data_PRDCC_900064
# 
_chem_comp.id                                    PRD_900064 
_chem_comp.name                                  2-FLUORO-2-DEOXY-LACTOSE 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C12 H21 F O10" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        344.288 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900064 "C2'"  C8  C 0 1 N N R 20.952 145.046 1.511  2.804  -1.512 -0.087 BGC 1 C2   polymer 1 1 1  ? ? ? 
PRD_900064 "C3'"  C9  C 0 1 N N R 20.643 145.593 2.920  1.498  -0.908 -0.613 BGC 1 C3   polymer 1 1 2  ? ? ? 
PRD_900064 "C4'"  C10 C 0 1 N N S 20.801 144.495 3.981  1.248  0.430  0.090  BGC 1 C4   polymer 1 1 3  ? ? ? 
PRD_900064 "C5'"  C11 C 0 1 N N R 22.101 143.713 3.820  2.448  1.351  -0.141 BGC 1 C5   polymer 1 1 4  ? ? ? 
PRD_900064 "C6'"  C12 C 0 1 N N N 22.133 142.477 4.655  2.233  2.668  0.608  BGC 1 C6   polymer 1 1 5  ? ? ? 
PRD_900064 "C1'"  C7  C 0 1 N N R 22.287 144.308 1.517  3.945  -0.516 -0.311 BGC 1 C1   polymer 1 1 6  ? ? ? 
PRD_900064 "O1'"  O6  O 0 1 N N N 22.464 143.727 0.272  5.156  -1.049 0.228  BGC 1 O1   polymer 1 1 7  ? ? ? 
PRD_900064 "O2'"  O7  O 0 1 N N N 20.934 146.119 0.600  3.085  -2.725 -0.788 BGC 1 O2   polymer 1 1 8  ? ? ? 
PRD_900064 "O3'"  O8  O 0 1 N N N 19.347 146.139 2.923  0.416  -1.800 -0.342 BGC 1 O3   polymer 1 1 9  ? ? ? 
PRD_900064 O1     O1  O 0 1 N N N 20.802 145.149 5.288  0.070  1.037  -0.445 BGC 1 O4   polymer 1 1 10 ? ? ? 
PRD_900064 "O5'"  O9  O 0 1 N N N 22.248 143.251 2.472  3.634  0.717  0.343  BGC 1 O5   polymer 1 1 11 ? ? ? 
PRD_900064 "O6'"  O10 O 0 1 N N N 23.111 142.596 5.672  3.296  3.571  0.299  BGC 1 O6   polymer 1 1 12 ? ? ? 
PRD_900064 C1     C1  C 0 1 N N S 19.560 145.325 5.932  -1.132 0.676  0.238  2FG 2 C1   polymer 1 1 13 ? ? ? 
PRD_900064 C2     C2  C 0 1 N N R 19.875 145.580 7.378  -2.305 1.475  -0.335 2FG 2 C2   polymer 1 1 14 ? ? ? 
PRD_900064 F2     F1  F 0 1 N N N 20.550 144.451 7.843  -2.093 2.840  -0.115 2FG 2 F2   polymer 1 1 15 ? ? ? 
PRD_900064 C3     C3  C 0 1 N N S 18.672 145.961 8.232  -3.598 1.039  0.361  2FG 2 C3   polymer 1 1 16 ? ? ? 
PRD_900064 O3     O2  O 0 1 N N N 19.061 146.179 9.602  -4.708 1.727  -0.219 2FG 2 O3   polymer 1 1 17 ? ? ? 
PRD_900064 C4     C4  C 0 1 N N R 18.102 147.210 7.593  -3.779 -0.471 0.178  2FG 2 C4   polymer 1 1 18 ? ? ? 
PRD_900064 O4     O3  O 0 1 N N N 19.078 148.256 7.691  -3.924 -0.770 -1.212 2FG 2 O4   polymer 1 1 19 ? ? ? 
PRD_900064 C5     C5  C 0 1 N N R 17.769 146.894 6.114  -2.549 -1.195 0.731  2FG 2 C5   polymer 1 1 20 ? ? ? 
PRD_900064 O5     O4  O 0 1 N N N 18.933 146.449 5.371  -1.378 -0.721 0.063  2FG 2 O5   polymer 1 1 21 ? ? ? 
