data_PRDCC_000318
# 
_chem_comp.id                                    PRD_000318 
_chem_comp.name                                  "N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)pentyl]-L-prolinamide" 
_chem_comp.formula                               "C21 H37 B N4 O8" 
_chem_comp.formula_weight                        484.351 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_000318 C1  C1  C 0 1 N N N ?      ?      ?      6.007  -0.756 0.098  MSU 1 C1  polymer 1 1 1  ? ? ? 
PRD_000318 O1  O1  O 0 1 N N N ?      ?      ?      5.860  -1.940 -0.123 MSU 1 O1  polymer 1 1 2  ? ? ? 
PRD_000318 C2  C2  C 0 1 N N N ?      ?      ?      7.390  -0.156 0.104  MSU 1 C2  polymer 1 1 3  ? ? ? 
PRD_000318 C3  C3  C 0 1 N N N ?      ?      ?      8.420  -1.247 -0.195 MSU 1 C3  polymer 1 1 4  ? ? ? 
PRD_000318 C4  C4  C 0 1 N N N ?      ?      ?      9.803  -0.648 -0.190 MSU 1 C4  polymer 1 1 5  ? ? ? 
PRD_000318 O2  O2  O 0 1 N N N ?      ?      ?      9.949  0.531  0.030  MSU 1 OT1 polymer 1 1 6  ? ? ? 
PRD_000318 O3  O3  O 0 1 N N N ?      ?      ?      10.872 -1.423 -0.430 MSU 1 OT2 polymer 1 1 7  ? ? ? 
PRD_000318 C5  C5  C 0 1 N N N ?      ?      ?      12.172 -0.778 -0.409 MSU 1 CT  polymer 1 1 8  ? ? ? 
PRD_000318 N1  N1  N 0 1 N N N 12.944 41.783 18.894 4.934  0.024  0.334  ALA 2 N   polymer 1 1 9  ? ? ? 
PRD_000318 C6  C6  C 0 1 N N S 13.815 40.580 18.751 3.589  -0.558 0.323  ALA 2 CA  polymer 1 1 10 ? ? ? 
PRD_000318 C7  C7  C 0 1 N N N 13.020 39.263 18.887 2.581  0.513  -0.004 ALA 2 C   polymer 1 1 11 ? ? ? 
PRD_000318 O4  O4  O 0 1 N N N 12.236 39.111 19.863 2.949  1.651  -0.207 ALA 2 O   polymer 1 1 12 ? ? ? 
PRD_000318 C8  C8  C 0 1 N N N 15.045 40.361 19.621 3.278  -1.149 1.699  ALA 2 CB  polymer 1 1 13 ? ? ? 
PRD_000318 N2  N2  N 0 1 N N N 13.314 38.396 17.915 1.270  0.207  -0.069 ALA 3 N   polymer 1 1 14 ? ? ? 
PRD_000318 C9  C9  C 0 1 N N S 12.617 37.089 18.038 0.290  1.249  -0.387 ALA 3 CA  polymer 1 1 15 ? ? ? 
PRD_000318 C10 C10 C 0 1 N N N 13.633 36.004 17.740 -1.054 0.863  0.178  ALA 3 C   polymer 1 1 16 ? ? ? 
PRD_000318 O5  O5  O 0 1 N N N 14.491 36.314 16.911 -1.320 -0.305 0.365  ALA 3 O   polymer 1 1 17 ? ? ? 
PRD_000318 C11 C11 C 0 1 N N N 11.493 36.995 17.047 0.180  1.401  -1.905 ALA 3 CB  polymer 1 1 18 ? ? ? 
PRD_000318 N3  N3  N 0 1 N N N 13.407 34.854 18.347 -1.959 1.816  0.475  PRO 4 N   polymer 1 1 19 ? ? ? 
PRD_000318 C12 C12 C 0 1 N N S 14.208 33.666 18.030 -3.262 1.590  1.116  PRO 4 CA  polymer 1 1 20 ? ? ? 
