data_PRDCC_900116
# 
_chem_comp.id                                    PRD_900116 
_chem_comp.name                                  4-O-beta-D-xylopyranosyl-beta-D-xylopyranose 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C10 H18 O9" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        282.245 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900116 O1A  O9  O 0 1 N N N 62.369 63.326 22.057 -5.145 -0.343 1.296  XYP 1 O4A  polymer 1 1 1  ? ? ? 
PRD_900116 C1A  C9  C 0 1 N N R 62.245 64.245 21.048 -3.966 -0.610 0.535  XYP 1 C1B  polymer 1 1 2  ? ? ? 
PRD_900116 C2A  C10 C 0 1 N N R 63.637 64.692 20.579 -3.534 0.662  -0.201 XYP 1 C2B  polymer 1 1 3  ? ? ? 
PRD_900116 C3A  C7  C 0 1 N N R 63.577 65.572 19.393 -2.237 0.384  -0.966 XYP 1 C3B  polymer 1 1 4  ? ? ? 
PRD_900116 C4A  C6  C 0 1 N N R 62.774 65.007 18.298 -1.171 -0.108 0.019  XYP 1 C4B  polymer 1 1 5  ? ? ? 
PRD_900116 C5A  C8  C 0 1 N N N 61.391 64.538 18.774 -1.694 -1.350 0.746  XYP 1 C5B  polymer 1 1 6  ? ? ? 
PRD_900116 O2A  O8  O 0 1 N N N 64.259 65.423 21.647 -4.556 1.052  -1.120 XYP 1 O2B  polymer 1 1 7  ? ? ? 
PRD_900116 O3A  O6  O 0 1 N N N 64.944 65.808 18.894 -1.787 1.585  -1.596 XYP 1 O3B  polymer 1 1 8  ? ? ? 
PRD_900116 O4A  O5  O 0 1 N N N 62.601 66.032 17.300 0.022  -0.440 -0.695 XYP 1 O4B  polymer 1 1 9  ? ? ? 
PRD_900116 O5A  O7  O 0 1 N N N 61.492 63.643 19.942 -2.918 -1.031 1.411  XYP 1 O5B  polymer 1 1 10 ? ? ? 
PRD_900116 C1B  C5  C 0 1 N N S 62.805 65.537 16.116 1.220  -0.261 0.063  XYP 2 C1B  polymer 1 1 11 ? ? ? 
PRD_900116 C2B  C3  C 0 1 N N R 62.263 66.524 15.005 2.417  -0.761 -0.750 XYP 2 C2B  polymer 1 1 12 ? ? ? 
PRD_900116 C3B  C2  C 0 1 N N S 62.560 66.033 13.636 3.703  -0.511 0.043  XYP 2 C3B  polymer 1 1 13 ? ? ? 
PRD_900116 C4B  C1  C 0 1 N N R 63.947 65.755 13.420 3.806  0.981  0.372  XYP 2 C4B  polymer 1 1 14 ? ? ? 
PRD_900116 C5B  C4  C 0 1 N N N 64.542 64.882 14.493 2.556  1.414  1.142  XYP 2 C5B  polymer 1 1 15 ? ? ? 
PRD_900116 O2B  O3  O 0 1 N N N 60.863 66.689 15.161 2.274  -2.161 -1.000 XYP 2 O2B  polymer 1 1 16 ? ? ? 
PRD_900116 O3B  O2  O 0 1 N N N 62.135 67.086 12.661 4.832  -0.907 -0.738 XYP 2 O3B  polymer 1 1 17 ? ? ? 
PRD_900116 O4B  O1  O 0 1 N N N 64.114 65.051 12.120 4.965  1.215  1.174  XYP 2 O4B  polymer 1 1 18 ? ? ? 
PRD_900116 O5B  O4  O 0 1 N N N 64.275 65.381 15.859 1.394  1.126  0.361  XYP 2 O5B  polymer 1 1 19 ? ? ? 
PRD_900116 HO1A H18 H 0 0 N N N 62.856 63.709 22.777 -5.476 -1.105 1.790  XYP 1 HO4A polymer 1 1 20 ? ? ? 
PRD_900116 H1A1 H15 H 0 0 N N N 61.704 65.134 21.405 -4.172 -1.397 -0.191 XYP 1 H1B  polymer 1 1 21 ? ? ? 
PRD_900116 H2A  H16 H 0 1 N N N 64.231 63.798 20.340 -3.368 1.461  0.521  XYP 1 H2B  polymer 1 1 22 ? ? ? 
PRD_900116 H3A  H11 H 0 1 N N N 63.139 66.536 19.692 -2.415 -0.381 -1.722 XYP 1 H3B  polymer 1 1 23 ? ? ? 
PRD_900116 H4A  H10 H 0 1 N N N 63.304 64.147 17.862 -0.956 0.675  0.745  XYP 1 H4B  polymer 1 1 24 ? ? ? 
PRD_900116 H5A1 H14 H 0 0 N N N 60.895 63.999 17.953 -0.958 -1.679 1.479  XYP 1 H5B1 polymer 1 1 25 ? ? ? 
PRD_900116 H5A2 H13 H 0 0 N N N 60.791 65.418 19.050 -1.870 -2.147 0.023  XYP 1 H5B2 polymer 1 1 26 ? ? ? 
PRD_900116 HO2A H17 H 0 0 N N N 64.308 64.874 22.421 -5.408 1.244  -0.704 XYP 1 HO2B polymer 1 1 27 ? ? ? 
