data_ZHO # _chem_comp.id ZHO _chem_comp.name "~{N},3-dimethyl-6-[6-(4-methylpiperazin-1-yl)-1-(phenylmethyl)benzimidazol-2-yl]-[1,2,4]triazolo[4,3-a]pyrazin-8-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-23 _chem_comp.pdbx_modified_date 2023-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 467.569 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZHO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PIQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZHO N3 N1 N 0 1 Y N N 7.831 9.104 -1.993 -2.957 -0.437 -0.706 N3 ZHO 1 ZHO C4 C1 C 0 1 Y N N 8.970 8.609 -1.621 -4.248 -0.693 -0.766 C4 ZHO 2 ZHO C7 C2 C 0 1 Y N N 9.686 7.661 -2.415 -5.193 0.308 -0.276 C7 ZHO 3 ZHO C10 C3 C 0 1 Y N N 9.935 6.335 -4.112 -5.772 2.212 0.605 C10 ZHO 4 ZHO C17 C4 C 0 1 N N N -0.282 13.968 -3.547 6.541 -0.940 -0.171 C17 ZHO 5 ZHO C20 C5 C 0 1 Y N N 4.096 10.342 -3.716 1.141 0.687 -0.374 C20 ZHO 6 ZHO C21 C6 C 0 1 Y N N 4.400 9.758 -4.945 0.872 1.941 0.203 C21 ZHO 7 ZHO C22 C7 C 0 1 Y N N 3.515 9.907 -6.012 1.934 2.788 0.539 C22 ZHO 8 ZHO C24 C8 C 0 1 Y N N 2.094 11.257 -4.576 3.490 1.151 -0.263 C24 ZHO 9 ZHO C28 C9 C 0 1 Y N N 4.783 9.073 -0.662 -0.347 -2.269 -0.100 C28 ZHO 10 ZHO C1 C10 C 0 1 Y N N 7.949 7.850 -4.084 -3.346 1.684 0.264 C1 ZHO 11 ZHO C2 C11 C 0 1 Y N N 7.325 8.724 -3.227 -2.502 0.726 -0.202 C2 ZHO 12 ZHO N5 N2 N 0 1 N N N 9.470 8.895 -0.398 -4.703 -1.893 -1.287 N5 ZHO 13 ZHO N6 N3 N 0 1 Y N N 9.104 7.289 -3.636 -4.697 1.487 0.233 N6 ZHO 14 ZHO N8 N4 N 0 1 Y N N 10.797 6.957 -2.204 -6.505 0.375 -0.190 N8 ZHO 15 ZHO N9 N5 N 0 1 Y N N 10.964 6.134 -3.280 -6.841 1.504 0.332 N9 ZHO 16 ZHO C11 C12 C 0 1 N N N 9.720 5.656 -5.410 -5.748 3.586 1.223 C11 ZHO 17 ZHO C12 C13 C 0 1 N N N 8.769 9.766 0.520 -3.747 -2.889 -1.776 C12 ZHO 18 ZHO N13 N6 N 0 1 Y N N 5.603 9.106 -4.906 -0.475 2.052 0.309 N13 ZHO 19 ZHO C14 C14 C 0 1 N N N -0.304 11.476 -4.911 5.751 1.810 -0.062 C14 ZHO 20 ZHO N15 N7 N 0 1 N N N 0.964 12.098 -4.522 4.814 0.764 -0.494 N15 ZHO 21 ZHO C16 C15 C 0 1 N N N 0.752 12.898 -3.299 5.112 -0.513 0.170 C16 ZHO 22 ZHO N18 N8 N 0 1 N N N -1.538 13.391 -4.034 7.479 0.106 0.261 N18 ZHO 23 ZHO C19 C16 C 0 1 N N N -1.305 12.552 -5.215 7.181 1.383 -0.403 C19 ZHO 24 ZHO C23 C17 C 0 1 Y N N 2.412 10.698 -5.828 3.220 2.394 0.308 C23 ZHO 25 ZHO C25 C18 C 0 1 Y N N 2.942 11.093 -3.514 2.453 0.298 -0.604 C25 ZHO 26 ZHO N26 N9 N 0 1 Y N N 5.178 10.045 -2.906 -0.086 0.093 -0.595 N26 ZHO 27 ZHO C27 C19 C 0 1 N N N 5.202 10.299 -1.442 -0.319 -1.227 -1.189 C27 ZHO 28 ZHO C29 C20 C 0 1 Y N N 4.467 7.856 -1.197 0.823 -2.898 0.284 C29 ZHO 29 ZHO C30 C21 C 0 1 Y N N 4.094 6.749 -0.406 0.798 -3.850 1.286 C30 ZHO 30 ZHO C31 C22 C 0 1 Y N N 4.049 6.843 0.951 -0.396 -4.172 1.904 C31 ZHO 31 ZHO C32 C23 C 0 1 Y N N 4.356 8.026 1.502 -1.565 -3.543 1.520 C32 ZHO 32 ZHO C33 C24 C 0 1 Y N N 4.690 9.156 0.729 -1.540 -2.592 0.517 C33 ZHO 33 ZHO C34 C25 C 0 1 Y N N 6.055 9.301 -3.636 -1.045 0.967 -0.155 C34 ZHO 34 ZHO C35 C26 C 0 1 N N N -2.517 14.464 -4.327 8.870 -0.301 0.019 C35 ZHO 35 ZHO H49 H1 H 0 1 N N N 0.104 14.672 -4.299 6.775 -1.872 0.344 H49 ZHO 36 ZHO H48 H2 H 0 1 N N N -0.475 14.505 -2.606 6.630 -1.087 -1.247 H48 ZHO 37 ZHO H52 H3 H 0 1 N N N 3.694 9.413 -6.956 1.736 3.753 0.982 H52 ZHO 38 ZHO H36 H4 H 0 1 N N N 7.545 7.621 -5.059 -2.947 2.605 0.662 H36 ZHO 39 ZHO H37 H5 H 0 1 N N N 9.582 8.020 0.073 -5.655 -2.075 -1.328 H37 ZHO 40 ZHO H40 H6 H 0 1 N N N 10.543 4.950 -5.596 -5.783 4.339 0.435 H40 ZHO 41 ZHO H38 H7 H 0 1 N N N 8.766 5.109 -5.384 -6.612 3.705 1.877 H38 ZHO 42 ZHO H39 H8 H 0 1 N N N 9.691 6.405 -6.215 -4.833 3.708 1.802 H39 ZHO 43 ZHO H41 H9 H 0 1 N N N 9.348 9.862 1.450 -4.287 -3.761 -2.145 H41 ZHO 44 ZHO H43 H10 H 0 1 N N N 8.645 10.758 0.061 -3.155 -2.459 -2.584 H43 ZHO 45 ZHO H42 H11 H 0 1 N N N 7.780 9.340 0.746 -3.086 -3.189 -0.962 H42 ZHO 46 ZHO H45 H12 H 0 1 N N N -0.675 10.850 -4.087 5.518 2.742 -0.577 H45 ZHO 47 ZHO H44 H13 H 0 1 N N N -0.150 10.853 -5.804 5.662 1.957 1.014 H44 ZHO 48 ZHO H46 H14 H 0 1 N N N 0.405 12.239 -2.490 4.412 -1.274 -0.175 H46 ZHO 49 ZHO H47 H15 H 0 1 N N N 1.701 13.371 -3.006 5.016 -0.393 1.249 H47 ZHO 50 ZHO H50 H17 H 0 1 N N N -0.924 13.179 -6.034 7.277 1.263 -1.482 H50 ZHO 51 ZHO H51 H18 H 0 1 N N N -2.254 12.087 -5.521 7.880 2.144 -0.058 H51 ZHO 52 ZHO H53 H19 H 0 1 N N N 1.766 10.899 -6.670 4.036 3.051 0.569 H53 ZHO 53 ZHO H54 H20 H 0 1 N N N 2.723 11.532 -2.552 2.665 -0.662 -1.050 H54 ZHO 54 ZHO H55 H21 H 0 1 N N N 6.223 10.581 -1.144 0.483 -1.456 -1.891 H55 ZHO 55 ZHO H56 H22 H 0 1 N N N 4.512 11.124 -1.211 -1.273 -1.225 -1.715 H56 ZHO 56 ZHO H57 H23 H 0 1 N N N 4.504 7.737 -2.270 1.755 -2.646 -0.199 H57 ZHO 57 ZHO H58 H24 H 0 1 N N N 3.841 5.814 -0.884 1.712 -4.342 1.586 H58 ZHO 58 ZHO H59 H25 H 0 1 N N N 3.776 5.995 1.562 -0.415 -4.917 2.687 H59 ZHO 59 ZHO H60 H26 H 0 1 N N N 4.347 8.116 2.578 -2.497 -3.794 2.003 H60 ZHO 60 ZHO H61 H27 H 0 1 N N N 4.877 10.100 1.219 -2.453 -2.097 0.220 H61 ZHO 61 ZHO H63 H28 H 0 1 N N N -2.672 15.076 -3.426 9.015 -0.483 -1.046 H63 ZHO 62 ZHO H64 H29 H 0 1 N N N -2.133 15.099 -5.139 9.542 0.491 0.347 H64 ZHO 63 ZHO H62 H30 H 0 1 N N N -3.473 14.014 -4.633 9.083 -1.213 0.576 H62 ZHO 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZHO C22 C23 DOUB Y N 