PRD_000318 C13 C13 C 0 1 N N N 13.836 33.216 16.594 -4.095 0.660  0.272  PRO 4 C   polymer 1 1 21 ? ? ? 
PRD_000318 O6  O6  O 0 1 N N N 12.636 33.299 16.174 -3.649 0.223  -0.768 PRO 4 O   polymer 1 1 22 ? ? ? 
PRD_000318 C14 C14 C 0 1 N N N 13.777 32.701 19.159 -3.960 2.962  1.230  PRO 4 CB  polymer 1 1 23 ? ? ? 
PRD_000318 C15 C15 C 0 1 N N N 12.543 33.199 19.855 -3.253 3.804  0.136  PRO 4 CG  polymer 1 1 24 ? ? ? 
PRD_000318 C16 C16 C 0 1 N N N 12.286 34.559 19.253 -1.803 3.259  0.215  PRO 4 CD  polymer 1 1 25 ? ? ? 
PRD_000318 N4  N4  N 0 1 N N N 14.777 32.732 15.843 -5.334 0.314  0.672  BNO 5 N   polymer 1 1 26 ? ? ? 
PRD_000318 C17 C17 C 0 1 N N R 14.546 32.280 14.454 -6.143 -0.590 -0.149 BNO 5 CA  polymer 1 1 27 ? ? ? 
PRD_000318 C18 C18 C 0 1 N N N 15.514 33.126 13.536 -6.797 -1.644 0.747  BNO 5 CB  polymer 1 1 28 ? ? ? 
PRD_000318 C19 C19 C 0 1 N N N 15.211 34.591 13.781 -7.642 -2.588 -0.110 BNO 5 CG  polymer 1 1 29 ? ? ? 
PRD_000318 C20 C20 C 0 1 N N N 14.256 35.099 12.705 -8.297 -3.642 0.785  BNO 5 CD  polymer 1 1 30 ? ? ? 
PRD_000318 C21 C21 C 0 1 N N N 13.209 35.939 13.487 -9.142 -4.587 -0.072 BNO 5 CE  polymer 1 1 31 ? ? ? 
PRD_000318 B1  B1  B 0 1 N N N 14.810 30.749 14.194 -7.257 0.232  -0.889 BNO 5 B   polymer 1 1 32 ? ? ? 
PRD_000318 O7  O7  O 0 1 N N N 14.812 30.265 12.761 -7.737 -0.202 -2.154 BNO 5 O1  polymer 1 1 33 ? ? ? 
PRD_000318 O8  O8  O 0 1 N N N 13.942 30.009 15.176 -7.786 1.408  -0.295 BNO 5 O2  polymer 1 1 34 ? ? ? 
PRD_000318 H1  H1  H 0 1 N N N ?      ?      ?      7.452  0.620  -0.659 MSU 1 H21 polymer 1 1 35 ? ? ? 
PRD_000318 H2  H2  H 0 1 N N N ?      ?      ?      7.594  0.278  1.082  MSU 1 H22 polymer 1 1 36 ? ? ? 
PRD_000318 H3  H3  H 0 1 N N N ?      ?      ?      8.358  -2.024 0.567  MSU 1 H31 polymer 1 1 37 ? ? ? 
PRD_000318 H4  H4  H 0 1 N N N ?      ?      ?      8.216  -1.682 -1.174 MSU 1 H32 polymer 1 1 38 ? ? ? 
PRD_000318 H5  H5  H 0 1 N N N ?      ?      ?      12.344 -0.338 0.573  MSU 1 HT1 polymer 1 1 39 ? ? ? 
PRD_000318 H6  H6  H 0 1 N N N ?      ?      ?      12.947 -1.516 -0.617 MSU 1 HT2 polymer 1 1 40 ? ? ? 
