data_PRDCC_002391
# 
_chem_comp.id                                    PRD_002391 
_chem_comp.name                                  "covalently bound calpain inhibitor II" 
_chem_comp.formula                               "C19 H37 N3 O4 S" 
_chem_comp.formula_weight                        403.580 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_002391 C1  C1  C 0 1 N N N 11.511 5.228  23.477 -4.643 -0.292 -1.739 ACE 1 C    polymer 1 1 1  ? ? ? 
PRD_002391 O1  O1  O 0 1 N N N 11.285 5.095  24.669 -3.794 -1.145 -1.889 ACE 1 O    polymer 1 1 2  ? ? ? 
PRD_002391 C2  C2  C 0 1 N N N 12.486 6.347  22.972 -5.703 -0.091 -2.792 ACE 1 CH3  polymer 1 1 3  ? ? ? 
PRD_002391 N1  N1  N 0 1 N N N 10.879 4.357  22.590 -4.642 0.473  -0.629 LEU 2 N    polymer 1 1 4  ? ? ? 
PRD_002391 C3  C3  C 0 1 N N S 9.973  3.328  22.960 -3.615 0.273  0.396  LEU 2 CA   polymer 1 1 5  ? ? ? 
PRD_002391 C4  C4  C 0 1 N N N 10.388 1.997  22.233 -2.253 0.503  -0.206 LEU 2 C    polymer 1 1 6  ? ? ? 
PRD_002391 O2  O2  O 0 1 N N N 10.332 1.950  21.031 -2.103 0.444  -1.408 LEU 2 O    polymer 1 1 7  ? ? ? 
PRD_002391 C5  C5  C 0 1 N N N 8.568  3.815  22.449 -3.701 -1.157 0.933  LEU 2 CB   polymer 1 1 8  ? ? ? 
PRD_002391 C6  C6  C 0 1 N N N 7.236  3.148  22.942 -5.064 -1.373 1.593  LEU 2 CG   polymer 1 1 9  ? ? ? 
PRD_002391 C7  C7  C 0 1 N N N 6.167  2.971  21.813 -5.210 -2.843 1.993  LEU 2 CD1  polymer 1 1 10 ? ? ? 
PRD_002391 C8  C8  C 0 1 N N N 7.401  1.842  23.768 -5.172 -0.492 2.839  LEU 2 CD2  polymer 1 1 11 ? ? ? 
PRD_002391 N2  N2  N 0 1 N N N 10.772 0.897  22.900 -1.201 0.775  0.592  LEU 3 N    polymer 1 1 12 ? ? ? 
PRD_002391 C9  C9  C 0 1 N N S 11.067 -0.365 22.246 0.098  1.109  0.003  LEU 3 CA   polymer 1 1 13 ? ? ? 
PRD_002391 C10 C10 C 0 1 N N N 9.631  -0.934 21.903 1.198  0.707  0.951  LEU 3 C    polymer 1 1 14 ? ? ? 
PRD_002391 O3  O3  O 0 1 N N N 8.831  -1.163 22.793 0.964  0.585  2.135  LEU 3 O    polymer 1 1 15 ? ? ? 
PRD_002391 C11 C11 C 0 1 N N N 11.828 -1.280 23.111 0.171  2.615  -0.253 LEU 3 CB   polymer 1 1 16 ? ? ? 
PRD_002391 C12 C12 C 0 1 N N N 13.254 -0.847 23.329 1.514  2.959  -0.899 LEU 3 CG   polymer 1 1 17 ? ? ? 
PRD_002391 C13 C13 C 0 1 N N N 14.059 -1.778 24.222 1.585  2.333  -2.293 LEU 3 CD1  polymer 1 1 18 ? ? ? 
PRD_002391 C14 C14 C 0 1 N N N 13.989 -0.566 21.983 1.651  4.478  -1.015 LEU 3 CD2  polymer 1 1 19 ? ? ? 
PRD_002391 C15 C15 C 0 1 N N N 7.918  -3.129 19.686 4.130  1.170  2.115  UXS 4 C    polymer 1 1 20 ? ? ? 
PRD_002391 O4  O4  O 0 1 N N N 6.814  -3.558 19.453 4.809  2.000  1.170  UXS 4 O    polymer 1 1 21 ? ? ? 
