data_YNE # _chem_comp.id YNE _chem_comp.name "2-(3-piperidin-4-yloxy-1-benzothiophen-2-yl)-5-[(1,3,5-trimethylpyrazol-4-yl)methyl]-1,3,4-oxadiazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H25 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-10-13 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 423.531 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YNE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2YNE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YNE C4 C4 C 0 1 N N N 5.682 -12.032 92.816 -4.463 2.161 -1.105 C4 YNE 1 YNE C3 C3 C 0 1 Y N N 4.200 -11.849 92.895 -4.871 0.987 -0.254 C3 YNE 2 YNE N1 N1 N 0 1 Y N N 3.353 -12.839 93.206 -5.743 1.015 0.776 N1 YNE 3 YNE C2 C2 C 0 1 N N N 3.621 -14.218 93.576 -6.462 2.194 1.265 C2 YNE 4 YNE N N N 0 1 Y N N 2.055 -12.465 93.250 -5.840 -0.283 1.295 N YNE 5 YNE C5 C5 C 0 1 Y N N 3.394 -10.697 92.637 -4.433 -0.287 -0.389 C5 YNE 6 YNE C1 C1 C 0 1 Y N N 1.986 -11.139 92.861 -5.052 -1.061 0.598 C1 YNE 7 YNE C C C 0 1 N N N 0.720 -10.318 92.751 -4.851 -2.539 0.817 C YNE 8 YNE C6 C6 C 0 1 N N N 3.892 -9.358 92.277 -3.450 -0.782 -1.418 C6 YNE 9 YNE C7 C7 C 0 1 Y N N 3.892 -9.311 90.766 -2.051 -0.673 -0.869 C7 YNE 10 YNE O O O 0 1 Y N N 2.707 -9.202 90.057 -1.233 0.389 -0.986 O YNE 11 YNE C8 C8 C 0 1 Y N N 3.197 -9.095 88.794 -0.088 0.057 -0.352 C8 YNE 12 YNE N3 N3 N 0 1 Y N N 4.533 -9.170 88.617 -0.243 -1.163 0.116 N3 YNE 13 YNE N2 N2 N 0 1 Y N N 4.967 -9.303 89.967 -1.418 -1.588 -0.191 N2 YNE 14 YNE C9 C9 C 0 1 Y N N 2.156 -8.954 87.783 1.107 0.900 -0.213 C9 YNE 15 YNE S S S 0 1 Y N N 0.558 -8.371 88.138 1.256 2.522 -0.860 S YNE 16 YNE C21 C21 C 0 1 Y N N -0.013 -8.471 86.541 2.892 2.697 -0.239 C21 YNE 17 YNE C20 C20 C 0 1 Y N N -1.286 -8.212 86.033 3.785 3.770 -0.328 C20 YNE 18 YNE C19 C19 C 0 1 Y N N -1.561 -8.337 84.660 5.033 3.682 0.243 C19 YNE 19 YNE C18 C18 C 0 1 Y N N -0.596 -8.696 83.734 5.415 2.526 0.912 C18 YNE 20 YNE C17 C17 C 0 1 Y N N 0.728 -9.004 84.159 4.563 1.470 1.012 C17 YNE 21 YNE C16 C16 C 0 1 Y N N 1.012 -8.904 85.553 3.274 1.532 0.435 C16 YNE 22 YNE C10 C10 C 0 1 Y N N 2.256 -9.135 86.347 2.222 0.531 0.430 C10 YNE 23 YNE O1 O1 O 0 1 N N N 3.374 -9.566 85.763 2.359 -0.683 1.028 O1 YNE 24 YNE C11 C11 C 0 1 N N N 3.295 -10.729 84.905 2.891 -1.742 0.229 C11 YNE 25 YNE C15 C15 C 0 1 N N N 4.244 -10.590 83.756 3.653 -2.724 1.124 C15 YNE 26 YNE C14 C14 C 0 1 N N N 5.737 -10.571 84.114 