YN1 31 YN1 O32 O5 O 0 1 N N N 8.108 4.842 22.495 1.240 -0.281 1.638 O32 YN1 32 YN1 H1 H1 H 0 1 N N N 11.083 5.084 21.220 0.534 -0.571 -1.327 H1 YN1 33 YN1 S1 S1 S 0 1 N Y N 8.358 1.969 18.797 4.664 2.331 0.555 S1 YN1 34 YN1 H3 H3 H 0 1 N N N 8.077 1.563 20.541 3.359 1.438 2.371 H3 YN1 35 YN1 H4 H4 H 0 1 N N N 6.861 3.657 20.835 3.534 -0.949 1.855 H4 YN1 36 YN1 H5 H5 H 0 1 N N N 6.243 3.988 18.397 5.426 -0.108 -0.385 H5 YN1 37 YN1 H6 H6 H 0 1 N N N 7.950 4.450 18.084 5.945 -0.856 1.144 H6 YN1 38 YN1 H7 H7 H 0 1 N N N 7.744 6.356 19.668 3.988 -2.115 -0.844 H7 YN1 39 YN1 H8 H8 H 0 1 N N N 5.265 8.113 20.441 5.622 -5.041 1.248 H8 YN1 40 YN1 H9 H9 H 0 1 N N N 3.897 7.073 19.915 4.438 -5.061 -0.093 H9 YN1 41 YN1 H10 H10 H 0 1 N N N 5.176 5.090 20.093 5.017 -2.860 1.912 H10 YN1 42 YN1 H11 H11 H 0 1 N N N 6.214 6.074 21.180 3.465 -3.300 1.125 H11 YN1 43 YN1 H12 H12 H 0 1 N N N 10.565 4.060 24.034 0.451 2.327 -0.377 H12 YN1 44 YN1 H13 H13 H 0 1 N N N 10.927 3.010 22.623 1.626 1.681 -1.547 H13 YN1 45 YN1 H14 H14 H 0 1 N N N 12.727 5.349 23.412 -1.403 1.568 -1.892 H14 YN1 46 YN1 H15 H15 H 0 1 N N N 14.466 4.061 22.162 0.680 3.392 -3.177 H15 YN1 47 YN1 H16 H16 H 0 1 N N N 13.250 2.791 21.791 -1.048 3.332 -3.598 H16 YN1 48 YN1 H17 H17 H 0 1 N N N 13.049 4.449 21.127 -0.544 3.892 -1.986 H17 YN1 49 YN1 H18 H18 H 0 1 N N N 12.492 3.844 25.392 0.913 0.981 -3.791 H18 YN1 50 YN1 H19 H19 H 0 1 N N N 12.985 2.444 24.381 -0.145 -0.235 -3.038 H19 YN1 51 YN1 H20 H20 H 0 1 N N N 14.147 3.777 24.698 -0.815 0.922 -4.213 H20 YN1 52 YN1 H21 H21 H 0 1 N N N 7.566 9.809 22.806 -4.086 -1.688 -1.331 H21 YN1 53 YN1 H22 H22 H 0 1 N N N 8.471 9.413 21.306 -4.386 0.033 -1.668 H22 YN1 54 YN1 H23 H23 H 0 1 N N N 10.510 10.507 22.206 -5.397 -1.449 0.799 H23 YN1 55 YN1 H24 H24 H 0 1 N N N 7.950 12.150 22.333 -5.045 0.986 1.105 H24 YN1 56 YN1 H25 H25 H 0 1 N N N 9.040 11.896 20.929 -6.020 1.309 -0.350 H25 YN1 57 YN1 H26 H26 H 0 1 N N N 10.831 13.165 22.075 -6.999 -0.109 2.170 H26 YN1 58 YN1 H27 H27 H 0 1 N N N 9.338 14.153 21.930 -7.379 1.567 1.708 H27 YN1 59 YN1 H28 H28 H 0 1 N N N 8.711 13.561 24.241 -8.455 0.750 -0.372 H28 YN1 60 YN1 H29 H29 H 0 1 N N N 10.781 14.656 25.417 -9.465 -0.733 2.096 H29 YN1 61 YN1 H30 H30 H 0 1 N N N 11.460 14.794 23.760 -9.766 0.988 1.758 H30 YN1 62 YN1 H31 H31 H 0 1 N N N 9.631 16.237 23.027 -10.882 0.377 -0.369 H31 YN1 63 YN1 H32 H32 H 0 1 N N N 8.664 15.877 24.498 -10.582 -1.345 -0.032 H32 YN1 64 YN1 H33 H33 H 0 1 N N N 9.681 18.178 24.631 -11.924 -1.172 2.046 H33 YN1 65 YN1 H34 H34 H 0 1 N N N 10.354 17.110 25.909 -12.225 0.550 1.708 H34 YN1 66 YN1 H35 H35 H 0 1 N N N 11.320 17.470 24.439 -12.884 -0.698 0.624 H35 YN1 67 YN1 H36 H36 H 0 1 N N N 11.436 12.227 24.456 -7.832 -2.009 0.778 H36 YN1 68 YN1 H37 H37 H 0 1 N N N 10.164 12.349 25.718 -8.806 -1.686 -0.677 H37 YN1 69 YN1 H38 H38 H 0 1 N N N 8.797 10.746 24.682 -6.853 -0.591 -1.742 H38 YN1 70 YN1 H39 H39 H 0 1 N N N 10.459 10.090 24.497 -6.472 -2.267 -1.280 H39 YN1 71 YN1 H40 H40 H 0 1 N N N 4.849 8.203 17.706 6.953 -4.576 -0.812 H40 YN1 72 YN1 H41 H41 H 0 1 N N N 9.699 3.843 19.919 3.070 0.177 -0.805 H41 YN1 73 YN1 H42 H42 H 0 1 N N N 10.960 6.533 23.602 -0.946 0.247 1.054 H42 YN1 74 YN1 H43 H43 H 0 1 N N N 6.498 0.675 19.115 6.132 0.587 2.255 H43 YN1 75 YN1 O1 O6 O 0 1 N Y N ? ? ? 5.836 1.938 -0.146 O1 YN1 76 YN1 O2 O7 O 0 1 N Y N ? ? ? 3.506 2.769 -0.142 O2 YN1 77 YN1 O3 O8 O 0 1 N Y N ? ? ? 