PRD_002391 C16 C16 C 0 1 N N S 7.901  -1.668 20.179 3.486  -0.011 1.387  UXS 4 CA   polymer 1 1 22 ? ? ? 
PRD_002391 C17 C17 C 0 1 N N N 7.341  -0.868 18.963 4.550  -0.754 0.578  UXS 4 C04  polymer 1 1 23 ? ? ? 
PRD_002391 C18 C18 C 0 1 N N N 7.161  0.555  19.257 3.933  -2.005 -0.050 UXS 4 C05  polymer 1 1 24 ? ? ? 
PRD_002391 S1  S1  S 0 1 N N N 6.442  1.415  17.769 5.196  -2.886 -1.010 UXS 4 S06  polymer 1 1 25 ? ? ? 
PRD_002391 C19 C19 C 0 1 N N N 4.840  2.060  18.359 4.289  -4.314 -1.664 UXS 4 C07  polymer 1 1 26 ? ? ? 
PRD_002391 N3  N3  N 0 1 N N N 9.268  -1.195 20.591 2.442  0.482  0.484  UXS 4 N    polymer 1 1 27 ? ? ? 
PRD_002391 H1  H1  H 0 1 N N N 12.871 6.914  23.832 -6.561 -0.726 -2.569 ACE 1 H1   polymer 1 1 28 ? ? ? 
PRD_002391 H2  H2  H 0 1 N N N 13.325 5.885  22.432 -6.016 0.953  -2.798 ACE 1 H2   polymer 1 1 29 ? ? ? 
PRD_002391 H3  H3  H 0 1 N N N 11.945 7.027  22.297 -5.299 -0.355 -3.769 ACE 1 H3   polymer 1 1 30 ? ? ? 
PRD_002391 H4  H4  H 0 1 N N N 11.080 4.466  21.616 -5.321 1.155  -0.510 LEU 2 H    polymer 1 1 31 ? ? ? 
PRD_002391 H5  H5  H 0 1 N N N 9.944  3.169  24.048 -3.775 0.978  1.213  LEU 2 HA   polymer 1 1 32 ? ? ? 
PRD_002391 H6  H6  H 0 1 N N N 8.496  4.881  22.711 -3.580 -1.861 0.110  LEU 2 HB2  polymer 1 1 33 ? ? ? 
PRD_002391 H7  H7  H 0 1 N N N 8.582  3.706  21.354 -2.912 -1.317 1.667  LEU 2 HB3  polymer 1 1 34 ? ? ? 
PRD_002391 H8  H8  H 0 1 N N N 6.795  3.875  23.640 -5.854 -1.107 0.891  LEU 2 HG   polymer 1 1 35 ? ? ? 
PRD_002391 H9  H9  H 0 0 N N N 5.266  2.500  22.232 -6.142 -2.980 2.540  LEU 2 HD11 polymer 1 1 36 ? ? ? 
PRD_002391 H10 H10 H 0 0 N N N 5.906  3.956  21.397 -5.220 -3.464 1.097  LEU 2 HD12 polymer 1 1 37 ? ? ? 
PRD_002391 H11 H11 H 0 0 N N N 6.578  2.334  21.016 -4.371 -3.132 2.626  LEU 2 HD13 polymer 1 1 38 ? ? ? 
PRD_002391 H12 H12 H 0 0 N N N 6.410  1.464  24.059 -5.069 0.555  2.555  LEU 2 HD21 polymer 1 1 39 ? ? ? 
PRD_002391 H13 H13 H 0 0 N N N 7.917  1.086  23.159 -6.144 -0.646 3.310  LEU 2 HD22 polymer 1 1 40 ? ? ? 
PRD_002391 H14 H14 H 0 0 N N N 7.993  2.052  24.671 -4.382 -0.758 3.542  LEU 2 HD23 polymer 1 1 41 ? ? ? 
PRD_002391 H15 H15 H 0 1 N N N 10.859 0.949  23.895 -1.304 0.751  1.556  LEU 3 H    polymer 1 1 42 ? ? ? 
PRD_002391 H16 H16 H 0 1 N N N 11.611 -0.192 21.306 0.218  0.574  -0.939 LEU 3 HA   polymer 1 1 43 ? ? ? 