1 ZHO C22 C21 SING Y N 2 ZHO C23 C24 SING Y N 3 ZHO C11 C10 SING N N 4 ZHO C19 C14 SING N N 5 ZHO C19 N18 SING N N 6 ZHO C21 N13 SING Y N 7 ZHO C21 C20 DOUB Y N 8 ZHO C14 N15 SING N N 9 ZHO N13 C34 DOUB Y N 10 ZHO C24 N15 SING N N 11 ZHO C24 C25 DOUB Y N 12 ZHO N15 C16 SING N N 13 ZHO C35 N18 SING N N 14 ZHO C10 N6 SING Y N 15 ZHO C10 N9 DOUB Y N 16 ZHO C1 N6 SING Y N 17 ZHO C1 C2 DOUB Y N 18 ZHO N18 C17 SING N N 19 ZHO C20 C25 SING Y N 20 ZHO C20 N26 SING Y N 21 ZHO N6 C7 SING Y N 22 ZHO C34 C2 SING N N 23 ZHO C34 N26 SING Y N 24 ZHO C17 C16 SING N N 25 ZHO N9 N8 SING Y N 26 ZHO C2 N3 SING Y N 27 ZHO N26 C27 SING N N 28 ZHO C7 N8 DOUB Y N 29 ZHO C7 C4 SING Y N 30 ZHO N3 C4 DOUB Y N 31 ZHO C4 N5 SING N N 32 ZHO C27 C28 SING N N 33 ZHO C29 C28 DOUB Y N 34 ZHO C29 C30 SING Y N 35 ZHO C28 C33 SING Y N 36 ZHO C30 C31 DOUB Y N 37 ZHO N5 C12 SING N N 38 ZHO C33 C32 DOUB Y N 39 ZHO C31 C32 SING Y N 40 ZHO C17 H49 SING N N 41 ZHO C17 H48 SING N N 42 ZHO C22 H52 SING N N 43 ZHO C1 H36 SING N N 44 ZHO N5 H37 SING N N 45 ZHO C11 H40 SING N N 46 ZHO C11 H38 SING N N 47 ZHO C11 H39 SING N N 48 ZHO C12 H41 SING N N 49 ZHO C12 H43 SING N N 50 ZHO C12 H42 SING N N 51 ZHO C14 H45 SING N N 52 ZHO C14 H44 SING N N 53 ZHO C16 H46 SING N N 54 ZHO C16 H47 SING N N 55 ZHO C19 H50 SING N N 56 ZHO C19 H51 SING N N 57 ZHO C23 H53 SING N N 58 ZHO C25 H54 SING N N 59 ZHO C27 H55 SING N N 60 ZHO C27 H56 SING N N 61 ZHO C29 H57 SING N N 62 ZHO C30 H58 SING N N 63 ZHO C31 H59 SING N N 64 ZHO C32 H60 SING N N 65 ZHO C33 H61 SING N N 66 ZHO C35 H63 SING N N 67 ZHO C35 H64 SING N N 68 ZHO C35 H62 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZHO InChI InChI 1.06 "InChI=1S/C26H29N9/c1-18-30-31-26-24(27-2)28-22(17-34(18)26)25-29-21-10-9-20(33-13-11-32(3)12-14-33)15-23(21)35(25)16-19-7-5-4-6-8-19/h4-10,15,17H,11-14,16H2,1-3H3,(H,27,28)" ZHO InChIKey InChI 1.06 JLUUVUUYIXBDCG-UHFFFAOYSA-N ZHO SMILES_CANONICAL CACTVS 3.385 "CNc1nc(cn2c(C)nnc12)c3nc4ccc(cc4n3Cc5ccccc5)N6CCN(C)CC6" ZHO SMILES CACTVS 3.385 "CNc1nc(cn2c(C)nnc12)c3nc4ccc(cc4n3Cc5ccccc5)N6CCN(C)CC6" ZHO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nnc2n1cc(nc2NC)c3nc4ccc(cc4n3Cc5ccccc5)N6CCN(CC6)C" ZHO SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nnc2n1cc(nc2NC)c3nc4ccc(cc4n3Cc5ccccc5)N6CCN(CC6)C" # _pdbx_chem_comp_identifier.comp_id ZHO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N},3-dimethyl-6-[6-(4-methylpiperazin-1-yl)-1-(phenylmethyl)benzimidazol-2-yl]-[1,2,4]triazolo[4,3-a]pyrazin-8-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZHO "Create component" 2023-06-23 PDBE ZHO "Initial release" 2023-07-26 RCSB #