data_PRDCC_002371
# 
_chem_comp.id                                    PRD_002371 
_chem_comp.name                                  "Endogenous Peptide Agonist TRH" 
_chem_comp.formula                               "C16 H23 N6 O4" 
_chem_comp.formula_weight                        363.392 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_002371 N1  N1  N 0 1 N N N 114.094 93.277 75.311 4.116  0.869  0.049  PCA 1 N   polymer 1 1 1  ? ? ? 
PRD_002371 C1  C1  C 0 1 N N S 114.977 94.335 76.104 2.819  1.335  0.552  PCA 1 CA  polymer 1 1 2  ? ? ? 
PRD_002371 C2  C2  C 0 1 N N N 114.593 95.582 75.690 2.612  2.732  -0.074 PCA 1 CB  polymer 1 1 3  ? ? ? 
PRD_002371 C3  C3  C 0 1 N N N 113.114 95.425 75.305 4.069  3.181  -0.331 PCA 1 CG  polymer 1 1 4  ? ? ? 
PRD_002371 C4  C4  C 0 1 N N N 112.983 93.905 74.847 4.841  1.886  -0.448 PCA 1 CD  polymer 1 1 5  ? ? ? 
PRD_002371 O1  O1  O 0 1 N N N 112.102 93.425 74.212 5.953  1.780  -0.920 PCA 1 OE  polymer 1 1 6  ? ? ? 
PRD_002371 C5  C5  C 0 1 N N N 114.656 94.153 77.638 1.722  0.399  0.112  PCA 1 C   polymer 1 1 7  ? ? ? 
PRD_002371 O2  O2  O 0 1 N N N 113.686 93.564 77.973 1.909  -0.362 -0.813 PCA 1 O   polymer 1 1 8  ? ? ? 
PRD_002371 N2  N2  N 0 1 N N N 115.570 94.721 78.681 0.534  0.408  0.748  HIS 2 N   polymer 1 1 9  ? ? ? 
PRD_002371 C6  C6  C 0 1 N N S 115.202 94.494 80.122 -0.533 -0.501 0.321  HIS 2 CA  polymer 1 1 10 ? ? ? 
PRD_002371 C7  C7  C 0 1 N N N 114.635 95.740 80.900 -1.870 0.074  0.709  HIS 2 C   polymer 1 1 11 ? ? ? 
PRD_002371 O3  O3  O 0 1 N N N 113.509 95.729 81.250 -1.952 0.835  1.650  HIS 2 O   polymer 1 1 12 ? ? ? 
PRD_002371 C8  C8  C 0 1 N N N 116.243 93.656 80.863 -0.346 -1.860 0.999  HIS 2 CB  polymer 1 1 13 ? ? ? 
PRD_002371 C9  C9  C 0 1 Y N N 116.062 92.184 80.504 0.922  -2.502 0.497  HIS 2 CG  polymer 1 1 14 ? ? ? 
PRD_002371 N3  N3  N 1 1 Y N N 114.997 91.652 79.930 2.125  -2.438 1.088  HIS 2 ND1 polymer 1 1 15 ? ? ? 
PRD_002371 C10 C10 C 0 1 Y N N 116.967 91.166 80.712 1.045  -3.244 -0.619 HIS 2 CD2 polymer 1 1 16 ? ? ? 
PRD_002371 C11 C11 C 0 1 Y N N 115.213 90.361 79.781 2.990  -3.109 0.377  HIS 2 CE1 polymer 1 1 17 ? ? ? 
PRD_002371 N4  N4  N 0 1 Y N N 116.405 90.060 80.253 2.357  -3.628 -0.697 HIS 2 NE2 polymer 1 1 18 ? ? ? 
PRD_002371 N5  N5  N 0 1 N N N 115.433 96.975 81.230 -2.974 -0.256 0.012  PRO 3 N   polymer 1 1 19 ? ? ? 
PRD_002371 C12 C12 C 0 1 N N S 116.927 97.318 80.907 -4.317 0.308  0.214  PRO 3 CA  polymer 1 1 20 ? ? ? 
PRD_002371 C13 C13 C 0 1 N N N 117.076 97.426 79.378 -4.293 1.792  -0.046 PRO 3 C   polymer 1 1 21 ? ? ? 
PRD_002371 O4  O4  O 0 1 N N N 116.105 97.383 78.698 -3.258 2.335  -0.370 PRO 3 O   polymer 1 1 22 ? ? ? 
PRD_002371 C14 C14 C 0 1 N N N 117.160 98.531 81.456 -5.262 -0.386 -0.790 PRO 3 CB  polymer 1 1 23 ? ? ? 
