data_ZXY # _chem_comp.id ZXY _chem_comp.name "N-(3-{[2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-1-benzopyran-3-yl]oxy}propyl)-1-[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]-L-prolinamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H30 N2 O11" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Montbretin A analogue M06-MbA" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-03-25 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 618.587 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZXY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6OCN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZXY N N1 N 0 1 N N N 13.020 84.725 159.299 4.716 0.153 2.194 N ZXY 1 ZXY CA C1 C 0 1 N N S 12.773 84.964 160.733 3.395 -0.139 2.771 CA ZXY 2 ZXY CB C2 C 0 1 N N N 14.020 85.712 161.195 3.333 0.553 4.148 CB ZXY 3 ZXY CG C3 C 0 1 N N N 14.691 86.253 159.957 4.407 1.666 4.027 CG ZXY 4 ZXY CD C4 C 0 1 N N N 14.265 85.343 158.810 5.481 0.968 3.156 CD ZXY 5 ZXY C C5 C 0 1 N N N 11.494 85.734 161.007 2.313 0.405 1.874 C ZXY 6 ZXY O O1 O 0 1 N N N 10.847 85.522 162.023 2.578 1.255 1.051 O ZXY 7 ZXY N1 N2 N 0 1 N N N 11.108 86.620 160.086 1.050 -0.052 1.988 N1 ZXY 8 ZXY C2 C6 C 0 1 N N N 9.876 87.374 160.167 -0.002 0.477 1.117 C2 ZXY 9 ZXY C3 C7 C 0 1 N N N 8.671 86.594 159.653 -1.331 -0.205 1.449 C3 ZXY 10 ZXY C4 C8 C 0 1 N N N 8.854 86.068 158.233 -2.451 0.434 0.627 C4 ZXY 11 ZXY O5 O2 O 0 1 N N N 8.760 87.151 157.300 -3.707 -0.123 1.020 O5 ZXY 12 ZXY C6 C9 C 0 1 N N N 9.449 86.999 156.152 -4.803 0.260 0.309 C6 ZXY 13 ZXY C7 C10 C 0 1 N N N 8.746 86.774 154.901 -5.481 -0.646 -0.450 C7 ZXY 14 ZXY O6 O3 O 0 1 N N N 9.454 86.653 153.770 -6.570 -0.317 -1.164 O6 ZXY 15 ZXY C9 C11 C 0 1 Y N N 10.821 86.699 153.732 -7.070 0.936 -1.181 C9 ZXY 16 ZXY C10 C12 C 0 1 Y N N 11.590 86.882 154.876 -6.446 1.949 -0.432 C10 ZXY 17 ZXY C11 C13 C 0 1 N N N 10.912 87.056 156.164 -5.252 1.605 0.356 C11 ZXY 18 ZXY C12 C14 C 0 1 Y N N 11.421 86.542 152.500 -8.197 1.240 -1.931 C12 ZXY 19 ZXY C13 C15 C 0 1 Y N N 12.814 86.591 152.425 -8.698 2.532 -1.938 C13 ZXY 20 ZXY C14 C16 C 0 1 Y N N 13.574 86.791 153.559 -8.082 3.536 -1.197 C14 ZXY 21 ZXY C15 C17 C 0 1 Y N N 12.975 86.943 154.788 -6.959 3.253 -0.444 C15 ZXY 22 ZXY O16 O4 O 0 1 N N N 11.556 87.257 157.219 -4.674 2.444 1.029 O16 ZXY 23 ZXY O17 O5 O 0 1 N N N 13.753 87.120 155.874 -6.356 4.231 0.279 O17 ZXY 24 ZXY O18 O6 O 0 1 N N N 13.440 86.452 151.255 -9.800 2.821 -2.675 O18 ZXY 