5.098 3.546 1.362 O3 YN1 78 YN1 H2 H2 H 0 1 N Y N ? ? ? 5.367 4.301 0.822 H2 YN1 79 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YN1 O10 C06 DOUB N N 1 YN1 C06 N07 SING N N 2 YN1 C06 C05 SING N N 3 YN1 N07 C08 SING N N 4 YN1 C04 C05 SING N N 5 YN1 C04 C03 SING N N 6 YN1 C05 C09 SING N N 7 YN1 O02 C01 SING N N 8 YN1 C01 C03 SING N N 9 YN1 C08 C09 SING N N 10 YN1 C03 N11 SING N N 11 YN1 N11 C12 SING N N 12 YN1 O31 C19 DOUB N N 13 YN1 C12 C13 SING N N 14 YN1 C12 O32 DOUB N N 15 YN1 C16 C15 SING N N 16 YN1 C23 C24 SING N N 17 YN1 C23 C22 SING N N 18 YN1 C19 N18 SING N N 19 YN1 C19 O20 SING N N 20 YN1 C13 N18 SING N N 21 YN1 C13 C14 SING N N 22 YN1 C21 C22 SING N N 23 YN1 C21 O20 SING N N 24 YN1 C24 C25 SING N N 25 YN1 C22 C30 SING N N 26 YN1 C14 C15 SING N N 27 YN1 C15 C17 SING N N 28 YN1 C25 C26 SING N N 29 YN1 C25 C29 SING N N 30 YN1 C27 C26 SING N N 31 YN1 C27 C28 SING N N 32 YN1 C30 C29 SING N N 33 YN1 C13 H1 SING N N 34 YN1 C01 S1 SING N N 35 YN1 C01 H3 SING N N 36 YN1 C03 H4 SING N N 37 YN1 C04 H5 SING N N 38 YN1 C04 H6 SING N N 39 YN1 C05 H7 SING N N 40 YN1 C08 H8 SING N N 41 YN1 C08 H9 SING N N 42 YN1 C09 H10 SING N N 43 YN1 C09 H11 SING N N 44 YN1 C14 H12 SING N N 45 YN1 C14 H13 SING N N 46 YN1 C15 H14 SING N N 47 YN1 C16 H15 SING N N 48 YN1 C16 H16 SING N N 49 YN1 C16 H17 SING N N 50 YN1 C17 H18 SING N N 51 YN1 C17 H19 SING N N 52 YN1 C17 H20 SING N N 53 YN1 C21 H21 SING N N 54 YN1 C21 H22 SING N N 55 YN1 C22 H23 SING N N 56 YN1 C23 H24 SING N N 57 YN1 C23 H25 SING N N 58 YN1 C24 H26 SING N N 59 YN1 C24 H27 SING N N 60 YN1 C25 H28 SING N N 61 YN1 C26 H29 SING N N 62 YN1 C26 H30 SING N N 63 YN1 C27 H31 SING N N 64 YN1 C27 H32 SING N N 65 YN1 C28 H33 SING N N 66 YN1 C28 H34 SING N N 67 YN1 C28 H35 SING N N 68 YN1 C29 H36 SING N N 69 YN1 C29 H37 SING N N 70 YN1 C30 H38 SING N N 71 YN1 C30 H39 SING N N 72 YN1 N07 H40 SING N N 73 YN1 N11 H41 SING N N 74 YN1 N18 H42 SING N N 75 YN1 O02 H43 SING N N 76 YN1 S1 O1 DOUB N N 77 YN1 S1 O2 DOUB N N 78 YN1 S1 O3 SING N N 79 YN1 O3 H2 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YN1 SMILES ACDLabs 12.01 "CC(C)CC(NC(=O)OCC1CCC(CCC)CC1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O" YN1 InChI InChI 1.03 "InChI=1S/C24H43N3O8S/c1-4-5-16-6-8-17(9-7-16)14-35-24(31)27-19(12-15(2)3)22(29)26-20(23(30)36(32,33)34)13-18-10-11-25-21(18)28/h15-20,23,30H,4-14H2,1-3H3,(H,25,28)(H,26,29)(H,27,31)(H,32,33,34)/t16-,17-,18-,19-,20-,23-/m0/s1" YN1 InChIKey InChI 1.03 ZJKUZJJPWZXFHP-LZVKGNEYSA-N YN1 SMILES_CANONICAL CACTVS 3.385 "CCC[C@H]1CC[C@@H](CC1)COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O" YN1 SMILES CACTVS 3.385 "CCC[CH]1CC[CH](CC1)COC(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O" YN1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC1CCC(CC1)COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)C(O)S(=O)(=O)O" YN1 SMILES "OpenEye OEToolkits" 2.0.7 "CCCC1CCC(CC1)COC(=O)NC(CC(C)C)C(=O)NC(CC2CCNC2=O)C(O)S(=O)(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YN1 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1s,4S)-4-propylcyclohexyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid" YN1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-4-methyl-2-[(4-propylcyclohexyl)methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YN1 "Create component" 2021-03-12 RCSB YN1 "Initial release" 2021-03-24 RCSB ##