4.168 -3.887 0.274 C14 YNE 27 YNE N4 N4 N 0 1 N N N 5.984 -11.805 84.861 3.035 -4.563 -0.371 N4 YNE 28 YNE C13 C13 C 0 1 N N N 5.146 -11.996 86.082 2.316 -3.653 -1.272 C13 YNE 29 YNE C12 C12 C 0 1 N N N 3.630 -11.982 85.732 1.746 -2.483 -0.467 C12 YNE 30 YNE H41C H41C H 0 0 N N N 5.960 -12.338 91.797 -3.593 2.646 -0.662 H41C YNE 31 YNE H42C H42C H 0 0 N N N 6.182 -11.084 93.063 -4.215 1.814 -2.108 H42C YNE 32 YNE H43C H43C H 0 0 N N N 5.994 -12.808 93.530 -5.286 2.874 -1.160 H43C YNE 33 YNE H21C H21C H 0 0 N N N 2.676 -14.719 93.833 -7.412 2.285 0.738 H21C YNE 34 YNE H22C H22C H 0 0 N N N 4.094 -14.739 92.731 -6.648 2.089 2.334 H22C YNE 35 YNE H23C H23C H 0 0 N N N 4.296 -14.240 94.444 -5.861 3.086 1.086 H23C YNE 36 YNE H61C H61C H 0 0 N N N 3.229 -8.580 92.684 -3.667 -1.823 -1.656 H61C YNE 37 YNE H62C H62C H 0 0 N N N 4.911 -9.211 92.665 -3.534 -0.177 -2.321 H62C YNE 38 YNE HC1 HC1 H 0 1 N N N -0.145 -10.938 93.029 -5.573 -3.096 0.221 HC1 YNE 39 YNE HC2 HC2 H 0 1 N N N 0.784 -9.453 93.428 -3.840 -2.816 0.516 HC2 YNE 40 YNE HC3 HC3 H 0 1 N N N 0.601 -9.965 91.716 -4.992 -2.772 1.872 HC3 YNE 41 YNE H20 H20 H 0 1 N N N -2.074 -7.910 86.706 3.494 4.671 -0.848 H20 YNE 42 YNE H19 H19 H 0 1 N N N -2.566 -8.145 84.313 5.718 4.513 0.170 H19 YNE 43 YNE H18 H18 H 0 1 N N N -0.848 -8.743 82.685 6.397 2.466 1.357 H18 YNE 44 YNE H17 H17 H 0 1 N N N 1.488 -9.302 83.452 4.874 0.578 1.535 H17 YNE 45 YNE H11 H11 H 0 1 N N N 2.272 -10.832 84.514 3.568 -1.330 -0.519 H11 YNE 46 YNE H151 H151 H 0 0 N N N 4.072 -11.436 83.074 4.496 -2.213 1.590 H151 YNE 47 YNE H152 H152 H 0 0 N N N 4.010 -9.648 83.239 2.986 -3.105 1.897 H152 YNE 48 YNE H121 H121 H 0 0 N N N 3.041 -11.974 86.661 1.048 -2.861 0.280 H121 YNE 49 YNE H122 H122 H 0 0 N N N 3.382 -12.881 85.149 1.225 -1.799 -1.138 H122 YNE 50 YNE H141 H141 H 0 0 N N N 6.350 -10.547 83.201 4.846 -3.506 -0.490 H141 YNE 51 YNE H142 H142 H 0 0 N N N 5.971 -9.694 84.735 4.699 -4.595 0.910 H142 YNE 52 YNE H4 H4 H 0 1 N N N 5.814 -12.576 84.247 3.339 -5.391 -0.861 H4 YNE 53 YNE H131 H131 H 0 0 N N N 5.399 -12.962 86.543 3.003 -3.273 -2.028 H131 YNE 54 YNE H132 H132 H 0 0 N N N 5.358 -11.184 86.793 1.502 -4.191 -1.758 H132 YNE 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YNE C4 C3 SING N N 1 YNE C3 N1 SING Y N 2 YNE C3 C5 DOUB Y N 3 YNE N1 C2 SING N N 4 YNE N1 N SING Y N 5 YNE N C1 DOUB Y N 6 YNE C5 C1 SING Y N 7 YNE C5 C6 SING N N 8 YNE C1 C