PRD_000318 H7  H7  H 0 1 N N N ?      ?      ?      12.202 0.004  -1.168 MSU 1 HT3 polymer 1 1 41 ? ? ? 
PRD_000318 H8  H8  H 0 1 N N N 12.769 42.728 19.170 5.051  0.970  0.510  ALA 2 H   polymer 1 1 42 ? ? ? 
PRD_000318 H9  H9  H 0 1 N N N 14.183 40.594 17.715 3.540  -1.345 -0.430 ALA 2 HA  polymer 1 1 43 ? ? ? 
PRD_000318 H10 H10 H 0 1 N N N 15.529 39.414 19.340 2.278  -1.582 1.691  ALA 2 HB1 polymer 1 1 44 ? ? ? 
PRD_000318 H11 H11 H 0 1 N N N 15.751 41.192 19.474 4.007  -1.924 1.935  ALA 2 HB2 polymer 1 1 45 ? ? ? 
PRD_000318 H12 H12 H 0 1 N N N 14.744 40.319 20.678 3.327  -0.363 2.452  ALA 2 HB3 polymer 1 1 46 ? ? ? 
PRD_000318 H13 H13 H 0 1 N N N 13.947 38.607 17.170 0.975  -0.703 0.093  ALA 3 H   polymer 1 1 47 ? ? ? 
PRD_000318 H14 H14 H 0 1 N N N 12.228 36.962 19.059 0.610  2.194  0.051  ALA 3 HA  polymer 1 1 48 ? ? ? 
PRD_000318 H15 H15 H 0 1 N N N 10.990 36.022 17.153 1.168  1.593  -2.323 ALA 3 HB1 polymer 1 1 49 ? ? ? 
PRD_000318 H16 H16 H 0 1 N N N 10.771 37.803 17.234 -0.224 0.484  -2.334 ALA 3 HB2 polymer 1 1 50 ? ? ? 
PRD_000318 H17 H17 H 0 1 N N N 11.894 37.091 16.027 -0.482 2.234  -2.140 ALA 3 HB3 polymer 1 1 51 ? ? ? 
PRD_000318 H18 H18 H 0 1 N N N 15.286 33.876 18.097 -3.118 1.162  2.108  PRO 4 HA  polymer 1 1 52 ? ? ? 
PRD_000318 H19 H19 H 0 1 N N N 13.570 31.711 18.726 -5.026 2.871  1.019  PRO 4 HB2 polymer 1 1 53 ? ? ? 
PRD_000318 H20 H20 H 0 1 N N N 14.593 32.618 19.891 -3.797 3.397  2.217  PRO 4 HB3 polymer 1 1 54 ? ? ? 
PRD_000318 H21 H21 H 0 1 N N N 11.694 32.525 19.668 -3.691 3.617  -0.845 PRO 4 HG2 polymer 1 1 55 ? ? ? 
PRD_000318 H22 H22 H 0 1 N N N 12.715 33.281 20.938 -3.284 4.866  0.380  PRO 4 HG3 polymer 1 1 56 ? ? ? 
PRD_000318 H23 H23 H 0 1 N N N 12.233 35.319 20.047 -1.261 3.735  1.033  PRO 4 HD2 polymer 1 1 57 ? ? ? 
PRD_000318 H24 H24 H 0 1 N N N 11.340 34.550 18.691 -1.285 3.421  -0.730 PRO 4 HD3 polymer 1 1 58 ? ? ? 
PRD_000318 H25 H25 H 0 1 N N N 15.700 32.661 16.221 -5.690 0.664  1.504  BNO 5 H   polymer 1 1 59 ? ? ? 
PRD_000318 H26 H26 H 0 1 N N N 13.510 32.506 14.162 -5.506 -1.082 -0.883 BNO 5 HA  polymer 1 1 60 ? ? ? 
PRD_000318 H27 H27 H 0 1 N N N 16.561 32.911 13.796 -6.024 -2.214 1.261  BNO 5 HB1 polymer 1 1 61 ? ? ? 
