data_ZM2 # _chem_comp.id ZM2 _chem_comp.name "(1R,2S,3R,4R,5S,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H18 O24 P6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-21 _chem_comp.pdbx_modified_date 2022-06-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 660.035 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZM2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TN4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZM2 O34 O1 O 0 1 N N N 19.697 5.245 18.851 -1.665 -2.666 1.758 O34 ZM2 1 ZM2 PA4 P1 P 0 1 N N N 18.098 5.394 19.120 -0.663 -3.377 0.933 PA4 ZM2 2 ZM2 O24 O2 O 0 1 N N N 17.713 6.859 19.195 0.490 -3.974 1.885 O24 ZM2 3 ZM2 O44 O3 O 0 1 N N N 17.646 4.418 20.320 -1.378 -4.579 0.137 O44 ZM2 4 ZM2 O14 O4 O 0 1 N N N 17.476 4.680 17.747 -0.009 -2.349 -0.120 O14 ZM2 5 ZM2 C4 C1 C 0 1 N N S 17.397 5.353 16.488 0.609 -1.122 0.270 C4 ZM2 6 ZM2 C5 C2 C 0 1 N N R 18.170 4.558 15.469 2.073 -1.124 -0.173 C5 ZM2 7 ZM2 O15 O5 O 0 1 N N N 19.623 4.599 15.779 2.755 -2.218 0.443 O15 ZM2 8 ZM2 PA5 P2 P 0 1 N N N 20.427 3.217 16.144 3.469 -3.392 -0.397 PA5 ZM2 9 ZM2 O35 O6 O 0 1 N N N 19.337 2.060 15.841 4.698 -2.778 -1.237 O35 ZM2 10 ZM2 O45 O7 O 0 1 N N N 20.767 3.436 17.573 4.020 -4.517 0.614 O45 ZM2 11 ZM2 O25 O8 O 0 1 N N N 21.698 3.334 15.107 2.490 -3.999 -1.326 O25 ZM2 12 ZM2 C6 C3 C 0 1 N N N 17.984 5.231 14.102 2.735 0.190 0.246 C6 ZM2 13 ZM2 O16 O9 O 0 1 N N N 18.676 4.470 13.182 4.103 0.188 -0.168 O16 ZM2 14 ZM2 C1 C4 C 0 1 N N S 16.513 5.319 13.648 2.004 1.361 -0.414 C1 ZM2 15 ZM2 O11 O10 O 0 1 N N N 16.566 6.103 12.492 2.623 2.589 -0.023 O11 ZM2 16 ZM2 PA1 P3 P 0 1 N N N 15.404 6.146 11.285 3.276 3.616 -1.077 PA1 ZM2 17 ZM2 O31 O11 O 0 1 N N N 16.317 5.903 10.024 4.278 2.906 -1.902 O31 ZM2 18 ZM2 O41 O12 O 0 1 N N N 14.371 5.172 11.603 2.124 4.214 -2.029 O41 ZM2 19 ZM2 O21 O13 O 0 1 N N N 14.856 7.673 11.324 3.991 4.819 -0.281 O21 ZM2 20 ZM2 C2 C5 C 0 1 N N S 15.649 5.996 14.725 0.540 1.364 0.029 C2 ZM2 21 ZM2 O12 O14 O 0 1 N N N 16.029 7.398 14.850 0.473 1.500 1.450 O12 ZM2 22 ZM2 PA2 P4 P 0 1 N N N 15.043 8.690 14.715 -0.275 2.726 2.179 PA2 ZM2 23 ZM2 O32 O15 O 0 1 N N N 16.229 9.622 14.534 -0.266 2.489 3.772 O32 ZM2 24 ZM2 O42 O16 O 0 1 N N N 14.295 8.836 15.944 0.489 4.101 1.837 O42 ZM2 25 ZM2 O22 O17 O 0 1 N N N 14.156 8.524 13.453 -1.673 2.806 1.700 