PRD_900116 HO3A H12 H 0 0 N N N 65.477 66.174 19.590 -2.414 1.953  -2.234 XYP 1 HO3B polymer 1 1 28 ? ? ? 
PRD_900116 H1B  H9  H 0 1 N N N 62.310 64.564 15.980 1.151  -0.826 0.992  XYP 2 H1B  polymer 1 1 29 ? ? ? 
PRD_900116 H2B  H5  H 0 1 N N N 62.766 67.492 15.149 2.464  -0.225 -1.698 XYP 2 H2B  polymer 1 1 30 ? ? ? 
PRD_900116 H3B  H3  H 0 1 N N N 61.970 65.124 13.450 3.679  -1.087 0.969  XYP 2 H3B  polymer 1 1 31 ? ? ? 
PRD_900116 H4B  H2  H 0 1 N N N 64.510 66.699 13.386 3.882  1.553  -0.553 XYP 2 H4B  polymer 1 1 32 ? ? ? 
PRD_900116 H5B1 H8  H 0 0 N N N 65.631 64.836 14.343 2.603  2.484  1.341  XYP 2 H5B1 polymer 1 1 33 ? ? ? 
PRD_900116 H5B2 H7  H 0 0 N N N 64.116 63.872 14.399 2.503  0.870  2.085  XYP 2 H5B2 polymer 1 1 34 ? ? ? 
PRD_900116 HO2B H6  H 0 0 N N N 60.676 67.003 16.038 1.479  -2.392 -1.499 XYP 2 HO2B polymer 1 1 35 ? ? ? 
PRD_900116 HO3B H4  H 0 0 N N N 61.215 67.284 12.789 5.682  -0.771 -0.299 XYP 2 HO3B polymer 1 1 36 ? ? ? 
PRD_900116 HO4B H1  H 0 0 N N N 65.035 64.866 11.976 5.093  2.141  1.420  XYP 2 HO4B polymer 1 1 37 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900116 O4B C4B  SING N N 1  
PRD_900116 O3B C3B  SING N N 2  
PRD_900116 C4B C3B  SING N N 3  
PRD_900116 C4B C5B  SING N N 4  
PRD_900116 C3B C2B  SING N N 5  
PRD_900116 C5B O5B  SING N N 6  
PRD_900116 C2B O2B  SING N N 7  
PRD_900116 C2B C1B  SING N N 8  
PRD_900116 O5B C1B  SING N N 9  
PRD_900116 C1B O4A  SING N N 10 
PRD_900116 O4A C4A  SING N N 11 
PRD_900116 C4A C5A  SING N N 12 
PRD_900116 C4A C3A  SING N N 13 
PRD_900116 C5A O5A  SING N N 14 
PRD_900116 O3A C3A  SING N N 15 
PRD_900116 C3A C2A  SING N N 16 
PRD_900116 O5A C1A  SING N N 17 
PRD_900116 C2A C1A  SING N N 18 
PRD_900116 C2A O2A  SING N N 19 
PRD_900116 C1A O1A  SING N N 20 
PRD_900116 O4B HO4B SING N N 21 
PRD_900116 C4B H4B  SING N N 22 
PRD_900116 C3B H3B  SING N N 23 
PRD_900116 O3B HO3B SING N N 24 
PRD_900116 C2B H2B  SING N N 25 
PRD_900116 O2B HO2B SING N N 26 
PRD_900116 C5B H5B2 SING N N 27 
PRD_900116 C5B H5B1 SING N N 28 
PRD_900116 C1B H1B  SING N N 29 
PRD_900116 C4A H4A  SING N N 30 
PRD_900116 C3A H3A  SING N N 31 
PRD_900116 O3A HO3A SING N N 32 
PRD_900116 C5A H5A2 SING N N 33 
PRD_900116 C5A H5A1 SING N N 34 
PRD_900116 C1A H1A1 SING N N 35 
PRD_900116 C2A H2A  SING N N 36 
PRD_900116 O2A HO2A SING N N 37 
PRD_900116 O1A HO1A SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900116 SMILES           ACDLabs              12.01 "OC1C(C(O)C(OC1)OC2COC(O)C(C2O)O)O"                                                                                   
PRD_900116 InChI            InChI                1.03  "InChI=1S/C10H18O9/c11-3-1-18-10(8(15)5(3)12)19-4-2-17-9(16)7(14)6(4)13/h3-16H,1-2H2/t3-,4-,5+,6+,7-,8-,9-,10+/m1/s1" 
PRD_900116 InChIKey         InChI                1.03  LGQKSQQRKHFMLI-SJYYZXOBSA-N                                                                                           
PRD_900116 SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1CO[C@@H](O[C@@H]2CO[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O"                                                 
PRD_900116 SMILES           CACTVS               3.385 "O[CH]1CO[CH](O[CH]2CO[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O"                                                             
PRD_900116 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2CO[C@H]([C@@H]([C@H]2O)O)O)O)O)O"                                             
PRD_900116 SMILES           "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(O1)OC2COC(C(C2O)O)O)O)O)O"                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_900116 "SYSTEMATIC NAME" ACDLabs              12.01 4-O-beta-D-xylopyranosyl-beta-D-xylopyranose                                                                
PRD_900116 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},3~{R},4~{S},5~{R})-2-[(3~{R},4~{R},5~{R},6~{R})-4,5,6-tris(oxidanyl)oxan-3-yl]oxyoxane-3,4,5-triol" 
# 
