data_ZO9 # _chem_comp.id ZO9 _chem_comp.name "4-[1-(cyclopropylmethyl)-1H-benzimidazol-2-yl]-1,2,5-oxadiazol-3-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H13 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-08-22 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 255.275 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZO9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4C36 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZO9 C C C 0 1 Y N N -26.709 -9.901 0.473 -3.954 1.911 -0.147 C ZO9 1 ZO9 N N N 0 1 Y N N -29.806 -10.039 -1.613 -0.249 1.731 -0.177 N ZO9 2 ZO9 O O O 0 1 Y N N -32.165 -10.223 -5.468 3.701 -0.424 0.314 O ZO9 3 ZO9 C1 C1 C 0 1 Y N N -25.817 -9.578 -0.547 -4.169 0.587 0.210 C1 ZO9 4 ZO9 N1 N1 N 0 1 Y N N -28.375 -9.509 -3.279 -0.558 -0.364 0.388 N1 ZO9 5 ZO9 C2 C2 C 0 1 Y N N -26.257 -9.431 -1.860 -3.103 -0.264 0.415 C2 ZO9 6 ZO9 N2 N2 N 0 1 Y N N -30.829 -10.120 -5.100 2.520 -0.665 0.403 N2 ZO9 7 ZO9 C3 C3 C 0 1 Y N N -27.612 -9.623 -2.118 -1.807 0.208 0.262 C3 ZO9 8 ZO9 N3 N3 N 0 1 Y N N -33.013 -10.092 -4.356 3.991 0.707 0.006 N3 ZO9 9 ZO9 C4 C4 C 0 1 Y N N -28.513 -9.946 -1.105 -1.589 1.550 -0.101 C4 ZO9 10 ZO9 N4 N4 N 0 1 N N N -32.636 -9.745 -2.073 2.767 2.748 -0.513 N4 ZO9 11 ZO9 C5 C5 C 0 1 Y N N -28.059 -10.083 0.207 -2.686 2.394 -0.303 C5 ZO9 12 ZO9 C6 C6 C 0 1 Y N N -29.678 -9.763 -2.899 0.364 0.609 0.109 C6 ZO9 13 ZO9 C7 C7 C 0 1 N N N -27.891 -9.066 -4.601 -0.271 -1.754 0.753 C7 ZO9 14 ZO9 C8 C8 C 0 1 N N N -27.512 -10.245 -5.472 -0.200 -2.609 -0.514 C8 ZO9 15 ZO9 C9 C9 C 0 1 N N N -26.499 -10.061 -6.558 0.207 -4.076 -0.354 C9 ZO9 16 ZO9 C10 C10 C 0 1 N N N -26.144 -10.830 -5.329 -1.245 -3.716 -0.678 C10 ZO9 17 ZO9 C11 C11 C 0 1 Y N N -30.847 -9.916 -3.795 1.831 0.422 0.128 C11 ZO9 18 ZO9 C12 C12 C 0 1 Y N N -32.219 -9.931 -3.330 2.896 1.411 -0.159 C12 ZO9 19 ZO9 H H H 0 1 N N N -26.345 -10.011 1.484 -4.799 2.564 -0.308 H ZO9 20 ZO9 H1 H1 H 0 1 N N N -24.771 -9.440 -0.317 -5.178 0.221 0.329 H1 ZO9 21 ZO9 H2 H2 H 0 1 N N N -25.569 -9.176 -2.653 -3.277 -1.293 0.694 H2 ZO9 22 ZO9 HN4 HN4 H 0 1 N N N -33.636 -9.749 -2.049 3.559 3.285 -0.674 HN4 ZO9 23 ZO9 HN4A HN4A H 0 0 N N N -32.285 -10.481 -1.493 1.886 3.144 -0.601 HN4A ZO9 24 ZO9 H5 H5 H 0 1 N N N -28.747 -10.327 1.003 -2.531 3.426 -0.581 H5 ZO9 25 ZO9 H7 H7 H 0 1 N N N -28.686 -8.493 -5.100 0.684 -1.802 