PRD_002391 H17 H17 H 0 1 N N N 11.326 -1.334 24.088 -0.639 2.910  -0.920 LEU 3 HB2  polymer 1 1 44 ? ? ? 
PRD_002391 H18 H18 H 0 1 N N N 11.833 -2.277 22.646 0.075  3.149  0.693  LEU 3 HB3  polymer 1 1 45 ? ? ? 
PRD_002391 H19 H19 H 0 1 N N N 13.209 0.119  23.853 2.324  2.568  -0.283 LEU 3 HG   polymer 1 1 46 ? ? ? 
PRD_002391 H20 H20 H 0 0 N N N 15.083 -1.390 24.328 2.566  2.523  -2.728 LEU 3 HD11 polymer 1 1 47 ? ? ? 
PRD_002391 H21 H21 H 0 0 N N N 13.585 -1.837 25.213 1.424  1.257  -2.217 LEU 3 HD12 polymer 1 1 48 ? ? ? 
PRD_002391 H22 H22 H 0 0 N N N 14.092 -2.781 23.771 0.815  2.771  -2.928 LEU 3 HD13 polymer 1 1 49 ? ? ? 
PRD_002391 H23 H23 H 0 0 N N N 15.024 -0.254 22.188 1.601  4.925  -0.022 LEU 3 HD21 polymer 1 1 50 ? ? ? 
PRD_002391 H24 H24 H 0 0 N N N 13.996 -1.480 21.372 2.608  4.723  -1.476 LEU 3 HD22 polymer 1 1 51 ? ? ? 
PRD_002391 H25 H25 H 0 0 N N N 13.465 0.234  21.440 0.841  4.870  -1.631 LEU 3 HD23 polymer 1 1 52 ? ? ? 
PRD_002391 H26 H26 H 0 1 N N N 6.880  -4.457 19.154 5.242  2.770  1.562  UXS 4 H1   polymer 1 1 53 ? ? ? 
PRD_002391 H27 H27 H 0 1 N N N 7.203  -1.576 21.024 3.044  -0.690 2.116  UXS 4 HA   polymer 1 1 54 ? ? ? 
PRD_002391 H28 H28 H 0 1 N N N 6.368  -1.295 18.679 4.929  -0.102 -0.209 UXS 4 H3   polymer 1 1 55 ? ? ? 
PRD_002391 H29 H29 H 0 1 N N N 8.044  -0.968 18.123 5.370  -1.043 1.235  UXS 4 H4   polymer 1 1 56 ? ? ? 
PRD_002391 H30 H30 H 0 1 N N N 8.134  1.004  19.504 3.555  -2.657 0.737  UXS 4 H5   polymer 1 1 57 ? ? ? 
PRD_002391 H31 H31 H 0 1 N N N 6.477  0.669  20.111 3.114  -1.715 -0.708 UXS 4 H6   polymer 1 1 58 ? ? ? 
PRD_002391 H32 H32 H 0 1 N N N 4.334  2.591  17.540 3.901  -4.908 -0.836 UXS 4 H7   polymer 1 1 59 ? ? ? 
PRD_002391 H33 H33 H 0 1 N N N 4.211  1.224  18.698 3.460  -3.967 -2.281 UXS 4 H8   polymer 1 1 60 ? ? ? 
PRD_002391 H34 H34 H 0 1 N N N 5.010  2.754  19.196 4.960  -4.925 -2.267 UXS 4 H9   polymer 1 1 61 ? ? ? 
PRD_002391 H35 H35 H 0 1 N N N 9.955  -1.061 19.877 2.647  0.647  -0.449 UXS 4 H2   polymer 1 1 62 ? ? ? 
PRD_002391 H36 H36 H 0 1 N N N 8.382  -3.756 20.462 4.844  0.798  2.850  UXS 4 H13  polymer 1 1 63 ? ? ? 