PRD_900064 C6     C6  C 0 1 N N N 17.168 148.075 5.415  -2.695 -2.700 0.498  2FG 2 C6   polymer 1 1 22 ? ? ? 
PRD_900064 O6     O5  O 0 1 N N N 15.830 148.267 5.824  -1.605 -3.386 1.117  2FG 2 O6   polymer 1 1 23 ? ? ? 
PRD_900064 "H2'"  H12 H 0 1 N N N 20.164 144.325 1.249  2.706  -1.720 0.978  BGC 1 H2   polymer 1 1 24 ? ? ? 
PRD_900064 "H3'"  H13 H 0 1 N N N 21.376 146.383 3.141  1.578  -0.747 -1.688 BGC 1 H3   polymer 1 1 25 ? ? ? 
PRD_900064 "H4'"  H14 H 0 1 N N N 19.951 143.801 3.908  1.117  0.261  1.159  BGC 1 H4   polymer 1 1 26 ? ? ? 
PRD_900064 "H5'"  H15 H 0 1 N N N 22.945 144.362 4.095  2.553  1.552  -1.207 BGC 1 H5   polymer 1 1 27 ? ? ? 
PRD_900064 "H6'1" H16 H 0 1 N N N 21.146 142.325 5.117  1.283  3.107  0.303  BGC 1 H6C1 polymer 1 1 28 ? ? ? 
PRD_900064 "H6'2" H17 H 0 1 N N N 22.376 141.614 4.017  2.218  2.477  1.681  BGC 1 H6C2 polymer 1 1 29 ? ? ? 
PRD_900064 "H1'"  H11 H 0 1 N N N 23.096 145.016 1.750  4.069  -0.339 -1.380 BGC 1 H1   polymer 1 1 30 ? ? ? 
PRD_900064 "HO1'" H18 H 0 1 N N N 23.292 143.261 0.254  5.922  -0.469 0.122  BGC 1 HA   polymer 1 1 31 ? ? ? 
PRD_900064 "HO2'" H19 H 0 1 N N N 20.086 146.547 0.631  3.903  -3.160 -0.509 BGC 1 HB   polymer 1 1 32 ? ? ? 
PRD_900064 "HO3'" H20 H 0 1 N N N 19.148 146.479 3.788  0.512  -2.671 -0.751 BGC 1 HC   polymer 1 1 33 ? ? ? 
PRD_900064 "HO6'" H21 H 0 1 N N N 23.122 141.804 6.196  3.224  4.429  0.740  BGC 1 H6   polymer 1 1 34 ? ? ? 
PRD_900064 H1     H1  H 0 1 N N N 18.931 144.427 5.838  -1.026 0.896  1.300  2FG 2 H1   polymer 1 1 35 ? ? ? 
PRD_900064 H2     H2  H 0 1 N N N 20.568 146.434 7.409  -2.385 1.287  -1.406 2FG 2 H2   polymer 1 1 36 ? ? ? 
PRD_900064 H3     H3  H 0 1 N N N 17.925 145.156 8.175  -3.538 1.274  1.423  2FG 2 H3   polymer 1 1 37 ? ? ? 
PRD_900064 HO3    H8  H 0 1 N N N 18.297 146.415 10.115 -4.656 2.690  -0.146 2FG 2 HO3  polymer 1 1 38 ? ? ? 
PRD_900064 H4     H4  H 0 1 N N N 17.176 147.497 8.114  -4.668 -0.799 0.716  2FG 2 H4   polymer 1 1 39 ? ? ? 
PRD_900064 HO4    H9  H 0 1 N N N 19.265 148.431 8.606  -4.682 -0.340 -1.630 2FG 2 HO4  polymer 1 1 40 ? ? ? 
PRD_900064 H5     H5  H 0 1 N N N 17.024 146.085 6.112  -2.462 -0.999 1.800  2FG 2 H5   polymer 1 1 41 ? ? ? 
PRD_900064 H61    H6  H 0 1 N N N 17.193 147.903 4.329  -3.634 -3.046 0.932  2FG 2 H6   polymer 1 1 42 ? ? ? 
PRD_900064 H62    H7  H 0 1 N N N 17.753 148.975 5.657  -2.692 -2.904 -0.572 2FG 2 H6A  polymer 1 1 43 ? ? ? 
