data_ZGJ # _chem_comp.id ZGJ _chem_comp.name "3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7,8,9-tetrahydro-5~{H}-imidazo[1,2-a][1,3]diazepine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H26 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2021-04-20 _chem_comp.pdbx_modified_date 2022-06-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 396.504 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZGJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MJE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZGJ C30 C1 C 0 1 N N N 21.768 42.621 -20.773 3.404 3.669 -1.844 C30 ZGJ 1 ZGJ O29 O1 O 0 1 N N N 20.489 42.001 -20.618 3.066 2.464 -1.155 O29 ZGJ 2 ZGJ C11 C2 C 0 1 Y N N 20.086 40.848 -21.275 4.010 1.939 -0.330 C11 ZGJ 3 ZGJ C10 C3 C 0 1 Y N N 20.984 39.794 -21.517 5.234 2.570 -0.185 C10 ZGJ 4 ZGJ C9 C4 C 0 1 Y N N 20.569 38.637 -22.179 6.194 2.035 0.654 C9 ZGJ 5 ZGJ C8 C5 C 0 1 Y N N 19.253 38.511 -22.595 5.939 0.870 1.355 C8 ZGJ 6 ZGJ C7 C6 C 0 1 Y N N 18.354 39.547 -22.357 4.724 0.230 1.222 C7 ZGJ 7 ZGJ C6 C7 C 0 1 Y N N 18.756 40.705 -21.697 3.746 0.763 0.381 C6 ZGJ 8 ZGJ C5 C8 C 0 1 Y N N 17.709 41.753 -21.492 2.442 0.083 0.235 C5 ZGJ 9 ZGJ C1 C9 C 0 1 Y N N 17.036 42.376 -22.551 1.215 0.661 0.290 C1 ZGJ 10 ZGJ N4 N1 N 0 1 Y N N 17.239 42.224 -20.301 2.235 -1.265 0.009 N4 ZGJ 11 ZGJ C28 C10 C 0 1 N N N 17.745 41.755 -18.998 3.262 -2.299 -0.123 C28 ZGJ 12 ZGJ C27 C11 C 0 1 N N N 17.160 42.378 -17.730 2.724 -3.431 -1.002 C27 ZGJ 13 ZGJ C26 C12 C 0 1 N N N 15.663 42.664 -17.796 1.967 -4.430 -0.128 C26 ZGJ 14 ZGJ C25 C13 C 0 1 N N N 15.419 44.037 -18.398 0.802 -3.727 0.572 C25 ZGJ 15 ZGJ N24 N2 N 0 1 N N N 15.498 43.926 -19.849 0.262 -2.672 -0.296 N24 ZGJ 16 ZGJ C3 C14 C 0 1 Y N N 16.295 43.134 -20.648 0.892 -1.464 -0.067 C3 ZGJ 17 ZGJ N2 N3 N 1 1 Y N N 16.184 43.205 -21.973 0.289 -0.299 0.108 N2 ZGJ 18 ZGJ C12 C15 C 0 1 Y N N 15.338 44.015 -22.639 -1.075 -0.100 0.100 C12 ZGJ 19 ZGJ C17 C16 C 0 1 Y N N 13.946 43.867 -22.543 -1.681 0.612 1.135 C17 ZGJ 20 ZGJ C16 C17 C 0 1 Y N N 13.044 44.692 -23.207 -3.043 0.812 1.128 C16 ZGJ 21 ZGJ C15 C18 C 0 1 Y N N 13.500 45.724 -24.032 -3.817 0.302 0.086 C15 ZGJ 22 ZGJ C14 C19 C 0 1 Y N N 14.883 45.901 -24.141 -3.211 -0.410 -0.949 C14 ZGJ 23 ZGJ C13 C20 C 0 1 Y N N 15.767 45.062 -23.463 -1.848 -0.604 -0.945 C13 ZGJ 24 ZGJ C18 C21 C 0 1 Y N N 12.528 46.636 -24.733 -5.285 0.516 0.078 C18 ZGJ 25 ZGJ C23 C22 C 0 1 Y N N 12.862 47.991 -24.953 -6.061 0.007 -0.962 C23 ZGJ 26 ZGJ C22 C23 C 0 1 Y N N 11.965 48.855 -25.585 -7.426 0.209 -0.963 C22 ZGJ 27 ZGJ C21 C24 C 0 1 Y N N 10.714 48.386 -25.985 -8.024 0.915 0.065 C21 ZGJ 28 ZGJ C20 C25 C 0 1 Y N N 10.358 47.055 -25.758 -7.260 1.422 1.100 C20 ZGJ 29 ZGJ C19 C26 C 0 1 Y N N 11.255 46.183 -25.135 -5.894 1.222 1.114 C19 ZGJ 30 ZGJ H1 H1 H 0 1 N N N 21.821 43.517 -20.138 4.278 3.496 -2.472 H1 ZGJ 31 ZGJ H2 H2 H 0 1 N N N 22.557 41.914 -20.476 2.565 3.979 -2.467 H2 ZGJ 32 ZGJ H3 H3 H 0 1 N N N 21.911 42.908 -21.825 3.626 4.452 -1.119 H3 ZGJ 33 ZGJ H4 H4 H 0 1 N N N 22.009 39.880 -21.186 5.440 3.480 -0.729 H4 ZGJ 34 ZGJ H5 H5 H 0 1 N N N 21.273 37.840 -22.367 7.148 2.530 0.763 H5 ZGJ 35 ZGJ H6 H6 H 0 1 N N N 18.927 37.614 -23.101 6.696 0.456 2.005 H6 ZGJ 36 ZGJ H7 H7 H 0 1 N N N 17.331 39.451 -22.689 4.529 -0.680 1.770 H7 ZGJ 37 ZGJ H8 H8 H 0 1 N N N 17.182 42.214 -23.609 1.016 1.711 0.452 H8 ZGJ 38 ZGJ H9 H9 H 0 1 N N N 17.558 40.672 -18.946 4.153 -1.872 -0.583 H9 ZGJ 39 ZGJ H10 H10 H 0 1 N N N 18.829 41.941 -18.983 3.512 -2.691 0.863 H10 ZGJ 40 ZGJ H11 H11 H 0 1 N N N 17.341 41.687 -16.893 2.048 -3.019 -1.753 H11 ZGJ 41 ZGJ H12 H12 H 0 1 N N N 17.683 43.327 -17.541 3.554 -3.934 -1.497 H12 ZGJ 42 ZGJ H13 H13 H 0 1 N N N 15.242 42.632 -16.780 1.582 -5.238 -0.751 H13 ZGJ 43 ZGJ H14 H14 H 0 1 N N N 15.174 41.901 -18.420 2.644 -4.842 0.621 H14 ZGJ 44 ZGJ H15 H15 H 0 1 N N N 16.183 44.741 -18.038 0.018 -4.453 0.789 H15 ZGJ 45 ZGJ H16 H16 H 0 1 N N N 14.421 44.398 -18.107 1.153 -3.283 1.503 H16 ZGJ 46 ZGJ H17 H17 H 0 1 N N N 14.870 44.523 -20.348 0.328 -2.935 -1.268 H17 ZGJ 47 ZGJ H18 H18 H 0 1 N N N 13.556 43.073 -21.923 -1.082 1.007 1.942 H18 ZGJ 48 ZGJ H19 H19 H 0 1 N N N 11.983 44.534 -23.084 -3.513 1.363 1.929 H19 ZGJ 49 ZGJ H20 H20 H 0 1 N N N 15.271 46.698 -24.758 -3.811 -0.805 -1.756 H20 ZGJ 50 ZGJ H21 H21 H 0 1 N N N 16.828 45.227 -23.579 -1.378 -1.155 -1.747 H21 ZGJ 51 ZGJ H22 H22 H 0 1 N N N 13.823 48.363 -24.629 -5.595 -0.544 -1.765 H22 ZGJ 52 ZGJ H23 H23 H 0 1 N N N 12.240 49.884 -25.764 -8.028 -0.184 -1.769 H23 ZGJ 53 ZGJ H24 H24 H 0 1 N N N 10.019 49.054 -26.472 -9.093 1.074 0.057 H24 ZGJ 54 ZGJ H25 H25 H 0 1 N N N 9.386 46.698 -26.065 -7.732 1.972 1.900 H25 ZGJ 55 ZGJ H26 H26 H 0 1 N N N 10.971 45.156 -24.960 -5.298 1.618 1.923 H26 ZGJ 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZGJ C21 C20 DOUB Y N 1 ZGJ C21 C22 SING Y N 2 ZGJ C20 C19 SING Y N 3 ZGJ C22 C23 DOUB Y N 4 ZGJ C19 C18 