PRD_000318 H28 H28 H 0 1 N N N 15.340 32.878 12.478 -7.435 -1.152 1.482  BNO 5 HB2 polymer 1 1 62 ? ? ? 
PRD_000318 H29 H29 H 0 1 N N N 14.745 34.709 14.770 -8.416 -2.018 -0.624 BNO 5 HG1 polymer 1 1 63 ? ? ? 
PRD_000318 H30 H30 H 0 1 N N N 16.146 35.170 13.745 -7.005 -3.080 -0.845 BNO 5 HG2 polymer 1 1 64 ? ? ? 
PRD_000318 H31 H31 H 0 1 N N N 14.790 35.724 11.974 -7.523 -4.213 1.299  BNO 5 HD1 polymer 1 1 65 ? ? ? 
PRD_000318 H32 H32 H 0 1 N N N 13.772 34.259 12.185 -8.934 -3.150 1.520  BNO 5 HD2 polymer 1 1 66 ? ? ? 
PRD_000318 H33 H33 H 0 1 N N N 12.470 36.351 12.784 -9.915 -4.016 -0.586 BNO 5 HE1 polymer 1 1 67 ? ? ? 
PRD_000318 H34 H34 H 0 1 N N N 12.699 35.298 14.221 -8.504 -5.079 -0.807 BNO 5 HE2 polymer 1 1 68 ? ? ? 
PRD_000318 H35 H35 H 0 1 N N N 13.717 36.763 14.010 -9.608 -5.337 0.566  BNO 5 HE3 polymer 1 1 69 ? ? ? 
PRD_000318 H36 H36 H 0 1 N N N 14.982 29.330 12.742 -7.318 -1.011 -2.477 BNO 5 HO1 polymer 1 1 70 ? ? ? 
PRD_000318 H37 H37 H 0 1 N N N 14.062 29.073 15.063 -7.398 1.623  0.565  BNO 5 HO2 polymer 1 1 71 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_000318 C1  O1  DOUB N N 1  
PRD_000318 C1  C2  SING N N 2  
PRD_000318 C2  C3  SING N N 3  
PRD_000318 C2  H1  SING N N 4  
PRD_000318 C2  H2  SING N N 5  
PRD_000318 C3  C4  SING N N 6  
PRD_000318 C3  H3  SING N N 7  
PRD_000318 C3  H4  SING N N 8  
PRD_000318 C4  O2  DOUB N N 9  
PRD_000318 C4  O3  SING N N 10 
PRD_000318 O3  C5  SING N N 11 
PRD_000318 C5  H5  SING N N 12 
PRD_000318 C5  H6  SING N N 13 
PRD_000318 C5  H7  SING N N 14 
PRD_000318 N1  C6  SING N N 15 
PRD_000318 N1  H8  SING N N 16 
PRD_000318 C6  C7  SING N N 17 
PRD_000318 C6  C8  SING N N 18 
PRD_000318 C6  H9  SING N N 19 
PRD_000318 C7  O4  DOUB N N 20 
PRD_000318 C8  H10 SING N N 21 
PRD_000318 C8  H11 SING N N 22 
PRD_000318 C8  H12 SING N N 23 
PRD_000318 N2  C9  SING N N 24 
PRD_000318 N2  H13 SING N N 25 
PRD_000318 C9  C10 SING N N 26 
PRD_000318 C9  C11 SING N N 27 
PRD_000318 C9  H14 SING N N 28 
PRD_000318 C10 O5  DOUB N N 29 
PRD_000318 C11 H15 SING N N 30 
PRD_000318 C11 H16 SING N N 31 
PRD_000318 C11 H17 SING N N 32 
PRD_000318 N3  C12 SING N N 33 
PRD_000318 N3  C16 SING N N 34 
PRD_000318 C12 C13 SING N N 35 
PRD_000318 C12 C14 SING N N 36 
PRD_000318 C12 H18 SING N N 37 
PRD_000318 C13 O6  DOUB N N 38 
PRD_000318 C14 C15 SING N N 39 
PRD_000318 C14 H19 SING N N 40 
PRD_000318 C14 H20 SING N N 41 
PRD_000318 C15 C16 SING N N 42 
PRD_000318 C15 H21 SING N N 43 
PRD_000318 C15 H22 SING N N 44 
PRD_000318 C16 H23 SING N N 45 
PRD_000318 C16 H24 SING N N 46 
PRD_000318 N4  C17 SING N N 47 
PRD_000318 N4  H25 SING N N 48 
PRD_000318 C17 C18 SING N N 49 
PRD_000318 C17 B1  SING N N 50 
PRD_000318 C17 H26 SING N N 51 
