data_ZGO # _chem_comp.id ZGO _chem_comp.name "(1R,2S,5S)-N-{(1S)-1-cyano-2-[(3S)-2-oxopyrrolidin-3-yl]ethyl}-6,6-dimethyl-3-[3-methyl-N-({1-[(2-methylpropane-2-sulfonyl)methyl]cyclohexyl}carbamoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H54 N6 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-09 _chem_comp.pdbx_modified_date 2023-07-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 662.883 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZGO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GFR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZGO C10 C1 C 0 1 N N N 7.104 -0.926 18.745 2.173 3.931 0.420 C10 ZGO 1 ZGO C11 C2 C 0 1 N N N 6.141 0.221 19.002 2.506 5.424 0.404 C11 ZGO 2 ZGO C12 C3 C 0 1 N N N 6.537 -1.969 17.799 0.988 3.511 -0.451 C12 ZGO 3 ZGO C13 C4 C 0 1 N N N 6.262 -7.743 17.928 -5.127 0.816 -1.097 C13 ZGO 4 ZGO C14 C5 C 0 1 N N N 5.310 -6.537 17.697 -5.135 2.338 -0.941 C14 ZGO 5 ZGO C15 C6 C 0 1 N N N 5.476 -5.903 16.314 -4.547 2.984 -2.198 C15 ZGO 6 ZGO C16 C7 C 0 1 N N N 5.271 -6.937 15.199 -5.389 2.591 -3.413 C16 ZGO 7 ZGO C18 C8 C 0 1 N N N 6.074 -8.756 16.771 -5.969 0.424 -2.313 C18 ZGO 8 ZGO C20 C9 C 0 1 N N N 6.444 -10.095 21.594 -6.429 -2.176 1.546 C20 ZGO 9 ZGO C21 C10 C 0 1 N N N 6.725 -11.546 21.998 -7.837 -1.594 1.686 C21 ZGO 10 ZGO C22 C11 C 0 1 N N N 5.044 -9.646 22.013 -5.557 -1.687 2.704 C22 ZGO 11 ZGO C23 C12 C 0 1 N N N 7.510 -9.149 22.148 -6.503 -3.704 1.573 C23 ZGO 12 ZGO C24 C13 C 0 1 N N N 14.864 -2.825 17.605 6.321 -2.939 -0.734 C24 ZGO 13 ZGO C25 C14 C 0 1 N N N 15.707 -4.062 17.253 6.655 -3.867 -1.922 C25 ZGO 14 ZGO C26 C15 C 0 1 N N N 13.760 -1.116 15.971 7.437 -0.761 -0.103 C26 ZGO 15 ZGO C30 C16 C 0 1 N N N 12.394 -6.237 18.696 0.372 -0.632 2.681 C30 ZGO 16 ZGO C31 C17 C 0 1 N N S 14.005 -2.574 16.350 6.827 -1.571 -1.248 C31 ZGO 17 ZGO C32 C18 C 0 1 N N N 10.998 -0.829 18.280 4.116 0.578 0.774 C32 ZGO 18 ZGO C33 C19 C 0 1 N N S 9.606 -1.450 18.080 3.106 1.484 0.118 C33 ZGO 19 ZGO C1 C20 C 0 1 N N S 13.086 -0.329 17.110 6.344 -0.401 0.905 C1 ZGO 20 ZGO C17 C21 C 0 1 N N N 6.216 -8.125 15.377 -5.381 1.069 -3.570 C17 ZGO 21 ZGO C19 C22 C 0 1 N N N 5.848 -8.358 19.294 -5.714 0.171 0.159 C19 ZGO 22 ZGO C2 C23 C 0 1 N N N 8.595 -2.688 19.962 1.657 1.827 1.922 C2 ZGO 23 ZGO C27 C24 C 0 1 N N N 14.734 -3.332 15.244 7.888 -1.928 -2.267 C27 ZGO 24 ZGO C28 C25 C 0 1 N N N 11.369 -6.635 20.947 -0.214 -2.142 0.779 C28 ZGO 25 ZGO