DOUB Y N 5 ZGJ C23 C18 SING Y N 6 ZGJ C18 C15 SING N N 7 ZGJ C14 C15 DOUB Y N 8 ZGJ C14 C13 SING Y N 9 ZGJ C15 C16 SING Y N 10 ZGJ C13 C12 DOUB Y N 11 ZGJ C16 C17 DOUB Y N 12 ZGJ C12 C17 SING Y N 13 ZGJ C12 N2 SING N N 14 ZGJ C8 C7 DOUB Y N 15 ZGJ C8 C9 SING Y N 16 ZGJ C1 N2 SING Y N 17 ZGJ C1 C5 DOUB Y N 18 ZGJ C7 C6 SING Y N 19 ZGJ C9 C10 DOUB Y N 20 ZGJ N2 C3 DOUB Y N 21 ZGJ C6 C5 SING N N 22 ZGJ C6 C11 DOUB Y N 23 ZGJ C10 C11 SING Y N 24 ZGJ C5 N4 SING Y N 25 ZGJ C11 O29 SING N N 26 ZGJ C30 O29 SING N N 27 ZGJ C3 N4 SING Y N 28 ZGJ C3 N24 SING N N 29 ZGJ N4 C28 SING N N 30 ZGJ N24 C25 SING N N 31 ZGJ C28 C27 SING N N 32 ZGJ C25 C26 SING N N 33 ZGJ C26 C27 SING N N 34 ZGJ C30 H1 SING N N 35 ZGJ C30 H2 SING N N 36 ZGJ C30 H3 SING N N 37 ZGJ C10 H4 SING N N 38 ZGJ C9 H5 SING N N 39 ZGJ C8 H6 SING N N 40 ZGJ C7 H7 SING N N 41 ZGJ C1 H8 SING N N 42 ZGJ C28 H9 SING N N 43 ZGJ C28 H10 SING N N 44 ZGJ C27 H11 SING N N 45 ZGJ C27 H12 SING N N 46 ZGJ C26 H13 SING N N 47 ZGJ C26 H14 SING N N 48 ZGJ C25 H15 SING N N 49 ZGJ C25 H16 SING N N 50 ZGJ N24 H17 SING N N 51 ZGJ C17 H18 SING N N 52 ZGJ C16 H19 SING N N 53 ZGJ C14 H20 SING N N 54 ZGJ C13 H21 SING N N 55 ZGJ C23 H22 SING N N 56 ZGJ C22 H23 SING N N 57 ZGJ C21 H24 SING N N 58 ZGJ C20 H25 SING N N 59 ZGJ C19 H26 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZGJ SMILES ACDLabs 12.01 "COc1ccccc1c1c[n+](c2NCCCCn21)c1ccc(cc1)c1ccccc1" ZGJ InChI InChI 1.03 "InChI=1S/C26H25N3O/c1-30-25-12-6-5-11-23(25)24-19-29(26-27-17-7-8-18-28(24)26)22-15-13-21(14-16-22)20-9-3-2-4-10-20/h2-6,9-16,19H,7-8,17-18H2,1H3/p+1" ZGJ InChIKey InChI 1.03 HGDBKVRVNGXGJR-UHFFFAOYSA-O ZGJ SMILES_CANONICAL CACTVS 3.385 "COc1ccccc1c2c[n+](c3NCCCCn23)c4ccc(cc4)c5ccccc5" ZGJ SMILES CACTVS 3.385 "COc1ccccc1c2c[n+](c3NCCCCn23)c4ccc(cc4)c5ccccc5" ZGJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccccc1c2c[n+](c3n2CCCCN3)c4ccc(cc4)c5ccccc5" ZGJ SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccccc1c2c[n+](c3n2CCCCN3)c4ccc(cc4)c5ccccc5" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZGJ "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-1-([1,1'-biphenyl]-4-yl)-3-(2-methoxyphenyl)-6,7,8,9-tetrahydro-5H-imidazo[1,2-a][1,3]diazepin-1-ium" ZGJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7,8,9-tetrahydro-5~{H}-imidazo[1,2-a][1,3]diazepin-1-ium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZGJ "Create component" 2021-04-20 RCSB ZGJ "Initial release" 2022-06-08 RCSB ##