25 ZXY C19 C18 C 0 1 Y N N 7.286 86.789 154.758 -5.001 -2.040 -0.488 C19 ZXY 26 ZXY C20 C19 C 0 1 Y N N 6.771 87.569 153.710 -4.686 -2.706 0.700 C20 ZXY 27 ZXY C21 C20 C 0 1 Y N N 5.398 87.687 153.537 -4.238 -4.012 0.658 C21 ZXY 28 ZXY C22 C21 C 0 1 Y N N 4.535 87.037 154.388 -4.099 -4.662 -0.568 C22 ZXY 29 ZXY C23 C22 C 0 1 Y N N 5.047 86.291 155.445 -4.410 -4.001 -1.747 C23 ZXY 30 ZXY C24 C23 C 0 1 Y N N 6.415 86.182 155.632 -4.864 -2.700 -1.712 C24 ZXY 31 ZXY O25 O7 O 0 1 N N N 3.192 87.165 154.200 -3.656 -5.946 -0.607 O25 ZXY 32 ZXY O26 O8 O 0 1 N N N 4.847 88.395 152.511 -3.931 -4.663 1.812 O26 ZXY 33 ZXY C27 C24 C 0 1 N N N 12.139 84.033 158.588 5.156 -0.260 0.989 C27 ZXY 34 ZXY C28 C25 C 0 1 N N N 12.356 83.870 157.128 6.498 0.105 0.537 C28 ZXY 35 ZXY C29 C26 C 0 1 N N N 11.290 83.507 156.383 6.939 -0.309 -0.670 C29 ZXY 36 ZXY O30 O9 O 0 1 N N N 11.143 83.581 159.144 4.437 -0.936 0.278 O30 ZXY 37 ZXY C31 C27 C 0 1 Y N N 11.225 83.355 154.913 8.288 0.057 -1.125 C31 ZXY 38 ZXY C32 C28 C 0 1 Y N N 12.363 83.299 154.098 9.117 0.835 -0.308 C32 ZXY 39 ZXY C33 C29 C 0 1 Y N N 12.200 83.148 152.721 10.381 1.176 -0.737 C33 ZXY 40 ZXY C34 C30 C 0 1 Y N N 10.924 83.115 152.163 10.836 0.751 -1.977 C34 ZXY 41 ZXY C35 C31 C 0 1 Y N N 9.808 83.166 152.966 10.016 -0.024 -2.797 C35 ZXY 42 ZXY C36 C32 C 0 1 Y N N 9.964 83.266 154.339 8.750 -0.376 -2.373 C36 ZXY 43 ZXY O37 O10 O 0 1 N N N 10.688 82.987 150.812 12.083 1.092 -2.395 O37 ZXY 44 ZXY O38 O11 O 0 1 N N N 8.550 83.114 152.442 10.465 -0.438 -4.012 O38 ZXY 45 ZXY HA H1 H 0 1 N N N 12.725 84.000 161.260 3.272 -1.216 2.888 HA ZXY 46 ZXY HB3 H2 H 0 1 N N N 14.698 85.026 161.724 2.347 0.985 4.319 HB3 ZXY 47 ZXY HB2 H3 H 0 1 N N N 13.739 86.538 161.865 3.588 -0.148 4.944 HB2 ZXY 48 ZXY HG3 H4 H 0 1 N N N 15.784 86.231 160.075 4.004 2.544 3.523 HG3 ZXY 49 ZXY HG2 H5 H 0 1 N N N 14.364 87.286 159.766 4.808 1.930 5.006 HG2 ZXY 50 ZXY HD3 H6 H 0 1 N N N 15.030 84.579 158.611 6.115 0.331 3.773 HD3 ZXY 51 ZXY HD2 H7 H 0 1 N N N 14.081 85.925 157.895 6.083 1.709 2.630 HD2 ZXY 52 ZXY HN1 H8 H 0 1 N N N 11.703 86.771 159.297 0.838 -0.732 2.647 HN1 ZXY 53 ZXY H21 H9 H 0 1 N N N 9.984 88.289 159.567 -0.096 1.552 1.272 H21 ZXY 54 ZXY H2 H10 H 0 1 N N N 9.698 87.644 161.218 0.256 0.282 0.076 H2 ZXY 55 ZXY H3 H11 H 0 1 N N N 7.793 87.257 159.669 -1.264 -1.266 1.211 H3 ZXY 56 ZXY H31 H12 H 0 1 N N N 8.497 85.739 160.323 -1.545 -0.084 2.511 H31 ZXY 57 ZXY H4 H13 H 0 1 N N N 8.071 85.328 158.014 -2.461 