data_PRDCC_000309
# 
_chem_comp.id                                    PRD_000309 
_chem_comp.name                                  "L-leucyl-N-(2-oxopropyl)-L-phenylalaninamide" 
_chem_comp.formula                               "C26 H31 N5 O5" 
_chem_comp.formula_weight                        493.555 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_000309 C1  C1  C 0  1 N N N ?      ?      ?      3.413   0.780  0.327  PHQ 1 C1   polymer 1 1 1  ? ? ? 
PRD_000309 O1  O1  O 0  1 N N N ?      ?      ?      3.496   1.490  1.309  PHQ 1 O1   polymer 1 1 2  ? ? ? 
PRD_000309 O2  O2  O 0  1 N N N ?      ?      ?      4.521   0.223  -0.197 PHQ 1 O2   polymer 1 1 3  ? ? ? 
PRD_000309 C2  C2  C 0  1 N N N ?      ?      ?      5.781   0.516  0.463  PHQ 1 C2   polymer 1 1 4  ? ? ? 
PRD_000309 C3  C3  C 0  1 Y N N ?      ?      ?      6.901   -0.188 -0.259 PHQ 1 C3   polymer 1 1 5  ? ? ? 
PRD_000309 C4  C4  C 0  1 Y N N ?      ?      ?      7.562   0.445  -1.295 PHQ 1 C4   polymer 1 1 6  ? ? ? 
PRD_000309 C5  C5  C 0  1 Y N N ?      ?      ?      8.589   -0.200 -1.957 PHQ 1 C5   polymer 1 1 7  ? ? ? 
PRD_000309 C6  C6  C 0  1 Y N N ?      ?      ?      8.956   -1.479 -1.583 PHQ 1 C6   polymer 1 1 8  ? ? ? 
PRD_000309 C7  C7  C 0  1 Y N N ?      ?      ?      8.296   -2.113 -0.547 PHQ 1 C7   polymer 1 1 9  ? ? ? 
PRD_000309 C8  C8  C 0  1 Y N N ?      ?      ?      7.271   -1.465 0.118  PHQ 1 C8   polymer 1 1 10 ? ? ? 
PRD_000309 N1  N1  N 0  1 N N N -2.522 8.622  -0.480 2.210   0.544  -0.234 LEU 2 N    polymer 1 1 11 ? ? ? 
PRD_000309 C9  C9  C 0  1 N N S -2.973 7.825  0.655  1.003   1.145  0.340  LEU 2 CA   polymer 1 1 12 ? ? ? 
PRD_000309 C10 C10 C 0  1 N N N -2.162 8.038  1.928  -0.196  0.306  -0.020 LEU 2 C    polymer 1 1 13 ? ? ? 
PRD_000309 O3  O3  O 0  1 N N N -1.815 9.197  2.213  -0.056  -0.695 -0.691 LEU 2 O    polymer 1 1 14 ? ? ? 
PRD_000309 C11 C11 C 0  1 N N N -3.044 6.359  0.317  0.823   2.559  -0.217 LEU 2 CB   polymer 1 1 15 ? ? ? 
PRD_000309 C12 C12 C 0  1 N N N -4.214 5.575  0.869  1.979   3.444  0.253  LEU 2 CG   polymer 1 1 16 ? ? ? 
PRD_000309 C13 C13 C 0  1 N N N -4.585 6.134  2.247  1.867   4.821  -0.403 LEU 2 CD1  polymer 1 1 17 ? ? ? 
PRD_000309 C14 C14 C 0  1 N N N -5.398 5.649  -0.105 1.918   3.597  1.774  LEU 2 CD2  polymer 1 1 18 ? ? ? 
PRD_000309 N2  N2  N 0  1 N N N -1.871 6.972  2.719  -1.423  0.669  0.402  PHE 3 N    polymer 1 1 19 ? ? ? 
PRD_000309 C15 C15 C 0  1 N N S -1.480 7.160  4.122  -2.589  -0.147 0.052  PHE 3 CA   polymer 1 1 20 ? ? ? 
PRD_000309 C16 C16 C 0  1 N N N -0.122 7.825  4.237  -3.827  0.711  0.076  PHE 3 C    polymer 1 1 21 ? ? ? 
PRD_000309 O4  O4  O 0  1 N N N 0.842  7.190  3.809  -3.745  1.888  0.359  PHE 3 O    polymer 1 1 22 ? ? ? 
