data_PRDCC_900112
# 
_chem_comp.id                                    PRD_900112 
_chem_comp.name                                  3-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C12 H22 O11" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        342.296 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900112 "C1'"  C7  C 0 1 N N S 21.135 -39.263 5.234  -2.411 1.666  -0.196 MAN 1 C1  polymer 1 1 1  ? ? ? 
PRD_900112 "C2'"  C8  C 0 1 N N S 20.704 -38.726 3.846  -1.036 1.060  0.100  MAN 1 C2  polymer 1 1 2  ? ? ? 
PRD_900112 "C3'"  C9  C 0 1 N N S 19.304 -38.077 3.983  -1.014 -0.395 -0.377 MAN 1 C3  polymer 1 1 3  ? ? ? 
PRD_900112 "C4'"  C10 C 0 1 N N R 18.325 -39.148 4.498  -2.147 -1.163 0.309  MAN 1 C4  polymer 1 1 4  ? ? ? 
PRD_900112 "C5'"  C11 C 0 1 N N R 18.833 -39.665 5.864  -3.479 -0.472 0.005  MAN 1 C5  polymer 1 1 5  ? ? ? 
PRD_900112 "C6'"  C12 C 0 1 N N N 17.868 -40.742 6.375  -4.610 -1.198 0.736  MAN 1 C6  polymer 1 1 6  ? ? ? 
PRD_900112 "O1'"  O6  O 0 1 N N N 21.223 -38.186 6.177  -2.636 1.669  -1.607 MAN 1 O1  polymer 1 1 7  ? ? ? 
PRD_900112 "O2'"  O7  O 0 1 N N N 20.636 -39.807 2.910  -0.787 1.105  1.506  MAN 1 O2  polymer 1 1 8  ? ? ? 
PRD_900112 "O3'"  O8  O 0 1 N N N 18.844 -37.596 2.705  0.240  -0.990 -0.039 MAN 1 O3  polymer 1 1 9  ? ? ? 
PRD_900112 "O4'"  O9  O 0 1 N N N 17.027 -38.563 4.642  -2.182 -2.504 -0.183 MAN 1 O4  polymer 1 1 10 ? ? ? 
PRD_900112 "O5'"  O10 O 0 1 N N N 20.164 -40.253 5.711  -3.421 0.886  0.446  MAN 1 O5  polymer 1 1 11 ? ? ? 
PRD_900112 "O6'"  O11 O 0 1 N N N 18.324 -41.229 7.641  -5.864 -0.626 0.361  MAN 1 O6  polymer 1 1 12 ? ? ? 
PRD_900112 C1     C1  C 0 1 N N R 19.217 -36.215 2.526  1.242  -0.849 -1.048 MAN 2 C1  polymer 1 1 13 ? ? ? 
PRD_900112 C2     C2  C 0 1 N N S 18.227 -35.564 1.523  2.448  -1.724 -0.698 MAN 2 C2  polymer 1 1 14 ? ? ? 
PRD_900112 C3     C3  C 0 1 N N S 18.342 -36.331 0.180  3.050  -1.243 0.626  MAN 2 C3  polymer 1 1 15 ? ? ? 
PRD_900112 C4     C4  C 0 1 N N S 19.793 -36.241 -0.319 3.425  0.236  0.496  MAN 2 C4  polymer 1 1 16 ? ? ? 
PRD_900112 C5     C5  C 0 1 N N R 20.727 -36.854 0.748  2.181  1.036  0.099  MAN 2 C5  polymer 1 1 17 ? ? ? 
PRD_900112 C6     C6  C 0 1 N N N 22.179 -36.740 0.264  2.560  2.506  -0.091 MAN 2 C6  polymer 1 1 18 ? ? ? 
PRD_900112 O2     O1  O 0 1 N N N 18.580 -34.186 1.334  3.428  -1.625 -1.733 MAN 2 O2  polymer 1 1 19 ? ? ? 
PRD_900112 O3     O2  O 0 1 N N N 17.455 -35.755 -0.791 4.220  -2.008 0.924  MAN 2 O3  polymer 1 1 20 ? ? ? 
PRD_900112 O4     O3  O 0 1 N N N 19.918 -36.965 -1.550 3.921  0.715  1.748  MAN 2 O4  polymer 1 1 21 ? ? ? 
PRD_900112 O5     O4  O 0 1 N N N 20.586 -36.131 2.010  1.653  0.518  -1.123 MAN 2 O5  polymer 1 1 22 ? ? ? 
PRD_900112 O6     O5  O 0 1 N N N 23.061 -37.296 1.239  1.381  3.272  -0.347 MAN 2 O6  polymer 1 1 23 ? ? ? 
PRD_900112 "H1'"  H12 H 0 1 N N N 22.119 -39.743 5.126  -2.446 2.688  0.180  MAN 1 H1  polymer 1 1 24 ? ? ? 
PRD_900112 "H2'"  H13 H 0 1 N N N 21.425 -37.965 3.513  -0.267 1.628  -0.424 MAN 1 H2  polymer 1 1 25 ? ? ? 
PRD_900112 "H3'"  H14 H 0 1 N N N 19.357 -37.254 4.711  -1.153 -0.426 -1.458 MAN 1 H3  polymer 1 1 26 ? ? ? 
PRD_900112 "H4'"  H15 H 0 1 N N N 18.297 -39.985 3.785  -1.980 -1.175 1.386  MAN 1 H4  polymer 1 1 27 ? ? ? 
PRD_900112 "H5'"  H16 H 0 1 N N N 18.862 -38.830 6.580  -3.665 -0.498 -1.069 MAN 1 H5  polymer 1 1 28 ? ? ? 
PRD_900112 "H6'"  H17 H 0 1 N N N 16.863 -40.310 6.489  -4.597 -2.254 0.467  MAN 1 H61 polymer 1 1 29 ? ? ? 
PRD_900112 "H6'A" H18 H 0 1 N N N 17.830 -41.572 5.655  -4.471 -1.096 1.813  MAN 1 H62 polymer 1 1 30 ? ? ? 
PRD_900112 "HO1'" H19 H 0 1 N N N 21.852 -37.545 5.868  -3.490 2.039  -1.868 MAN 1 HO1 polymer 1 1 31 ? ? ? 
PRD_900112 "HO2'" H20 H 0 1 N N N 20.372 -39.475 2.060  -0.791 1.998  1.878  MAN 1 HO2 polymer 1 1 32 ? ? ? 
PRD_900112 "HO4'" H21 H 0 1 N N N 16.417 -39.219 4.960  -2.878 -3.049 0.209  MAN 1 HO4 polymer 1 1 33 ? ? ? 
PRD_900112 "HO6'" H22 H 0 1 N N N 17.727 -41.896 7.958  -6.628 -1.039 0.788  MAN 1 HO6 polymer 1 1 34 ? ? ? 
PRD_900112 H1     H1  H 0 1 N N N 19.148 -35.679 3.484  0.835  -1.159 -2.011 MAN 2 H1  polymer 1 1 35 ? ? ? 
PRD_900112 H2     H2  H 0 1 N N N 17.202 -35.658 1.910  2.128  -2.761 -0.596 MAN 2 H2  polymer 1 1 36 ? ? ? 
PRD_900112 H3     H3  H 0 1 N N N 18.088 -37.387 0.352  2.320  -1.367 1.426  MAN 2 H3  polymer 1 1 37 ? ? ? 
PRD_900112 H4     H4  H 0 1 N N N 20.059 -35.184 -0.464 4.193  0.352  -0.269 MAN 2 H4  polymer 1 1 38 ? ? ? 
PRD_900112 H5     H5  H 0 1 N N N 20.472 -37.915 0.885  1.430  0.953  0.884  MAN 2 H5  polymer 1 1 39 ? ? ? 
PRD_900112 H6     H6  H 0 1 N N N 22.292 -37.287 -0.684 3.045  2.877  0.812  MAN 2 H61 polymer 1 1 40 ? ? ? 
PRD_900112 H6A    H7  H 0 1 N N N 22.429 -35.680 0.108  3.244  2.599  -0.935 MAN 2 H62 polymer 1 1 41 ? ? ? 
PRD_900112 HO2    H8  H 0 1 N N N 17.976 -33.785 0.720  3.112  -1.909 -2.602 MAN 2 HO2 polymer 1 1 42 ? ? ? 