PRD_000318 C18 C19 SING N N 52 
PRD_000318 C18 H27 SING N N 53 
PRD_000318 C18 H28 SING N N 54 
PRD_000318 C19 C20 SING N N 55 
PRD_000318 C19 H29 SING N N 56 
PRD_000318 C19 H30 SING N N 57 
PRD_000318 C20 C21 SING N N 58 
PRD_000318 C20 H31 SING N N 59 
PRD_000318 C20 H32 SING N N 60 
PRD_000318 C21 H33 SING N N 61 
PRD_000318 C21 H34 SING N N 62 
PRD_000318 C21 H35 SING N N 63 
PRD_000318 B1  O7  SING N N 64 
PRD_000318 B1  O8  SING N N 65 
PRD_000318 O7  H36 SING N N 66 
PRD_000318 O8  H37 SING N N 67 
PRD_000318 C1  N1  SING N N 68 
PRD_000318 C13 N4  SING N N 69 
PRD_000318 C7  N2  SING N N 70 
PRD_000318 C10 N3  SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_000318 SMILES           ACDLabs              12.01 "O=C(NC(B(O)O)CCCC)C1N(C(=O)C(NC(=O)C(NC(=O)CCC(=O)OC)C)C)CCC1"                                                                                                                                       
PRD_000318 InChI            InChI                1.03  "InChI=1S/C21H37BN4O8/c1-5-6-9-16(22(32)33)25-20(30)15-8-7-12-26(15)21(31)14(3)24-19(29)13(2)23-17(27)10-11-18(28)34-4/h13-16,32-33H,5-12H2,1-4H3,(H,23,27)(H,24,29)(H,25,30)/t13-,14?,15?,16-/m0/s1" 
PRD_000318 InChIKey         InChI                1.03  PQKYAJMFSHKDTC-LBDPXKHJSA-N                                                                                                                                                                           
PRD_000318 SMILES_CANONICAL CACTVS               3.370 "CCCC[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)CCC(=O)OC)B(O)O"                                                                                                                        
PRD_000318 SMILES           CACTVS               3.370 "CCCC[CH](NC(=O)[CH]1CCCN1C(=O)[CH](C)NC(=O)[CH](C)NC(=O)CCC(=O)OC)B(O)O"                                                                                                                             
PRD_000318 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "B([C@H](CCCC)NC(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)CCC(=O)OC)(O)O"                                                                                                                      
PRD_000318 SMILES           "OpenEye OEToolkits" 1.7.6 "B(C(CCCC)NC(=O)C1CCCN1C(=O)C(C)NC(=O)C(C)NC(=O)CCC(=O)OC)(O)O"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_000318 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)pentyl]-L-prolinamide"                                                          
PRD_000318 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(1R)-1-[[(2S)-1-[(2S)-2-[[(2S)-2-[(4-methoxy-4-oxidanylidene-butanoyl)amino]propanoyl]amino]propanoyl]pyrrolidin-2-yl]carbonylamino]pentyl]boronic acid" 
# 