1.277 H7 ZO9 26 ZO9 H7A H7A H 0 1 N N N -27.008 -8.424 -4.463 -1.061 -2.130 1.402 H7A ZO9 27 ZO9 H8 H8 H 0 1 N N N -28.321 -10.959 -5.685 0.129 -2.091 -1.414 H8 ZO9 28 ZO9 H9 H9 H 0 1 N N N -26.621 -10.584 -7.518 0.804 -4.522 -1.150 H9 ZO9 29 ZO9 H9A H9A H 0 1 N N N -26.055 -9.070 -6.734 0.425 -4.431 0.653 H9A ZO9 30 ZO9 H10 H10 H 0 1 N N N -25.438 -10.406 -4.600 -1.982 -3.834 0.116 H10 ZO9 31 ZO9 H10A H10A H 0 0 N N N -26.004 -11.920 -5.384 -1.602 -3.925 -1.686 H10A ZO9 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZO9 C C1 DOUB Y N 1 ZO9 C C5 SING Y N 2 ZO9 N C4 SING Y N 3 ZO9 N C6 DOUB Y N 4 ZO9 O N2 SING Y N 5 ZO9 O N3 SING Y N 6 ZO9 C1 C2 SING Y N 7 ZO9 N1 C3 SING Y N 8 ZO9 N1 C6 SING Y N 9 ZO9 N1 C7 SING N N 10 ZO9 C2 C3 DOUB Y N 11 ZO9 N2 C11 DOUB Y N 12 ZO9 C3 C4 SING Y N 13 ZO9 N3 C12 DOUB Y N 14 ZO9 C4 C5 DOUB Y N 15 ZO9 N4 C12 SING N N 16 ZO9 C6 C11 SING N N 17 ZO9 C7 C8 SING N N 18 ZO9 C8 C9 SING N N 19 ZO9 C8 C10 SING N N 20 ZO9 C9 C10 SING N N 21 ZO9 C11 C12 SING Y N 22 ZO9 C H SING N N 23 ZO9 C1 H1 SING N N 24 ZO9 C2 H2 SING N N 25 ZO9 N4 HN4 SING N N 26 ZO9 N4 HN4A SING N N 27 ZO9 C5 H5 SING N N 28 ZO9 C7 H7 SING N N 29 ZO9 C7 H7A SING N N 30 ZO9 C8 H8 SING N N 31 ZO9 C9 H9 SING N N 32 ZO9 C9 H9A SING N N 33 ZO9 C10 H10 SING N N 34 ZO9 C10 H10A SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZO9 SMILES ACDLabs 12.01 "n1onc(N)c1c2nc4c(n2CC3CC3)cccc4" ZO9 InChI InChI 1.03 "InChI=1S/C13H13N5O/c14-12-11(16-19-17-12)13-15-9-3-1-2-4-10(9)18(13)7-8-5-6-8/h1-4,8H,5-7H2,(H2,14,17)" ZO9 InChIKey InChI 1.03 LLDVRUBUBPSOMY-UHFFFAOYSA-N ZO9 SMILES_CANONICAL CACTVS 3.385 Nc1nonc1c2nc3ccccc3n2CC4CC4 ZO9 SMILES CACTVS 3.385 Nc1nonc1c2nc3ccccc3n2CC4CC4 ZO9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc2c(c1)nc(n2CC3CC3)c4c(non4)N" ZO9 SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc2c(c1)nc(n2CC3CC3)c4c(non4)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZO9 "SYSTEMATIC NAME" ACDLabs 12.01 "4-[1-(cyclopropylmethyl)-1H-benzimidazol-2-yl]-1,2,5-oxadiazol-3-amine" ZO9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "4-[1-(cyclopropylmethyl)benzimidazol-2-yl]-1,2,5-oxadiazol-3-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZO9 "Create component" 2013-08-22 EBI ZO9 "Other modification" 2013-08-23 EBI ZO9 "Initial release" 2013-10-09 RCSB ZO9 "Modify descriptor" 2014-09-05 RCSB #