1.510 0.799 H4 ZXY 58 ZXY H41 H14 H 0 1 N N N 9.842 85.593 158.144 -2.283 0.237 -0.432 H41 ZXY 59 ZXY H12 H15 H 0 1 N N N 10.826 86.385 151.613 -8.683 0.470 -2.510 H12 ZXY 60 ZXY H14 H16 H 0 1 N N N 14.651 86.829 153.481 -8.483 4.539 -1.212 H14 ZXY 61 ZXY HO17 H17 H 0 0 N N N 13.205 87.217 156.644 -6.695 4.319 1.180 HO17 ZXY 62 ZXY HO18 H18 H 0 0 N N N 14.379 86.511 151.389 -10.634 2.710 -2.197 HO18 ZXY 63 ZXY H20 H19 H 0 1 N N N 7.444 88.079 153.037 -4.794 -2.201 1.648 H20 ZXY 64 ZXY H23 H20 H 0 1 N N N 4.372 85.793 156.125 -4.301 -4.509 -2.694 H23 ZXY 65 ZXY H24 H21 H 0 1 N N N 6.800 85.617 156.468 -5.110 -2.189 -2.632 H24 ZXY 66 ZXY HO25 H22 H 0 0 N N N 2.730 86.662 154.861 -4.361 -6.607 -0.560 HO25 ZXY 67 ZXY HO26 H23 H 0 0 N N N 3.900 88.353 152.570 -4.675 -5.140 2.204 HO26 ZXY 68 ZXY H28 H24 H 0 1 N N N 13.325 84.035 156.681 7.136 0.705 1.168 H28 ZXY 69 ZXY H29 H25 H 0 1 N N N 10.378 83.304 156.924 6.301 -0.909 -1.301 H29 ZXY 70 ZXY H32 H26 H 0 1 N N N 13.351 83.372 154.529 8.766 1.167 0.658 H32 ZXY 71 ZXY H33 H27 H 0 1 N N N 13.067 83.056 152.084 11.020 1.777 -0.106 H33 ZXY 72 ZXY H36 H28 H 0 1 N N N 9.090 83.275 154.973 8.114 -0.976 -3.007 H36 ZXY 73 ZXY HO37 H29 H 0 0 N N N 9.752 82.987 150.652 12.768 0.457 -2.145 HO37 ZXY 74 ZXY HO38 H30 H 0 0 N N N 7.912 83.162 153.144 10.920 -1.291 -3.994 HO38 ZXY 75 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZXY O37 C34 SING N N 1 ZXY O18 C13 SING N N 2 ZXY C34 C33 DOUB Y N 3 ZXY C34 C35 SING Y N 4 ZXY C13 C12 DOUB Y N 5 ZXY C13 C14 SING Y N 6 ZXY O38 C35 SING N N 7 ZXY C12 C9 SING Y N 8 ZXY O26 C21 SING N N 9 ZXY C33 C32 SING Y N 10 ZXY C35 C36 DOUB Y N 11 ZXY C21 C20 DOUB Y N 12 ZXY C21 C22 SING Y N 13 ZXY C14 C15 DOUB Y N 14 ZXY C20 C19 SING Y N 15 ZXY C9 O6 SING N N 16 ZXY C9 C10 DOUB Y N 17 ZXY O6 C7 SING N N 18 ZXY C32 C31 DOUB Y N 19 ZXY O25 C22 SING N N 20 ZXY C36 C31 SING Y N 21 ZXY C22 C23 DOUB Y N 22 ZXY C19 C7 SING N N 23 ZXY C19 C24 DOUB Y N 24 ZXY C15 C10 SING Y N 25 ZXY C15 O17 SING N N 26 ZXY C10 C11 SING N N 27 ZXY C7 C6 DOUB N N 28 ZXY C31 C29 SING N N 29 ZXY C23 C24 SING Y N 30 ZXY C6 C11 SING N N 31 ZXY C6 O5 SING N N 32 ZXY C11 O16 DOUB N N 33 ZXY C29 C28 DOUB N E 34 ZXY C28 C27 SING N N 35 ZXY O5 C4 SING N N 36 ZXY C4 C3 SING N N 37 ZXY C27 O30 DOUB N N 38 ZXY C27 N SING N N 39 ZXY CD N SING N N 40 ZXY CD CG SING N N 41 ZXY N CA SING N N 42 ZXY C3 C2 SING N N 43 ZXY CG CB SING N N 44 ZXY N1 C2 SING N N 45 ZXY N1 C SING N N 46 ZXY CA C SING N N 47 ZXY CA