PRD_900112 HO3    H9  H 0 1 N N N 17.531 -36.229 -1.611 4.057  -2.957 1.014  MAN 2 HO3 polymer 1 1 43 ? ? ? 
PRD_900112 HO4    H10 H 0 1 N N N 20.814 -36.911 -1.860 4.707  0.249  2.063  MAN 2 HO4 polymer 1 1 44 ? ? ? 
PRD_900112 HO6    H11 H 0 1 N N N 23.958 -37.223 0.934  1.546  4.216  -0.478 MAN 2 HO6 polymer 1 1 45 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900112 C1    "O3'"  SING N N 1  
PRD_900112 C1    C2     SING N N 2  
PRD_900112 C1    O5     SING N N 3  
PRD_900112 C2    C3     SING N N 4  
PRD_900112 C2    O2     SING N N 5  
PRD_900112 C3    O3     SING N N 6  
PRD_900112 C3    C4     SING N N 7  
PRD_900112 C4    O4     SING N N 8  
PRD_900112 C4    C5     SING N N 9  
PRD_900112 C5    C6     SING N N 10 
PRD_900112 C5    O5     SING N N 11 
PRD_900112 C6    O6     SING N N 12 
PRD_900112 "C1'" "O5'"  SING N N 13 
PRD_900112 "C1'" "C2'"  SING N N 14 
PRD_900112 "C1'" "O1'"  SING N N 15 
PRD_900112 "C2'" "O2'"  SING N N 16 
PRD_900112 "C2'" "C3'"  SING N N 17 
PRD_900112 "C3'" "O3'"  SING N N 18 
PRD_900112 "C3'" "C4'"  SING N N 19 
PRD_900112 "C4'" "O4'"  SING N N 20 
PRD_900112 "C4'" "C5'"  SING N N 21 
PRD_900112 "C5'" "O5'"  SING N N 22 
PRD_900112 "C5'" "C6'"  SING N N 23 
PRD_900112 "C6'" "O6'"  SING N N 24 
PRD_900112 C1    H1     SING N N 25 
PRD_900112 C2    H2     SING N N 26 
PRD_900112 C3    H3     SING N N 27 
PRD_900112 C4    H4     SING N N 28 
PRD_900112 C5    H5     SING N N 29 
PRD_900112 C6    H6     SING N N 30 
PRD_900112 C6    H6A    SING N N 31 
PRD_900112 O2    HO2    SING N N 32 
PRD_900112 O3    HO3    SING N N 33 
PRD_900112 O4    HO4    SING N N 34 
PRD_900112 O6    HO6    SING N N 35 
PRD_900112 "C1'" "H1'"  SING N N 36 
PRD_900112 "C2'" "H2'"  SING N N 37 
PRD_900112 "C3'" "H3'"  SING N N 38 
PRD_900112 "C4'" "H4'"  SING N N 39 
PRD_900112 "C5'" "H5'"  SING N N 40 
PRD_900112 "C6'" "H6'"  SING N N 41 
PRD_900112 "C6'" "H6'A" SING N N 42 
PRD_900112 "O1'" "HO1'" SING N N 43 
PRD_900112 "O2'" "HO2'" SING N N 44 
PRD_900112 "O4'" "HO4'" SING N N 45 
PRD_900112 "O6'" "HO6'" SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900112 InChI            InChI                1.06  "InChI=1S/C12H22O11/c13-1-3-5(15)7(17)8(18)12(22-3)23-10-6(16)4(2-14)21-11(20)9(10)19/h3-20H,1-2H2/t3-,4-,5-,6-,7+,8+,9+,10+,11+,12-/m1/s1" 
PRD_900112 InChIKey         InChI                1.06  QIGJYVCQYDKYDW-LBGGPIGOSA-N                                                                                                                 
PRD_900112 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H](O[C@@H]2[C@H](O)[C@@H](O)O[C@H](CO)[C@H]2O)[C@@H](O)[C@@H](O)[C@@H]1O"                                                      
PRD_900112 SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)O[CH](CO)[CH]2O)[CH](O)[CH](O)[CH]1O"                                                                     
PRD_900112 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O[C@@H]2[C@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O"                                                
PRD_900112 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O"                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           PRD_900112 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        
;(2~{S},3~{S},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxida
 nyl)oxan-2-yl]oxy-oxane-2,3,5-triol
;
# 