PRD_002371 C15 C15 C 0 1 N N N 115.977 98.774 82.545 -4.515 -1.706 -1.115 PRO 3 CG  polymer 1 1 24 ? ? ? 
PRD_002371 C16 C16 C 0 1 N N N 114.878 98.213 81.999 -3.036 -1.240 -1.085 PRO 3 CD  polymer 1 1 25 ? ? ? 
PRD_002371 N6  N6  N 0 1 N N N 118.398 97.589 78.743 -5.423 2.517  0.081  NH2 4 N   polymer 1 1 26 ? ? ? 
PRD_002371 H1  H1  H 0 1 N N N 114.319 92.312 75.177 4.413  -0.054 0.075  PCA 1 H   polymer 1 1 27 ? ? ? 
PRD_002371 H2  H2  H 0 1 N N N 116.043 94.134 75.922 2.840  1.408  1.639  PCA 1 HA  polymer 1 1 28 ? ? ? 
PRD_002371 H3  H3  H 0 1 N N N 114.707 96.313 76.504 2.054  2.663  -1.008 PCA 1 HB2 polymer 1 1 29 ? ? ? 
PRD_002371 H4  H4  H 0 1 N N N 115.188 95.903 74.822 2.115  3.403  0.627  PCA 1 HB3 polymer 1 1 30 ? ? ? 
PRD_002371 H5  H5  H 0 1 N N N 112.463 95.629 76.168 4.135  3.750  -1.258 PCA 1 HG2 polymer 1 1 31 ? ? ? 
PRD_002371 H6  H6  H 0 1 N N N 112.852 96.104 74.480 4.439  3.772  0.507  PCA 1 HG3 polymer 1 1 32 ? ? ? 
PRD_002371 H7  H7  H 0 1 N N N 116.392 95.231 78.429 0.384  1.017  1.488  HIS 2 H   polymer 1 1 33 ? ? ? 
PRD_002371 H8  H8  H 0 1 N N N 114.332 93.824 80.063 -0.491 -0.627 -0.761 HIS 2 HA  polymer 1 1 34 ? ? ? 
PRD_002371 H9  H9  H 0 1 N N N 117.252 93.983 80.571 -0.281 -1.722 2.078  HIS 2 HB2 polymer 1 1 35 ? ? ? 
PRD_002371 H10 H10 H 0 1 N N N 116.114 93.787 81.948 -1.195 -2.503 0.765  HIS 2 HB3 polymer 1 1 36 ? ? ? 
PRD_002371 H11 H11 H 0 1 N N N 114.171 92.144 79.656 2.321  -1.967 1.913  HIS 2 HD1 polymer 1 1 37 ? ? ? 
PRD_002371 H12 H12 H 0 1 N N N 117.945 91.254 81.162 0.260  -3.491 -1.319 HIS 2 HD2 polymer 1 1 38 ? ? ? 
PRD_002371 H13 H13 H 0 1 N N N 114.521 89.659 79.340 4.037  -3.231 0.610  HIS 2 HE1 polymer 1 1 39 ? ? ? 
PRD_002371 H14 H14 H 0 1 N N N 116.816 89.148 80.263 2.757  -4.173 -1.393 HIS 2 HE2 polymer 1 1 40 ? ? ? 
PRD_002371 H15 H15 H 0 1 N N N 117.586 96.530 81.300 -4.650 0.116  1.234  PRO 3 HA  polymer 1 1 41 ? ? ? 
PRD_002371 H16 H16 H 0 1 N N N 118.142 98.543 81.951 -6.228 -0.592 -0.330 PRO 3 HB2 polymer 1 1 42 ? ? ? 
PRD_002371 H17 H17 H 0 1 N N N 117.131 99.312 80.681 -5.382 0.220  -1.688 PRO 3 HB3 polymer 1 1 43 ? ? ? 
PRD_002371 H18 H18 H 0 1 N N N 116.225 98.288 83.500 -4.705 -2.461 -0.351 PRO 3 HG2 polymer 1 1 44 ? ? ? 
PRD_002371 H19 H19 H 0 1 N N N 115.820 99.850 82.711 -4.786 -2.076 -2.103 PRO 3 HG3 polymer 1 1 45 ? ? ? 
PRD_002371 H20 H20 H 0 1 N N N 114.383 98.912 81.310 -2.764 -0.770 -2.031 PRO 3 HD2 polymer 1 1 46 ? ? ? 
PRD_002371 H21 H21 H 0 1 N N N 114.168 97.903 82.780 -2.376 -2.082 -0.877 PRO 3 HD3 polymer 1 1 47 ? ? ? 
PRD_002371 H22 H22 H 0 1 N N N 118.469 97.662 77.748 -6.250 2.083  0.340  NH2 4 HN1 polymer 1 1 48 ? ? ? 