C29 C26 C 0 1 N N N 12.390 -4.406 20.410 -2.024 -1.038 2.102 C29 ZGO 26 ZGO C3 C27 C 0 1 N N S 7.980 -1.306 19.921 2.384 3.175 1.734 C3 ZGO 27 ZGO C4 C28 C 0 1 N N R 8.576 -0.548 18.756 3.340 2.949 0.544 C4 ZGO 28 ZGO C5 C29 C 0 1 N N N 10.314 -3.757 18.441 0.791 0.445 -0.028 C5 ZGO 29 ZGO C6 C30 C 0 1 N N S 10.232 -5.062 19.248 -0.583 0.321 0.579 C6 ZGO 30 ZGO C7 C31 C 0 1 N N N 11.589 -5.590 19.839 -0.612 -0.873 1.535 C7 ZGO 31 ZGO C8 C32 C 0 1 N N N 8.238 -6.410 18.769 -2.815 0.618 -0.353 C8 ZGO 32 ZGO C9 C33 C 0 1 N N N 13.464 1.092 17.064 6.947 0.290 2.057 C9 ZGO 33 ZGO N34 N1 N 0 1 N N N 9.518 -6.043 18.449 -1.570 0.119 -0.485 N34 ZGO 34 ZGO N35 N2 N 0 1 N N N 7.670 -7.312 17.907 -3.750 0.352 -1.287 N35 ZGO 35 ZGO N36 N3 N 0 1 N N N 11.641 -0.477 17.144 5.362 0.479 0.268 N36 ZGO 36 ZGO N37 N4 N 0 1 N N N 15.776 -3.980 15.799 7.771 -3.221 -2.622 N37 ZGO 37 ZGO N38 N5 N 0 1 N N N 13.767 2.211 17.051 7.412 0.822 2.946 N38 ZGO 38 ZGO N39 N6 N 0 1 N N N 9.523 -2.725 18.808 1.741 1.168 0.598 N39 ZGO 39 ZGO O40 O1 O 0 1 N N N 11.055 -3.678 17.438 1.041 -0.105 -1.079 O40 ZGO 40 ZGO O41 O2 O 0 1 N N N 7.664 -5.949 19.779 -3.094 1.309 0.608 O41 ZGO 41 ZGO O42 O3 O 0 1 N N N 8.042 -9.905 19.395 -4.355 -2.076 -0.080 O42 ZGO 42 ZGO O43 O4 O 0 1 N N N 5.804 -11.067 19.132 -6.592 -1.985 -1.079 O43 ZGO 43 ZGO O44 O5 O 0 1 N N N 14.407 -3.367 14.056 8.721 -1.161 -2.701 O44 ZGO 44 ZGO O45 O6 O 0 1 N N N 11.500 -0.703 19.399 3.809 -0.062 1.757 O45 ZGO 45 ZGO S46 S1 S 0 1 N N N 6.594 -9.955 19.736 -5.704 -1.633 -0.026 S46 ZGO 46 ZGO H1 H1 H 0 1 N N N 6.604 0.942 19.691 3.158 5.642 -0.442 H1 ZGO 47 ZGO H2 H2 H 0 1 N N N 5.906 0.722 18.051 1.586 6.001 0.312 H2 ZGO 48 ZGO H3 H3 H 0 1 N N N 5.215 -0.171 19.449 3.013 5.693 1.331 H3 ZGO 49 ZGO H4 H4 H 0 1 N N N 5.456 -2.073 17.973 0.552 2.594 -0.055 H4 ZGO 50 ZGO H5 H5 H 0 1 N N N 6.713 -1.655 16.759 0.236 4.301 -0.448 H5 ZGO 51 ZGO H6 H6 H 0 1 N N N 7.032 -2.935 17.979 1.329 3.339 -1.472 H6 ZGO 52 ZGO H7 H7 H 0 1 N N N 5.519 -5.773 18.461 -6.159 2.684 -0.800 H7 ZGO 53 ZGO H8 H8 H 0 1 N N N 4.272 -6.885 17.801 -4.535 2.618 -0.075 H8 ZGO 54 ZGO H9 H9 H 0 1 N N N 6.489 -5.483 16.232 -4.553 4.068 -2.086 H9 ZGO 55 ZGO H10 H10 H 0 1 N N N 4.735 -5.098 16.197 -3.523 2.638 -2.338 H10 ZGO 56 ZGO H11 H11 H 0 1 N N N 5.468 -6.462 14.227 -6.414 2.937 -3.273 H11 ZGO 57 ZGO H12 H12 H 0 1 N N N 4.232 -7.296 15.227 -4.971 3.051 -4.309 H12 ZGO 58 ZGO H13 H13 H 0 1 N N N 