SING N N 9 YNE C6 C7 SING N N 10 YNE C7 O SING Y N 11 YNE C7 N2 DOUB Y N 12 YNE O C8 SING Y N 13 YNE C8 N3 DOUB Y N 14 YNE C8 C9 SING N N 15 YNE N3 N2 SING Y N 16 YNE C9 S SING Y N 17 YNE C9 C10 DOUB Y N 18 YNE S C21 SING Y N 19 YNE C21 C20 SING Y N 20 YNE C21 C16 DOUB Y N 21 YNE C20 C19 DOUB Y N 22 YNE C19 C18 SING Y N 23 YNE C18 C17 DOUB Y N 24 YNE C17 C16 SING Y N 25 YNE C16 C10 SING Y N 26 YNE C10 O1 SING N N 27 YNE O1 C11 SING N N 28 YNE C11 C15 SING N N 29 YNE C11 C12 SING N N 30 YNE C15 C14 SING N N 31 YNE C14 N4 SING N N 32 YNE N4 C13 SING N N 33 YNE C13 C12 SING N N 34 YNE C4 H41C SING N N 35 YNE C4 H42C SING N N 36 YNE C4 H43C SING N N 37 YNE C2 H21C SING N N 38 YNE C2 H22C SING N N 39 YNE C2 H23C SING N N 40 YNE C6 H61C SING N N 41 YNE C6 H62C SING N N 42 YNE C HC1 SING N N 43 YNE C HC2 SING N N 44 YNE C HC3 SING N N 45 YNE C20 H20 SING N N 46 YNE C19 H19 SING N N 47 YNE C18 H18 SING N N 48 YNE C17 H17 SING N N 49 YNE C11 H11 SING N N 50 YNE C15 H151 SING N N 51 YNE C15 H152 SING N N 52 YNE C12 H121 SING N N 53 YNE C12 H122 SING N N 54 YNE C14 H141 SING N N 55 YNE C14 H142 SING N N 56 YNE N4 H4 SING N N 57 YNE C13 H131 SING N N 58 YNE C13 H132 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YNE SMILES ACDLabs 12.01 "n1n(c(c(c1C)Cc2nnc(o2)c5sc3ccccc3c5OC4CCNCC4)C)C" YNE InChI InChI 1.03 "InChI=1S/C22H25N5O2S/c1-13-17(14(2)27(3)26-13)12-19-24-25-22(29-19)21-20(28-15-8-10-23-11-9-15)16-6-4-5-7-18(16)30-21/h4-7,15,23H,8-12H2,1-3H3" YNE InChIKey InChI 1.03 XZORQADPEUSNQJ-UHFFFAOYSA-N YNE SMILES_CANONICAL CACTVS 3.385 "Cn1nc(C)c(Cc2oc(nn2)c3sc4ccccc4c3OC5CCNCC5)c1C" YNE SMILES CACTVS 3.385 "Cn1nc(C)c(Cc2oc(nn2)c3sc4ccccc4c3OC5CCNCC5)c1C" YNE SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1c(c(n(n1)C)C)Cc2nnc(o2)c3c(c4ccccc4s3)OC5CCNCC5" YNE SMILES "OpenEye OEToolkits" 1.9.2 "Cc1c(c(n(n1)C)C)Cc2nnc(o2)c3c(c4ccccc4s3)OC5CCNCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YNE "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(2-{5-[(1,3,5-trimethyl-1H-pyrazol-4-yl)methyl]-1,3,4-oxadiazol-2-yl}-1-benzothiophen-3-yl)oxy]piperidine" YNE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-(3-piperidin-4-yloxy-1-benzothiophen-2-yl)-5-[(1,3,5-trimethylpyrazol-4-yl)methyl]-1,3,4-oxadiazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YNE "Create component" 2012-10-13 EBI YNE "Initial release" 2014-01-15 RCSB YNE "Modify descriptor" 2014-09-05 RCSB #