PRD_000309 C17 C17 C 0  1 N N N -1.360 5.839  4.892  -2.737  -1.286 1.064  PHE 3 CB   polymer 1 1 23 ? ? ? 
PRD_000309 C18 C18 C 0  1 Y N N -2.678 5.119  5.018  -1.554  -2.213 0.953  PHE 3 CG   polymer 1 1 24 ? ? ? 
PRD_000309 C19 C19 C 0  1 Y N N -3.622 5.544  5.937  -0.426  -1.988 1.720  PHE 3 CD1  polymer 1 1 25 ? ? ? 
PRD_000309 C20 C20 C 0  1 Y N N -2.929 4.028  4.204  -1.599  -3.291 0.089  PHE 3 CD2  polymer 1 1 26 ? ? ? 
PRD_000309 C21 C21 C 0  1 Y N N -4.824 4.858  6.011  0.659   -2.839 1.618  PHE 3 CE1  polymer 1 1 27 ? ? ? 
PRD_000309 C22 C22 C 0  1 Y N N -4.137 3.343  4.277  -0.514  -4.141 -0.012 PHE 3 CE2  polymer 1 1 28 ? ? ? 
PRD_000309 C23 C23 C 0  1 Y N N -5.094 3.759  5.194  0.616   -3.914 0.751  PHE 3 CZ   polymer 1 1 29 ? ? ? 
PRD_000309 N3  N3  N 0  1 N N N -0.037 9.053  4.806  -5.027  0.170  -0.215 GLY 4 N    polymer 1 1 30 ? ? ? 
PRD_000309 C24 C24 C 0  1 N N N 1.210  9.836  5.013  -6.231  1.004  -0.192 GLY 4 CA   polymer 1 1 31 ? ? ? 
PRD_000309 C25 C25 C 0  1 N N N 1.869  9.532  6.352  -7.430  0.166  -0.552 GLY 4 C    polymer 1 1 32 ? ? ? 
PRD_000309 O5  O5  O 0  1 N N N 3.037  9.730  6.666  -7.292  -1.016 -0.804 GLY 4 O    polymer 1 1 33 ? ? ? 
PRD_000309 C26 C26 C 0  1 N N N 1.038  8.863  7.428  -8.695  0.743  -0.596 0HQ 5 C1   polymer 1 1 34 ? ? ? 
PRD_000309 N4  N4  N 1  1 N Y N ?      ?      ?      -9.689  0.047  -0.895 0HQ 5 N1   polymer 1 1 35 ? ? ? 
PRD_000309 N5  N5  N -1 1 N Y N ?      ?      ?      -10.584 -0.579 -1.163 0HQ 5 N2   polymer 1 1 36 ? ? ? 
PRD_000309 H1  H1  H 0  1 N N N ?      ?      ?      5.958   1.591  0.448  PHQ 1 H21  polymer 1 1 37 ? ? ? 
PRD_000309 H2  H2  H 0  1 N N N ?      ?      ?      5.739   0.169  1.495  PHQ 1 H22  polymer 1 1 38 ? ? ? 
PRD_000309 H3  H3  H 0  1 N N N ?      ?      ?      7.275   1.445  -1.587 PHQ 1 H41  polymer 1 1 39 ? ? ? 
PRD_000309 H4  H4  H 0  1 N N N ?      ?      ?      9.105   0.295  -2.766 PHQ 1 H51  polymer 1 1 40 ? ? ? 
PRD_000309 H5  H5  H 0  1 N N N ?      ?      ?      9.759   -1.984 -2.101 PHQ 1 H61  polymer 1 1 41 ? ? ? 
PRD_000309 H6  H6  H 0  1 N N N ?      ?      ?      8.582   -3.112 -0.255 PHQ 1 H71  polymer 1 1 42 ? ? ? 
PRD_000309 H7  H7  H 0  1 N N N ?      ?      ?      6.758   -1.959 0.930  PHQ 1 H81  polymer 1 1 43 ? ? ? 
PRD_000309 H8  H8  H 0  1 N N N -2.505 9.497  -0.964 2.144   -0.023 -1.018 LEU 2 H    polymer 1 1 44 ? ? ? 
PRD_000309 H9  H9  H 0  1 N N N -4.000 8.143  0.886  1.102   1.192  1.424  LEU 2 HA   polymer 1 1 45 ? ? ? 
PRD_000309 H10 H10 H 0  1 N N N -3.077 6.274  -0.779 0.814   2.521  -1.306 LEU 2 HB2  polymer 1 1 46 ? ? ? 