PRD_002391 H37 H37 H 0 1 N N N 8.517  -3.182 18.765 3.358  1.751  2.620  UXS 4 H14  polymer 1 1 64 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_002391 C1  O1  DOUB N N 1  
PRD_002391 C1  C2  SING N N 2  
PRD_002391 C2  H1  SING N N 3  
PRD_002391 C2  H2  SING N N 4  
PRD_002391 C2  H3  SING N N 5  
PRD_002391 N1  C3  SING N N 6  
PRD_002391 N1  H4  SING N N 7  
PRD_002391 C3  C4  SING N N 8  
PRD_002391 C3  C5  SING N N 9  
PRD_002391 C3  H5  SING N N 10 
PRD_002391 C4  O2  DOUB N N 11 
PRD_002391 C5  C6  SING N N 12 
PRD_002391 C5  H6  SING N N 13 
PRD_002391 C5  H7  SING N N 14 
PRD_002391 C6  C7  SING N N 15 
PRD_002391 C6  C8  SING N N 16 
PRD_002391 C6  H8  SING N N 17 
PRD_002391 C7  H9  SING N N 18 
PRD_002391 C7  H10 SING N N 19 
PRD_002391 C7  H11 SING N N 20 
PRD_002391 C8  H12 SING N N 21 
PRD_002391 C8  H13 SING N N 22 
PRD_002391 C8  H14 SING N N 23 
PRD_002391 N2  C9  SING N N 24 
PRD_002391 N2  H15 SING N N 25 
PRD_002391 C9  C10 SING N N 26 
PRD_002391 C9  C11 SING N N 27 
PRD_002391 C9  H16 SING N N 28 
PRD_002391 C10 O3  DOUB N N 29 
PRD_002391 C11 C12 SING N N 30 
PRD_002391 C11 H17 SING N N 31 
PRD_002391 C11 H18 SING N N 32 
PRD_002391 C12 C13 SING N N 33 
PRD_002391 C12 C14 SING N N 34 
PRD_002391 C12 H19 SING N N 35 
PRD_002391 C13 H20 SING N N 36 
PRD_002391 C13 H21 SING N N 37 
PRD_002391 C13 H22 SING N N 38 
PRD_002391 C14 H23 SING N N 39 
PRD_002391 C14 H24 SING N N 40 
PRD_002391 C14 H25 SING N N 41 
PRD_002391 S1  C19 SING N N 42 
PRD_002391 S1  C18 SING N N 43 
PRD_002391 C17 C18 SING N N 44 
PRD_002391 C17 C16 SING N N 45 
PRD_002391 O4  C15 SING N N 46 
PRD_002391 C15 C16 SING N N 47 
PRD_002391 C16 N3  SING N N 48 
PRD_002391 O4  H26 SING N N 49 
PRD_002391 C16 H27 SING N N 50 
PRD_002391 C17 H28 SING N N 51 
PRD_002391 C17 H29 SING N N 52 
PRD_002391 C18 H30 SING N N 53 
PRD_002391 C18 H31 SING N N 54 
PRD_002391 C19 H32 SING N N 55 
PRD_002391 C19 H33 SING N N 56 
PRD_002391 C19 H34 SING N N 57 
PRD_002391 N3  H35 SING N N 58 
PRD_002391 C15 H36 SING N N 59 
PRD_002391 C15 H37 SING N N 60 
PRD_002391 C1  N1  SING N N 61 
PRD_002391 C4  N2  SING N N 62 
PRD_002391 C10 N3  SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_002391 InChI            InChI                1.06  "InChI=1S/C19H37N3O4S/c1-12(2)9-16(20-14(5)24)19(26)22-17(10-13(3)4)18(25)21-15(11-23)7-8-27-6/h12-13,15-17,23H,7-11H2,1-6H3,(H,20,24)(H,21,25)(H,22,26)/t15-,16-,17-/m0/s1" 
PRD_002391 InChIKey         InChI                1.06  LDYZXCKXQNCXOP-ULQDDVLXSA-N                                                                                                                                                  
PRD_002391 SMILES_CANONICAL CACTVS               3.385 "CSCC[C@@H](CO)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(C)=O"                                                                                                                
PRD_002391 SMILES           CACTVS               3.385 "CSCC[CH](CO)NC(=O)[CH](CC(C)C)NC(=O)[CH](CC(C)C)NC(C)=O"                                                                                                                    
PRD_002391 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCSC)CO)NC(=O)C"                                                                                                              
PRD_002391 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC(C)C)C(=O)NC(CCSC)CO)NC(=O)C"                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           PRD_002391 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-acetamido-4-methyl-~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-4-methylsulfanyl-1-oxidanyl-butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]pentanamide" 
# 