5.069 -9.197 16.853 -5.963 -0.660 -2.425 H13 ZGO 59 ZGO H14 H14 H 0 1 N N N 6.831 -9.547 16.874 -6.993 0.770 -2.172 H14 ZGO 60 ZGO H15 H15 H 0 1 N N N 6.641 -11.646 23.090 -7.784 -0.506 1.667 H15 ZGO 61 ZGO H16 H16 H 0 1 N N N 5.995 -12.210 21.512 -8.458 -1.943 0.861 H16 ZGO 62 ZGO H17 H17 H 0 1 N N N 7.741 -11.824 21.682 -8.272 -1.920 2.631 H17 ZGO 63 ZGO H18 H18 H 0 1 N N N 4.945 -9.725 23.106 -5.992 -2.013 3.649 H18 ZGO 64 ZGO H19 H19 H 0 1 N N N 4.886 -8.602 21.705 -4.554 -2.101 2.604 H19 ZGO 65 ZGO H20 H20 H 0 1 N N N 4.293 -10.288 21.530 -5.504 -0.598 2.685 H20 ZGO 66 ZGO H21 H21 H 0 1 N N N 7.487 -9.173 23.247 -7.124 -4.052 0.748 H21 ZGO 67 ZGO H22 H22 H 0 1 N N N 8.502 -9.468 21.795 -5.499 -4.118 1.473 H22 ZGO 68 ZGO H23 H23 H 0 1 N N N 7.308 -8.125 21.800 -6.938 -4.030 2.518 H23 ZGO 69 ZGO H24 H24 H 0 1 N N N 15.511 -1.960 17.813 5.247 -2.912 -0.549 H24 ZGO 70 ZGO H25 H25 H 0 1 N N N 14.227 -3.025 18.479 6.861 -3.243 0.163 H25 ZGO 71 ZGO H26 H26 H 0 1 N N N 15.211 -4.989 17.578 6.956 -4.850 -1.559 H26 ZGO 72 ZGO H27 H27 H 0 1 N N N 16.709 -4.004 17.704 5.794 -3.957 -2.584 H27 ZGO 73 ZGO H28 H28 H 0 1 N N N 14.725 -0.643 15.735 8.207 -1.352 0.392 H28 ZGO 74 ZGO H29 H29 H 0 1 N N N 13.110 -1.084 15.084 7.880 0.153 -0.500 H29 ZGO 75 ZGO H30 H30 H 0 1 N N N 13.350 -6.614 19.088 0.137 0.314 3.170 H30 ZGO 76 ZGO H31 H31 H 0 1 N N N 11.818 -7.071 18.269 0.293 -1.443 3.405 H31 ZGO 77 ZGO H32 H32 H 0 1 N N N 12.589 -5.487 17.915 1.387 -0.595 2.287 H32 ZGO 78 ZGO H33 H33 H 0 1 N N N 13.028 -3.055 16.507 6.016 -1.016 -1.718 H33 ZGO 79 ZGO H34 H34 H 0 1 N N N 9.381 -1.573 17.010 3.161 1.390 -0.967 H34 ZGO 80 ZGO H35 H35 H 0 1 N N N 13.482 -0.741 18.050 5.850 -1.311 1.245 H35 ZGO 81 ZGO H36 H36 H 0 1 N N N 5.983 -8.884 14.616 -5.981 0.790 -4.436 H36 ZGO 82 ZGO H37 H37 H 0 1 N N N 7.252 -7.780 15.245 -4.357 0.724 -3.711 H37 ZGO 83 ZGO H38 H38 H 0 1 N N N 6.118 -7.636 20.079 -5.114 0.451 1.026 H38 ZGO 84 ZGO H39 H39 H 0 1 N N N 4.756 -8.493 19.280 -6.738 0.516 0.300 H39 ZGO 85 ZGO H40 H40 H 0 1 N N N 7.819 -3.461 19.860 2.161 1.225 2.679 H40 ZGO 86 ZGO H41 H41 H 0 1 N N N 9.142 -2.841 20.904 0.616 1.992 2.201 H41 ZGO 87 ZGO H42 H42 H 0 1 N N N 10.795 -6.183 21.769 -0.235 -2.992 1.461 H42 ZGO 88 ZGO H43 H43 H 0 1 N N N 10.812 -7.491 20.538 -0.916 -2.314 -0.037 H43 ZGO 89 ZGO H44 H44 H 0 1 N N N 12.343 -6.978 21.326 0.791 -2.024 0.376 H44 ZGO 90 ZGO H45 H45 H 0 1 N N N 11.822 -3.938 21.227 -2.344 -0.102 2.559 H45 ZGO 91 ZGO H46 H46 H 0 1 N N N 13.355 -4.768 20.795 -2.710 -1.303 1.297 H46 ZGO 92 ZGO H47 H47 H 0 1 N N N 12.566 -3.666 19.616 -2.024 -1.828 2.853 H47 ZGO 93 ZGO H48 H48 H 0 1 N N N 7.836 -0.772 20.872 2.669 3.725 2.630 H48 ZGO 94 ZGO H49 H49 H 0 1 N N N 8.837 0.510 18.904 4.363 3.325 0.522 H49 ZGO 95 ZGO H50 H50 H 0 1 N N N 9.598 -4.838 20.119 -0.822 1.232 1.127 H50 ZGO 96 ZGO H51 H51 H 0 1 N N N 9.967 -6.455 17.656 -1.328 -0.375 -1.284 H51 ZGO 97 ZGO H52 H52 H 0 1 N N N 8.261 -7.710 17.206 -3.511 -0.146 -2.084 H52 ZGO 98 ZGO H53 H53 H 0 1 N N N 11.112 -0.315 16.311 5.608 0.991 -0.519 H53 ZGO 99 ZGO H54 H54 H 0 1 N N N 16.526 -4.368 15.264 8.350 -3.668 -3.259 H54 ZGO 100 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZGO O44 C27 DOUB N N 1 ZGO C16 C17 SING N N 2 ZGO C16 C15 SING N N 3 ZGO C27 N37 SING N N 4 ZGO C27 C31 SING N N 5 ZGO C17 C18 SING N N 6 ZGO N37 C25 SING N N 7 ZGO C26 C31 SING N N 8 ZGO C26 C1 SING N N 9 ZGO C15 C14 SING N N 10 ZGO C31 C24 SING N N 11 ZGO C18 C13 SING N N 12 ZGO N38 C9 TRIP N N 13 ZGO C9 C1 SING N N 14 ZGO C1 N36 SING N N 15 ZGO N36 C32 SING N N 16 ZGO C25 C24 SING N N 17 ZGO O40 C5 DOUB N N 18 ZGO C14 C13 SING N N 19 ZGO C12 C10 SING N N 20 ZGO N35 C13 SING N N 21 ZGO N35 C8 SING N N 22 ZGO C13 C19 SING N N 23 ZGO C33 C32 SING N N 24 ZGO C33 C4 SING N N 25 ZGO C33 N39 SING N N 26 ZGO C32 O45 DOUB N N 27 ZGO C5 N39 SING N N 28 ZGO C5 C6 SING N N 29 ZGO N34 C8 SING N N 30 ZGO N34 C6 SING N N 31 ZGO C30 C7 SING N N 32 ZGO C10 C4 SING N N 33 ZGO C10 C11 SING N N 34 ZGO C10 C3 SING N N 35 ZGO C4 C3 SING N N 36 ZGO C8 O41 DOUB N N 37 ZGO N39 C2 SING N N 38 ZGO O43 S46 DOUB N N 39 ZGO C6 C7 SING N N 40 ZGO C19 S46 SING N N 41 ZGO O42 S46 DOUB N N 42 ZGO S46 C20 SING N N 43 ZGO C7 C29 SING N N 44 ZGO C7 C28 SING N N 45 ZGO C3 C2 SING N N 46 ZGO C20 C21 SING N N 47 ZGO C20 C22 SING N N 48 ZGO C20 C23 SING N N 49 ZGO C11 H1 SING N N 50 ZGO C11 H2 SING N N 51 ZGO C11 H3 SING N N 52 ZGO C12 H4 SING N N 53 ZGO C12 H5 SING N N 54 ZGO C12 H6 SING N N 55 ZGO C14 H7 SING N N 56 ZGO C14 H8 SING N N 57 ZGO C15 H9 SING N N 58 ZGO C15 H10 SING N N 59 ZGO C16 H11 SING N N 60 ZGO C16 H12 SING N N 61 ZGO C18 H13 SING N N 62 ZGO C18 H14 SING N N 63 ZGO C21 H15 SING N N 64 ZGO C21 H16 SING N N 65 ZGO C21 H17 SING N N 66 ZGO C22 H18 SING N N 67 ZGO C22 H19 SING N N 68 ZGO C22 H20 SING N N 69 ZGO C23 H21 SING N N 70 ZGO C23 H22 SING N N 71 ZGO C23 H23 SING N