O22 ZM2 26 ZM2 C3 C6 C 0 1 N N N 15.901 5.354 16.108 -0.122 0.050 -0.389 C3 ZM2 27 ZM2 O13 O18 O 0 1 N N N 15.364 6.086 17.118 -1.490 0.052 0.024 O13 ZM2 28 ZM2 PA3 P5 P 0 1 N N N 13.908 5.781 17.718 -2.718 -0.082 -1.007 PA3 ZM2 29 ZM2 O33 O19 O 0 1 N N N 13.761 4.269 17.971 -2.676 -1.531 -1.707 O33 ZM2 30 ZM2 O43 O20 O 0 1 N N N 12.806 6.456 16.905 -2.609 0.969 -2.043 O43 ZM2 31 ZM2 O23 O21 O 0 1 N N N 14.095 6.508 19.149 -4.108 0.090 -0.212 O23 ZM2 32 ZM2 PB3 P6 P 0 1 N N N 14.177 8.247 19.436 -5.628 0.364 -0.665 PB3 ZM2 33 ZM2 O63 O22 O 0 1 N N N 13.694 8.308 21.033 -6.619 0.044 0.563 O63 ZM2 34 ZM2 O73 O23 O 0 1 N N N 15.647 8.692 18.952 -5.790 1.906 -1.098 O73 ZM2 35 ZM2 O53 O24 O 0 1 N N N 12.976 8.874 18.319 -5.967 -0.509 -1.811 O53 ZM2 36 ZM2 H1 H1 H 0 1 N N N 18.486 7.397 19.069 1.182 -4.454 1.411 H1 ZM2 37 ZM2 H2 H2 H 0 1 N N N 18.402 3.941 20.642 -1.794 -5.238 0.710 H2 ZM2 38 ZM2 H3 H3 H 0 1 N N N 17.776 6.384 16.548 0.557 -1.018 1.354 H3 ZM2 39 ZM2 H4 H4 H 0 1 N N N 17.807 3.520 15.433 2.125 -1.228 -1.257 H4 ZM2 40 ZM2 H5 H5 H 0 1 N N N 19.593 1.579 15.063 5.379 -2.363 -0.692 H5 ZM2 41 ZM2 H6 H6 H 0 1 N N N 20.266 4.170 17.909 4.463 -5.256 0.176 H6 ZM2 42 ZM2 H7 H7 H 0 1 N N N 18.395 6.250 14.154 2.683 0.294 1.329 H7 ZM2 43 ZM2 H8 H8 H 0 1 N N N 19.586 4.404 13.445 4.585 0.993 0.065 H8 ZM2 44 ZM2 H9 H9 H 0 1 N N N 16.127 4.310 13.441 2.056 1.258 -1.498 H9 ZM2 45 ZM2 H10 H10 H 0 1 N N N 14.388 4.471 10.962 1.431 4.694 -1.555 H10 ZM2 46 ZM2 H11 H11 H 0 1 N N N 14.610 7.899 12.213 4.408 5.477 -0.854 H11 ZM2 47 ZM2 H12 H12 H 0 1 N N N 14.585 5.901 14.462 0.020 2.198 -0.441 H12 ZM2 48 ZM2 H13 H13 H 0 1 N N N 16.233 9.962 13.647 -0.701 3.190 4.276 H13 ZM2 49 ZM2 H14 H14 H 0 1 N N N 13.365 8.803 15.755 1.413 4.119 2.122 H14 ZM2 50 ZM2 H15 H15 H 0 1 N N N 15.526 4.320 16.102 -0.070 -0.054 -1.473 H15 ZM2 51 ZM2 H16 H16 H 0 1 N N N 12.962 3.955 17.563 -2.743 -2.270 -1.086 H16 ZM2 52 ZM2 H17 H17 H 0 1 N N N 12.822 8.682 21.087 -7.554 0.188 0.362 H17 ZM2 53 ZM2 H18 H18 H 0 1 N N N 15.577 9.207 18.157 -5.584 2.536 -0.394 H18 ZM2 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZM2 O31 PA1 DOUB N N 1 ZM2 PA1 O21 SING N N 2 ZM2 PA1 O41 SING N N 3 ZM2 PA1 O11 SING N N 4 ZM2 O11 C1 SING N N 5 ZM2 O16 C6 SING N N 6 ZM2 O22 PA2 DOUB N N 7 ZM2 C1 C6 SING N N 8 ZM2 C1 C2 SING N N 9 ZM2 C6 C5 