PRD_900064 HO6    H10 H 0 1 N N N 15.465 149.019 5.372  -1.632 -4.347 1.009  2FG 2 HO6  polymer 1 1 44 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900064 "O1'" "C1'"  SING N N 1  
PRD_900064 "O2'" "C2'"  SING N N 2  
PRD_900064 "C2'" "C1'"  SING N N 3  
PRD_900064 "C2'" "C3'"  SING N N 4  
PRD_900064 "C1'" "O5'"  SING N N 5  
PRD_900064 "O5'" "C5'"  SING N N 6  
PRD_900064 "C3'" "O3'"  SING N N 7  
PRD_900064 "C3'" "C4'"  SING N N 8  
PRD_900064 "C5'" "C4'"  SING N N 9  
PRD_900064 "C5'" "C6'"  SING N N 10 
PRD_900064 "C4'" O1     SING N N 11 
PRD_900064 "C6'" "O6'"  SING N N 12 
PRD_900064 O1    C1     SING N N 13 
PRD_900064 O5    C1     SING N N 14 
PRD_900064 O5    C5     SING N N 15 
PRD_900064 C6    O6     SING N N 16 
PRD_900064 C6    C5     SING N N 17 
PRD_900064 C1    C2     SING N N 18 
PRD_900064 C5    C4     SING N N 19 
PRD_900064 C2    F2     SING N N 20 
PRD_900064 C2    C3     SING N N 21 
PRD_900064 C4    O4     SING N N 22 
PRD_900064 C4    C3     SING N N 23 
PRD_900064 C3    O3     SING N N 24 
PRD_900064 C1    H1     SING N N 25 
PRD_900064 C2    H2     SING N N 26 
PRD_900064 C3    H3     SING N N 27 
PRD_900064 C4    H4     SING N N 28 
PRD_900064 C5    H5     SING N N 29 
PRD_900064 C6    H61    SING N N 30 
PRD_900064 C6    H62    SING N N 31 
PRD_900064 O3    HO3    SING N N 32 
PRD_900064 O4    HO4    SING N N 33 
PRD_900064 O6    HO6    SING N N 34 
PRD_900064 "C1'" "H1'"  SING N N 35 
PRD_900064 "C2'" "H2'"  SING N N 36 
PRD_900064 "C3'" "H3'"  SING N N 37 
PRD_900064 "C4'" "H4'"  SING N N 38 
PRD_900064 "C5'" "H5'"  SING N N 39 
PRD_900064 "C6'" "H6'1" SING N N 40 
PRD_900064 "C6'" "H6'2" SING N N 41 
PRD_900064 "O1'" "HO1'" SING N N 42 
PRD_900064 "O2'" "HO2'" SING N N 43 
PRD_900064 "O3'" "HO3'" SING N N 44 
PRD_900064 "O6'" "HO6'" SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900064 SMILES           ACDLabs              12.01 "C1(C(F)C(O)C(O)C(CO)O1)OC2C(C(C(OC2CO)O)O)O"                                                                                                        
PRD_900064 InChI            InChI                1.03  
;InChI=1S/C12H21FO10/c13-5-7(17)6(16)3(1-14)22-12(5)23-10-4(2-15)21-11(20)9(19)8(10)18/h3-12,14-20H,1-2H2/t3-,4-,5-,6+,7
 -,8-,9-,10-,11-,12+/m1/s1
;
PRD_900064 InChIKey         InChI                1.03  KWMZPXRIEZDXAQ-QRZGKKJRSA-N                                                                                                                          
PRD_900064 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](F)[C@@H](O)[C@H]1O"                                                                
PRD_900064 SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO)[CH](F)[CH](O)[CH]1O"                                                                              
PRD_900064 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O)O)CO)F)O)O)O"                                                          
PRD_900064 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)O)O)CO)F)O)O)O"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_900064 "SYSTEMATIC NAME" ACDLabs              12.01 "4-O-(2-deoxy-2-fluoro-beta-D-galactopyranosyl)-beta-D-glucopyranose"                                                                                                  
PRD_900064 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 
;(2~{R},3~{R},4~{R},5~{S},6~{R})-5-[(2~{S},3~{R},4~{S},5~{R},6~{R})-3-fluoranyl-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-
 2-yl]oxy-6-(hydroxymethyl)oxane-2,3,4-triol
;
# 