N 72 ZGO C24 H24 SING N N 73 ZGO C24 H25 SING N N 74 ZGO C25 H26 SING N N 75 ZGO C25 H27 SING N N 76 ZGO C26 H28 SING N N 77 ZGO C26 H29 SING N N 78 ZGO C30 H30 SING N N 79 ZGO C30 H31 SING N N 80 ZGO C30 H32 SING N N 81 ZGO C31 H33 SING N N 82 ZGO C33 H34 SING N N 83 ZGO C1 H35 SING N N 84 ZGO C17 H36 SING N N 85 ZGO C17 H37 SING N N 86 ZGO C19 H38 SING N N 87 ZGO C19 H39 SING N N 88 ZGO C2 H40 SING N N 89 ZGO C2 H41 SING N N 90 ZGO C28 H42 SING N N 91 ZGO C28 H43 SING N N 92 ZGO C28 H44 SING N N 93 ZGO C29 H45 SING N N 94 ZGO C29 H46 SING N N 95 ZGO C29 H47 SING N N 96 ZGO C3 H48 SING N N 97 ZGO C4 H49 SING N N 98 ZGO C6 H50 SING N N 99 ZGO N34 H51 SING N N 100 ZGO N35 H52 SING N N 101 ZGO N36 H53 SING N N 102 ZGO N37 H54 SING N N 103 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZGO SMILES ACDLabs 12.01 "CC1(C)C2C(C(=O)NC(C#N)CC3CCNC3=O)N(CC21)C(=O)C(NC(=O)NC1(CS(=O)(=O)C(C)(C)C)CCCCC1)C(C)(C)C" ZGO InChI InChI 1.06 "InChI=1S/C33H54N6O6S/c1-30(2,3)25(37-29(43)38-33(13-10-9-11-14-33)19-46(44,45)31(4,5)6)28(42)39-18-22-23(32(22,7)8)24(39)27(41)36-21(17-34)16-20-12-15-35-26(20)40/h20-25H,9-16,18-19H2,1-8H3,(H,35,40)(H,36,41)(H2,37,38,43)/t20-,21-,22-,23-,24-,25+/m0/s1" ZGO InChIKey InChI 1.06 BSSSIUKIEUQFQH-QXMOZHRRSA-N ZGO SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)[C@H](NC(=O)NC1(CCCCC1)C[S](=O)(=O)C(C)(C)C)C(=O)N2C[C@H]3[C@@H]([C@H]2C(=O)N[C@@H](C[C@@H]4CCNC4=O)C#N)C3(C)C" ZGO SMILES CACTVS 3.385 "CC(C)(C)[CH](NC(=O)NC1(CCCCC1)C[S](=O)(=O)C(C)(C)C)C(=O)N2C[CH]3[CH]([CH]2C(=O)N[CH](C[CH]4CCNC4=O)C#N)C3(C)C" ZGO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)[C@H](C(C)(C)C)NC(=O)NC3(CCCCC3)CS(=O)(=O)C(C)(C)C)C(=O)N[C@@H](C[C@@H]4CCNC4=O)C#N)C" ZGO SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)NC3(CCCCC3)CS(=O)(=O)C(C)(C)C)C(=O)NC(CC4CCNC4=O)C#N)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZGO "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,5S)-N-{(1S)-1-cyano-2-[(3S)-2-oxopyrrolidin-3-yl]ethyl}-6,6-dimethyl-3-[3-methyl-N-({1-[(2-methylpropane-2-sulfonyl)methyl]cyclohexyl}carbamoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" ZGO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-3-[(2~{S})-2-[[1-(~{tert}-butylsulfonylmethyl)cyclohexyl]carbamoylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]ethyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZGO "Create component" 2023-03-09 RCSB ZGO "Initial release" 2023-07-12 RCSB #