SING N N 10 ZM2 O32 PA2 SING N N 11 ZM2 PA2 O12 SING N N 12 ZM2 PA2 O42 SING N N 13 ZM2 C2 O12 SING N N 14 ZM2 C2 C3 SING N N 15 ZM2 O25 PA5 DOUB N N 16 ZM2 C5 O15 SING N N 17 ZM2 C5 C4 SING N N 18 ZM2 O15 PA5 SING N N 19 ZM2 O35 PA5 SING N N 20 ZM2 C3 C4 SING N N 21 ZM2 C3 O13 SING N N 22 ZM2 PA5 O45 SING N N 23 ZM2 C4 O14 SING N N 24 ZM2 O43 PA3 DOUB N N 25 ZM2 O13 PA3 SING N N 26 ZM2 PA3 O33 SING N N 27 ZM2 PA3 O23 SING N N 28 ZM2 O14 PA4 SING N N 29 ZM2 O53 PB3 DOUB N N 30 ZM2 O34 PA4 DOUB N N 31 ZM2 O73 PB3 SING N N 32 ZM2 PA4 O24 SING N N 33 ZM2 PA4 O44 SING N N 34 ZM2 O23 PB3 SING N N 35 ZM2 PB3 O63 SING N N 36 ZM2 O24 H1 SING N N 37 ZM2 O44 H2 SING N N 38 ZM2 C4 H3 SING N N 39 ZM2 C5 H4 SING N N 40 ZM2 O35 H5 SING N N 41 ZM2 O45 H6 SING N N 42 ZM2 C6 H7 SING N N 43 ZM2 O16 H8 SING N N 44 ZM2 C1 H9 SING N N 45 ZM2 O41 H10 SING N N 46 ZM2 O21 H11 SING N N 47 ZM2 C2 H12 SING N N 48 ZM2 O32 H13 SING N N 49 ZM2 O42 H14 SING N N 50 ZM2 C3 H15 SING N N 51 ZM2 O33 H16 SING N N 52 ZM2 O63 H17 SING N N 53 ZM2 O73 H18 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZM2 SMILES ACDLabs 12.01 "O=P(O)(O)OC1C(OP(=O)(O)O)C(O)C(OP(=O)(O)O)C(OP(=O)(O)O)C1OP(=O)(O)OP(=O)(O)O" ZM2 InChI InChI 1.03 "InChI=1S/C6H18O24P6/c7-1-2(25-31(8,9)10)4(27-33(14,15)16)6(29-36(23,24)30-35(20,21)22)5(28-34(17,18)19)3(1)26-32(11,12)13/h1-7H,(H,23,24)(H2,8,9,10)(H2,11,12,13)(H2,14,15,16)(H2,17,18,19)(H2,20,21,22)/t1-,2-,3+,4-,5-,6-/m0/s1" ZM2 InChIKey InChI 1.03 FFZGWHDHUIRNPY-PTQMNWPWSA-N ZM2 SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(=O)O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]1O[P](O)(O)=O" ZM2 SMILES CACTVS 3.385 "O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O" ZM2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@H]1([C@@H](C([C@H]([C@@H](C1O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" ZM2 SMILES "OpenEye OEToolkits" 2.0.7 "C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZM2 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3R,4R,5S,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate" ZM2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{S},3~{R},5~{S},6~{S})-4-oxidanyl-2,3,5,6-tetraphosphonooxy-cyclohexyl] phosphono hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZM2 "Create component" 2022-01-21 RCSB ZM2 "Initial release" 2022-06-15 RCSB #