data_ZJU # _chem_comp.id ZJU _chem_comp.name "N-SUCCINYL-ASPARTIC ACID" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H11 N O7" _chem_comp.mon_nstd_parent_comp_id ASP _chem_comp.pdbx_synonyms "2-[(4-oxidanyl-4-oxidanylidene-butanoyl)amino]butanedioic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-22 _chem_comp.pdbx_modified_date 2024-04-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 233.175 _chem_comp.one_letter_code D _chem_comp.three_letter_code ZJU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZJU O1 O1 O 0 1 N N N N N N 5.068 1.015 -0.816 5.504 -0.055 -0.529 O1 ZJU 1 ZJU C1 C1 C 0 1 N N N N N N 4.451 1.034 0.337 4.345 -0.273 0.111 C1 ZJU 2 ZJU O2 O2 O 0 1 N N N N N N 5.008 0.791 1.391 4.343 -0.821 1.188 O2 ZJU 3 ZJU C2 C2 C 0 1 N N N N N N 2.995 1.385 0.225 3.045 0.167 -0.513 C2 ZJU 4 ZJU C3 C3 C 0 1 N N N N N N 2.148 0.256 -0.314 1.885 -0.198 0.416 C3 ZJU 5 ZJU C4 C4 C 0 1 N N N N N N 0.667 0.554 -0.223 0.585 0.242 -0.209 C4 ZJU 6 ZJU O3 O3 O 0 1 N N N N N N 0.241 1.714 -0.127 0.587 0.792 -1.289 O3 ZJU 7 ZJU N N N 0 1 N N N Y Y N -0.158 -0.510 -0.262 -0.579 0.023 0.434 N ZJU 8 ZJU CA CA C 0 1 N N S N Y N -1.612 -0.454 -0.191 -1.842 0.450 -0.172 CA ZJU 9 ZJU CB CB C 0 1 N N N N N N -2.259 -1.723 -0.750 -2.986 -0.407 0.373 CB ZJU 10 ZJU CG CG C 0 1 N N N N N N -3.727 -1.571 -1.045 -2.796 -1.836 -0.066 CG ZJU 11 ZJU OD2 OD2 O 0 1 N N N N N N -3.967 -0.855 -2.113 -3.684 -2.774 0.298 OD2 ZJU 12 ZJU OD1 OD1 O 0 1 N N N N N N -4.605 -2.063 -0.361 -1.843 -2.138 -0.745 OD1 ZJU 13 ZJU C C C 0 1 N N N N Y Y -2.032 -0.186 1.249 -2.096 1.898 0.162 C ZJU 14 ZJU OXT OXT O 0 1 N Y N N Y Y -2.605 0.983 1.391 -3.203 2.507 -0.291 OXT ZJU 15 ZJU O O O 0 1 N N N N Y Y -1.848 -0.973 2.147 -1.303 2.510 0.838 O ZJU 16 ZJU H1 H1 H 0 1 N N N N N N 5.981 0.789 -0.683 6.311 -0.355 -0.089 H1 ZJU 17 ZJU H6 H6 H 0 1 N N N N N N 2.623 1.654 1.225 3.062 1.245 -0.666 H6 ZJU 18 ZJU H3 H3 H 0 1 N N N N N N 2.895 2.249 -0.449 2.915 -0.335 -1.472 H3 ZJU 19 ZJU H4 H4 H 0 1 N N N N N N 2.411 0.089 -1.369 1.867 -1.277 0.569 H4 ZJU 20 ZJU H5 H5 H 0 1 N N N N N N 2.362 -0.654 0.265 2.015 0.304 1.374 H5 ZJU 21 ZJU H H H 0 1 N N N Y Y N 0.262 -1.413 -0.347 -0.581 -0.417 1.299 H ZJU 22 ZJU HA HA H 0 1 N N N N Y N -1.959 0.392 -0.802 -1.784 0.332 -1.254 HA ZJU 23 ZJU HB2 HB2 H 0 1 N N N N N N -1.743 -1.994 -1.683 -2.988 -0.359 1.462 HB2 ZJU 24 ZJU HB3 HB3 H 0 1 N N N N N N -2.134 -2.530 -0.014 -3.935 -0.033 -0.009 HB3 ZJU 25 ZJU HD2 HD2 H 0 1 N N N N N N -4.905 -0.793 -2.249 -3.520 -3.677 -0.007 HD2 ZJU 26 ZJU HXT HXT H 0 1 N Y N N Y Y -2.848 1.109 2.301 -3.322 3.436 -0.051 HXT ZJU 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZJU O1 C1 SING N N 1 ZJU C1 O2 DOUB N N 2 ZJU C1 C2 SING N N 3 ZJU C2 C3 SING N N 4 ZJU C3 C4 SING N N 5 ZJU C4 O3 DOUB N N 6 ZJU C4 N SING N N 7 ZJU N CA SING N N 8 ZJU CA CB SING N N 9 ZJU CB CG SING N N 10 ZJU CG OD2 SING N N 11 ZJU CG OD1 DOUB N N 12 ZJU CA C SING N N 13 ZJU C OXT SING N N 14 ZJU C O DOUB N N 15 ZJU O1 H1 SING N N 16 ZJU C2 H6 SING N N 17 ZJU C2 H3 SING N N 18 ZJU C3 H4 SING N N 19 ZJU C3 H5 SING N N 20 ZJU N H SING N N 21 ZJU CA HA SING N N 22 ZJU CB HB2 SING N N 23 ZJU CB HB3 SING N N 24 ZJU OD2 HD2 SING N N 25 ZJU OXT HXT SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZJU InChI InChI 1.06 "InChI=1S/C8H11NO7/c10-5(1-2-6(11)12)9-4(8(15)16)3-7(13)14/h4H,1-3H2,(H,9,10)(H,11,12)(H,13,14)(H,15,16)/t4-/m0/s1" ZJU InChIKey InChI 1.06 YTMGDVQAVPGKLG-BYPYZUCNSA-N ZJU SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCC(=O)N[C@@H](CC(O)=O)C(O)=O" ZJU SMILES CACTVS 3.385 "OC(=O)CCC(=O)N[CH](CC(O)=O)C(O)=O" ZJU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC(=O)O)C(=O)NC(CC(=O)O)C(=O)O" ZJU SMILES "OpenEye OEToolkits" 2.0.7 "C(CC(=O)O)C(=O)NC(CC(=O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id ZJU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(4-oxidanyl-4-oxidanylidene-butanoyl)amino]butanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZJU "Create component" 2024-02-14 PDBE ZJU "Modify descriptor" 2024-02-14 PDBE ZJU "Other modification" 2024-02-14 PDBE ZJU "Initial release" 2024-04-24 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZJU _pdbx_chem_comp_synonyms.name "2-[(4-oxidanyl-4-oxidanylidene-butanoyl)amino]butanedioic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #