data_PRDCC_900096
# 
_chem_comp.id                                    PRD_900096 
_chem_comp.name                                  "4-S-(6-O-phosphono-alpha-L-idopyranosyl)-4-thio-beta-D-glucopyranose" 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C12 H23 O13 P S" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        438.342 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900096 CAQ C10 C 0 1 N N R 22.306 -5.585 16.101 3.073  0.375  -0.237 SGC 1 C1  polymer 1 1 1  ? ? ? 
PRD_900096 OAB O11 O 0 1 N N N 22.269 -6.526 15.144 4.461  0.087  -0.420 SGC 1 O1  polymer 1 1 2  ? ? ? 
PRD_900096 CAT C9  C 0 1 N N R 23.044 -6.133 17.293 2.830  0.817  1.208  SGC 1 C2  polymer 1 1 3  ? ? ? 
PRD_900096 OAC O10 O 0 1 N N N 22.288 -7.250 17.851 3.164  -0.251 2.097  SGC 1 O2  polymer 1 1 4  ? ? ? 
PRD_900096 CAX C8  C 0 1 N N R 23.268 -5.158 18.277 1.352  1.182  1.380  SGC 1 C3  polymer 1 1 5  ? ? ? 
PRD_900096 OAG O9  O 0 1 N N N 24.121 -5.713 19.313 1.130  1.666  2.707  SGC 1 O3  polymer 1 1 6  ? ? ? 
PRD_900096 CAZ C7  C 0 1 N N S 23.904 -3.924 17.756 0.986  2.274  0.370  SGC 1 C4  polymer 1 1 7  ? ? ? 
PRD_900096 CAR C11 C 0 1 N N R 23.214 -3.381 16.527 1.301  1.776  -1.043 SGC 1 C5  polymer 1 1 8  ? ? ? 
PRD_900096 OAN O12 O 0 1 N N N 22.932 -4.363 15.567 2.684  1.424  -1.126 SGC 1 O5  polymer 1 1 9  ? ? ? 
PRD_900096 CAK C12 C 0 1 N N N 24.088 -2.321 15.870 0.995  2.883  -2.054 SGC 1 C6  polymer 1 1 10 ? ? ? 
PRD_900096 OAA O13 O 0 1 N N N 23.478 -1.229 15.270 1.177  2.381  -3.380 SGC 1 O6  polymer 1 1 11 ? ? ? 
PRD_900096 SAP S1  S 0 1 N N N 23.950 -2.686 19.105 -0.783 2.651  0.499  SGC 1 S4  polymer 1 1 12 ? ? ? 
PRD_900096 OAH O1  O 0 1 N N N 28.811 -1.698 15.176 1.035  -2.584 1.506  RTG 2 OAH polymer 1 1 13 ? ? ? 
PRD_900096 PBA P1  P 0 1 N N N 28.684 -0.192 15.129 1.079  -2.858 0.052  RTG 2 PBA polymer 1 1 14 ? ? ? 
PRD_900096 OAI O2  O 0 1 N N N 28.786 0.265  13.687 2.578  -2.632 -0.490 RTG 2 OAI polymer 1 1 15 ? ? ? 
PRD_900096 OAJ O3  O 0 1 N N N 29.791 0.414  15.958 0.633  -4.380 -0.221 RTG 2 OAJ polymer 1 1 16 ? ? ? 
PRD_900096 O6  O4  O 0 1 N N N 27.290 0.271  15.707 0.075  -1.859 -0.713 RTG 2 O6  polymer 1 1 17 ? ? ? 
PRD_900096 C6  C1  C 0 1 N N N 27.073 0.199  17.063 -1.310 -1.743 -0.382 RTG 2 C6  polymer 1 1 18 ? ? ? 
PRD_900096 C5  C2  C 0 1 N N S 27.323 -1.153 17.689 -1.969 -0.710 -1.299 RTG 2 C5  polymer 1 1 19 ? ? ? 
PRD_900096 O5  O5  O 0 1 N N N 26.120 -1.855 17.817 -1.410 0.580  -1.043 RTG 2 O5  polymer 1 1 20 ? ? ? 
PRD_900096 C4  C3  C 0 1 N N S 28.172 -1.006 18.959 -3.475 -0.675 -1.028 RTG 2 C4  polymer 1 1 21 ? ? ? 
PRD_900096 O4  O6  O 0 1 N N N 28.938 0.194  18.841 -4.027 -1.978 -1.228 RTG 2 O4  polymer 1 1 22 ? ? ? 
PRD_900096 C3  C4  C 0 1 N N S 27.490 -1.042 20.200 -3.716 -0.233 0.418  RTG 2 C3  polymer 1 1 23 ? ? ? 
PRD_900096 O3  O7  O 0 1 N N N 28.484 -1.487 21.235 -5.121 -0.126 0.658  RTG 2 O3  polymer 1 1 24 ? ? ? 
PRD_900096 C2  C5  C 0 1 N N R 26.356 -1.898 20.219 -3.053 1.130  0.641  RTG 2 C2  polymer 1 1 25 ? ? ? 
PRD_900096 O2  O8  O 0 1 N N N 25.592 -1.753 21.431 -3.209 1.519  2.007  RTG 2 O2  polymer 1 1 26 ? ? ? 
PRD_900096 C1  C6  C 0 1 N N S 25.438 -1.663 19.029 -1.563 1.025  0.306  RTG 2 C1  polymer 1 1 27 ? ? ? 
PRD_900096 H18 H18 H 0 1 N N N 21.285 -5.335 16.424 2.485  -0.518 -0.448 SGC 1 H1  polymer 1 1 28 ? ? ? 
PRD_900096 H19 H19 H 0 1 N N N 21.805 -6.190 14.386 4.688  -0.200 -1.315 SGC 1 H1O polymer 1 1 29 ? ? ? 
PRD_900096 H16 H16 H 0 1 N N N 24.013 -6.515 16.940 3.448  1.686  1.434  SGC 1 H2  polymer 1 1 30 ? ? ? 
PRD_900096 H17 H17 H 0 1 N N N 22.143 -7.903 17.176 4.087  -0.535 2.041  SGC 1 H2O polymer 1 1 31 ? ? ? 
PRD_900096 H14 H14 H 0 1 N N N 22.306 -4.879 18.732 0.736  0.301  1.204  SGC 1 H3  polymer 1 1 32 ? ? ? 
PRD_900096 H15 H15 H 0 1 N N N 23.727 -6.506 19.658 1.342  1.025  3.399  SGC 1 H3O polymer 1 1 33 ? ? ? 
PRD_900096 H13 H13 H 0 1 N N N 24.956 -4.132 17.512 1.567  3.173  0.577  SGC 1 H4  polymer 1 1 34 ? ? ? 
PRD_900096 H20 H20 H 0 1 N N N 22.278 -2.899 16.846 0.690  0.901  -1.265 SGC 1 H5  polymer 1 1 35 ? ? ? 
PRD_900096 H22 H22 H 0 1 N N N 24.681 -2.827 15.094 1.668  3.723  -1.888 SGC 1 H62 polymer 1 1 36 ? ? ? 
PRD_900096 H21 H21 H 0 1 N N N 24.760 -1.929 16.648 -0.036 3.213  -1.930 SGC 1 H61 polymer 1 1 37 ? ? ? 
PRD_900096 H23 H23 H 0 1 N N N 24.142 -0.656 14.905 1.000  3.030  -4.074 SGC 1 H6  polymer 1 1 38 ? ? ? 
PRD_900096 H1  H1  H 0 1 N N N 28.907 -0.490 13.123 3.238  -3.202 -0.072 RTG 2 H6  polymer 1 1 39 ? ? ? 
PRD_900096 H2  H2  H 0 1 N N N 30.326 -0.279 16.328 0.639  -4.630 -1.155 RTG 2 H7  polymer 1 1 40 ? ? ? 
PRD_900096 H3  H3  H 0 1 N N N 27.737 0.927  17.552 -1.797 -2.709 -0.514 RTG 2 H61 polymer 1 1 41 ? ? ? 
PRD_900096 H4  H4  H 0 1 N N N 26.025 0.473  17.254 -1.410 -1.424 0.655  RTG 2 H62 polymer 1 1 42 ? ? ? 
PRD_900096 H5  H5  H 0 1 N N N 27.950 -1.706 16.974 -1.792 -0.983 -2.339 RTG 2 H5  polymer 1 1 43 ? ? ? 
PRD_900096 H6  H6  H 0 1 N N N 28.881 -1.847 18.949 -3.951 0.031  -1.710 RTG 2 H4  polymer 1 1 44 ? ? ? 
PRD_900096 H7  H7  H 0 1 N N N 29.473 0.306  19.618 -4.980 -2.029 -1.073 RTG 2 HO4 polymer 1 1 45 ? ? ? 
PRD_900096 H8  H8  H 0 1 N N N 27.169 -0.022 20.459 -3.283 -0.965 1.100  RTG 2 H3  polymer 1 1 46 ? ? ? 
PRD_900096 H9  H9  H 0 1 N N N 28.062 -1.524 22.085 -5.346 0.151  1.557  RTG 2 HO3 polymer 1 1 47 ? ? ? 
PRD_900096 H10 H10 H 0 1 N N N 26.706 -2.939 20.158 -3.520 1.873  -0.005 RTG 2 H2  polymer 1 1 48 ? ? ? 
PRD_900096 H11 H11 H 0 1 N N N 24.845 -2.339 21.407 -2.812 2.375  2.220  RTG 2 HO2 polymer 1 1 49 ? ? ? 
PRD_900096 H12 H12 H 0 1 N N N 25.073 -0.627 19.083 -1.088 0.312  0.980  RTG 2 H1  polymer 1 1 50 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900096 OAH PBA DOUB N N 1  
PRD_900096 PBA OAI SING N N 2  
PRD_900096 PBA O6  SING N N 3  
PRD_900096 PBA OAJ SING N N 4  
PRD_900096 O6  C6  SING N N 5  
PRD_900096 C6  C5  SING N N 6  
PRD_900096 C5  O5  SING N N 7  
PRD_900096 C5  C4  SING N N 8  
PRD_900096 O5  C1  SING N N 9  
PRD_900096 C4  O4  SING N N 10 
PRD_900096 C4  C3  SING N N 11 
PRD_900096 C3  C2  SING N N 12 
PRD_900096 C3  O3  SING N N 13 
PRD_900096 C2  C1  SING N N 14 
PRD_900096 C2  O2  SING N N 15 
PRD_900096 C1  SAP SING N N 16 
PRD_900096 SAP CAZ SING N N 17 
PRD_900096 CAZ CAR SING N N 18 
PRD_900096 CAZ CAX SING N N 19 
PRD_900096 CAX CAT SING N N 20 
PRD_900096 CAX OAG SING N N 21 
PRD_900096 CAT OAC SING N N 22 
PRD_900096 CAT CAQ SING N N 23 
PRD_900096 CAQ OAB SING N N 24 
PRD_900096 CAQ OAN SING N N 25 
PRD_900096 OAN CAR SING N N 26 
PRD_900096 CAR CAK SING N N 27 
PRD_900096 CAK OAA SING N N 28 
PRD_900096 OAI H1  SING N N 29 
PRD_900096 OAJ H2  SING N N 30 
PRD_900096 C6  H3  SING N N 31 
PRD_900096 C6  H4  SING N N 32 
PRD_900096 C5  H5  SING N N 33 
PRD_900096 C4  H6  SING N N 34 
PRD_900096 O4  H7  SING N N 35 
PRD_900096 C3  H8  SING N N 36 
PRD_900096 O3  H9  SING N N 37 
PRD_900096 C2  H10 SING N N 38 
PRD_900096 O2  H11 SING N N 39 
PRD_900096 C1  H12 SING N N 40 
PRD_900096 CAZ H13 SING N N 41 
PRD_900096 CAX H14 SING N N 42 
PRD_900096 OAG H15 SING N N 43 
PRD_900096 CAT H16 SING N N 44 
PRD_900096 OAC H17 SING N N 45 
PRD_900096 CAQ H18 SING N N 46 
PRD_900096 OAB H19 SING N N 47 
PRD_900096 CAR H20 SING N N 48 
PRD_900096 CAK H21 SING N N 49 
PRD_900096 CAK H22 SING N N 50 
PRD_900096 OAA H23 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900096 InChI            InChI                1.06  "InChI=1S/C12H23O13PS/c13-1-3-10(7(16)8(17)11(19)24-3)27-12-9(18)6(15)5(14)4(25-12)2-23-26(20,21)22/h3-19H,1-2H2,(H2,20,21,22)/t3-,4+,5-,6+,7-,8-,9-,10-,11-,12+/m1/s1" 
PRD_900096 InChIKey         InChI                1.06  XGJJBBUPFWZKFA-GABYZZBISA-N                                                                                                                                             
PRD_900096 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1S[C@@H]2O[C@@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]2O"                                                                      
PRD_900096 SMILES           CACTVS               3.385 "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1S[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]2O"                                                                                      
PRD_900096 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)S[C@H]2[C@@H]([C@H]([C@@H]([C@@H](O2)COP(=O)(O)O)O)O)O)O"                                                                  
PRD_900096 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)SC2C(C(C(C(O2)COP(=O)(O)O)O)O)O)O"                                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           PRD_900096 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        
;[(2~{S},3~{S},4~{S},5~{R},6~{S})-6-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl]sul
 fanyl-3,4,5-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate
;
# 