PRD_002371 H23 H23 H 0 1 N N N 119.223 97.626 79.307 -5.407 3.472  -0.086 NH2 4 HN2 polymer 1 1 49 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_002371 N1  C1  SING N N 1  
PRD_002371 N1  C4  SING N N 2  
PRD_002371 N1  H1  SING N N 3  
PRD_002371 C1  C2  SING N N 4  
PRD_002371 C1  C5  SING N N 5  
PRD_002371 C1  H2  SING N N 6  
PRD_002371 C2  C3  SING N N 7  
PRD_002371 C2  H3  SING N N 8  
PRD_002371 C2  H4  SING N N 9  
PRD_002371 C3  C4  SING N N 10 
PRD_002371 C3  H5  SING N N 11 
PRD_002371 C3  H6  SING N N 12 
PRD_002371 C4  O1  DOUB N N 13 
PRD_002371 C5  O2  DOUB N N 14 
PRD_002371 N2  C6  SING N N 15 
PRD_002371 N2  H7  SING N N 16 
PRD_002371 C6  C7  SING N N 17 
PRD_002371 C6  C8  SING N N 18 
PRD_002371 C6  H8  SING N N 19 
PRD_002371 C7  O3  DOUB N N 20 
PRD_002371 C8  C9  SING N N 21 
PRD_002371 C8  H9  SING N N 22 
PRD_002371 C8  H10 SING N N 23 
PRD_002371 C9  N3  SING Y N 24 
PRD_002371 C9  C10 DOUB Y N 25 
PRD_002371 N3  C11 DOUB Y N 26 
PRD_002371 N3  H11 SING N N 27 
PRD_002371 C10 N4  SING Y N 28 
PRD_002371 C10 H12 SING N N 29 
PRD_002371 C11 N4  SING Y N 30 
PRD_002371 C11 H13 SING N N 31 
PRD_002371 N4  H14 SING N N 32 
PRD_002371 N5  C12 SING N N 33 
PRD_002371 N5  C16 SING N N 34 
PRD_002371 C12 C13 SING N N 35 
PRD_002371 C12 C14 SING N N 36 
PRD_002371 C12 H15 SING N N 37 
PRD_002371 C13 O4  DOUB N N 38 
PRD_002371 C14 C15 SING N N 39 
PRD_002371 C14 H16 SING N N 40 
PRD_002371 C14 H17 SING N N 41 
PRD_002371 C15 C16 SING N N 42 
PRD_002371 C15 H18 SING N N 43 
PRD_002371 C15 H19 SING N N 44 
PRD_002371 C16 H20 SING N N 45 
PRD_002371 C16 H21 SING N N 46 
PRD_002371 N6  H22 SING N N 47 
PRD_002371 N6  H23 SING N N 48 
PRD_002371 C5  N2  SING N N 49 
PRD_002371 C7  N5  SING N N 50 
PRD_002371 C13 N6  SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_002371 InChI            InChI                1.06  "InChI=1S/C16H22N6O4/c17-14(24)12-2-1-5-22(12)16(26)11(6-9-7-18-8-19-9)21-15(25)10-3-4-13(23)20-10/h7-8,10-12H,1-6H2,(H2,17,24)(H,18,19)(H,20,23)(H,21,25)/p+1/t10-,11-,12+/m0/s1" 
PRD_002371 InChIKey         InChI                1.06  XNSAINXGIQZQOO-SDDRHHMPSA-O                                                                                                                                                        
PRD_002371 SMILES_CANONICAL CACTVS               3.385 "NC(=O)[C@H]1CCCN1C(=O)[C@H](Cc2c[nH]c[nH+]2)NC(=O)[C@@H]3CCC(=O)N3"                                                                                                               
PRD_002371 SMILES           CACTVS               3.385 "NC(=O)[CH]1CCCN1C(=O)[CH](Cc2c[nH]c[nH+]2)NC(=O)[CH]3CCC(=O)N3"                                                                                                                   
PRD_002371 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c([nH+]c[nH]1)C[C@@H](C(=O)N2CCC[C@@H]2C(=O)N)NC(=O)[C@@H]3CCC(=O)N3"                                                                                                           
PRD_002371 SMILES           "OpenEye OEToolkits" 2.0.7 "c1c([nH+]c[nH]1)CC(C(=O)N2CCCC2C(=O)N)NC(=O)C3CCC(=O)N3"                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           PRD_002371 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-~{N}-[(2~{S})-1-[(2~{R})-2-aminocarbonylpyrrolidin-1-yl]-3-(1~{H}-imidazol-3-ium-4-yl)-1-oxidanylidene-propan-2-yl]-5-oxidanylidene-pyrrolidine-2-carboxamide" 
# 