CB SING N N 48 ZXY C O DOUB N N 49 ZXY CA HA SING N N 50 ZXY CB HB3 SING N N 51 ZXY CB HB2 SING N N 52 ZXY CG HG3 SING N N 53 ZXY CG HG2 SING N N 54 ZXY CD HD3 SING N N 55 ZXY CD HD2 SING N N 56 ZXY N1 HN1 SING N N 57 ZXY C2 H21 SING N N 58 ZXY C2 H2 SING N N 59 ZXY C3 H3 SING N N 60 ZXY C3 H31 SING N N 61 ZXY C4 H4 SING N N 62 ZXY C4 H41 SING N N 63 ZXY C12 H12 SING N N 64 ZXY C14 H14 SING N N 65 ZXY O17 HO17 SING N N 66 ZXY O18 HO18 SING N N 67 ZXY C20 H20 SING N N 68 ZXY C23 H23 SING N N 69 ZXY C24 H24 SING N N 70 ZXY O25 HO25 SING N N 71 ZXY O26 HO26 SING N N 72 ZXY C28 H28 SING N N 73 ZXY C29 H29 SING N N 74 ZXY C32 H32 SING N N 75 ZXY C33 H33 SING N N 76 ZXY C36 H36 SING N N 77 ZXY O37 HO37 SING N N 78 ZXY O38 HO38 SING N N 79 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZXY SMILES ACDLabs 12.01 "N4(C(C(=O)NCCCOC=1C(c3c(OC=1c2ccc(c(c2)O)O)cc(cc3O)O)=O)CCC4)C(=O)[C@H]=[C@H]c5ccc(c(c5)O)O" ZXY InChI InChI 1.03 "InChI=1S/C32H30N2O11/c35-19-15-25(40)28-26(16-19)45-30(18-6-8-22(37)24(39)14-18)31(29(28)42)44-12-2-10-33-32(43)20-3-1-11-34(20)27(41)9-5-17-4-7-21(36)23(38)13-17/h4-9,13-16,20,35-40H,1-3,10-12H2,(H,33,43)/b9-5+/t20-/m0/s1" ZXY InChIKey InChI 1.03 MYJPTGWVMBCTRI-MRSBXDGLSA-N ZXY SMILES_CANONICAL CACTVS 3.385 "Oc1cc(O)c2C(=O)C(=C(Oc2c1)c3ccc(O)c(O)c3)OCCCNC(=O)[C@@H]4CCCN4C(=O)/C=C/c5ccc(O)c(O)c5" ZXY SMILES CACTVS 3.385 "Oc1cc(O)c2C(=O)C(=C(Oc2c1)c3ccc(O)c(O)c3)OCCCNC(=O)[CH]4CCCN4C(=O)C=Cc5ccc(O)c(O)c5" ZXY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1/C=C/C(=O)N2CCC[C@H]2C(=O)NCCCOC3=C(Oc4cc(cc(c4C3=O)O)O)c5ccc(c(c5)O)O)O)O" ZXY SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=CC(=O)N2CCCC2C(=O)NCCCOC3=C(Oc4cc(cc(c4C3=O)O)O)c5ccc(c(c5)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZXY "SYSTEMATIC NAME" ACDLabs 12.01 "N-(3-{[2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-1-benzopyran-3-yl]oxy}propyl)-1-[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]-L-prolinamide" ZXY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-~{N}-[3-[2-[3,4-bis(oxidanyl)phenyl]-5,7-bis(oxidanyl)-4-oxidanylidene-chromen-3-yl]oxypropyl]-1-[(~{E})-3-[3,4-bis(oxidanyl)phenyl]prop-2-enoyl]pyrrolidine-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZXY "Create component" 2019-03-25 RCSB ZXY "Initial release" 2020-02-12 RCSB ZXY "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZXY _pdbx_chem_comp_synonyms.name "Montbretin A analogue M06-MbA" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##