PRD_000309 H11 H11 H 0  1 N N N -2.124 5.888  0.694  -0.120  2.972  0.140  LEU 2 HB3  polymer 1 1 47 ? ? ? 
PRD_000309 H12 H12 H 0  1 N N N -3.917 4.522  0.983  2.926   2.984  -0.027 LEU 2 HG   polymer 1 1 48 ? ? ? 
PRD_000309 H13 H13 H 0  0 N N N -5.436 5.569  2.656  0.919   5.281  -0.123 LEU 2 HD11 polymer 1 1 49 ? ? ? 
PRD_000309 H14 H14 H 0  0 N N N -3.723 6.041  2.925  2.690   5.452  -0.068 LEU 2 HD12 polymer 1 1 50 ? ? ? 
PRD_000309 H15 H15 H 0  0 N N N -4.862 7.194  2.150  1.910   4.712  -1.487 LEU 2 HD13 polymer 1 1 51 ? ? ? 
PRD_000309 H16 H16 H 0  0 N N N -6.245 5.077  0.302  0.970   4.057  2.055  LEU 2 HD21 polymer 1 1 52 ? ? ? 
PRD_000309 H17 H17 H 0  0 N N N -5.696 6.699  -0.240 1.998   2.616  2.242  LEU 2 HD22 polymer 1 1 53 ? ? ? 
PRD_000309 H18 H18 H 0  0 N N N -5.102 5.224  -1.075 2.741   4.228  2.109  LEU 2 HD23 polymer 1 1 54 ? ? ? 
PRD_000309 H19 H19 H 0  1 N N N -1.924 6.048  2.341  -1.535  1.469  0.938  PHE 3 H    polymer 1 1 55 ? ? ? 
PRD_000309 H20 H20 H 0  1 N N N -2.226 7.791  4.627  -2.454  -0.563 -0.946 PHE 3 HA   polymer 1 1 56 ? ? ? 
PRD_000309 H21 H21 H 0  1 N N N -0.651 5.186  4.362  -2.782  -0.873 2.071  PHE 3 HB2  polymer 1 1 57 ? ? ? 
PRD_000309 H22 H22 H 0  1 N N N -0.978 6.053  5.901  -3.653  -1.839 0.856  PHE 3 HB3  polymer 1 1 58 ? ? ? 
PRD_000309 H23 H23 H 0  1 N N N -3.427 6.389  6.580  -0.392  -1.148 2.398  PHE 3 HD1  polymer 1 1 59 ? ? ? 
PRD_000309 H24 H24 H 0  1 N N N -2.175 3.704  3.502  -2.482  -3.469 -0.506 PHE 3 HD2  polymer 1 1 60 ? ? ? 
PRD_000309 H25 H25 H 0  1 N N N -5.572 5.182  6.720  1.541   -2.663 2.217  PHE 3 HE1  polymer 1 1 61 ? ? ? 
PRD_000309 H26 H26 H 0  1 N N N -4.328 2.500  3.630  -0.549  -4.984 -0.687 PHE 3 HE2  polymer 1 1 62 ? ? ? 
PRD_000309 H27 H27 H 0  1 N N N -6.037 3.238  5.274  1.464   -4.578 0.671  PHE 3 HZ   polymer 1 1 63 ? ? ? 
PRD_000309 H28 H28 H 0  1 N N N -0.892 9.470  5.115  -5.093  -0.771 -0.441 GLY 4 H    polymer 1 1 64 ? ? ? 
PRD_000309 H29 H29 H 0  1 N N N 1.918  9.593  4.207  -6.366  1.421  0.807  GLY 4 HA2  polymer 1 1 65 ? ? ? 
PRD_000309 H30 H30 H 0  1 N N N 0.965  10.908 4.975  -6.126  1.816  -0.912 GLY 4 HA3  polymer 1 1 66 ? ? ? 
PRD_000309 H31 H31 H 0  1 N Y N 0.699  9.101  8.425  -8.818  1.792  -0.372 0HQ 5 H1   polymer 1 1 67 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_000309 C1  O1  DOUB N N 1  
PRD_000309 C1  O2  SING N N 2  
PRD_000309 O2  C2  SING N N 3  
PRD_000309 C2  C3  SING N N 4  
PRD_000309 C2  H1  SING N N 5  
PRD_000309 C2  H2  SING N N 6  
PRD_000309 C3  C4  DOUB Y N 7  
PRD_000309 C3  C8  SING Y N 8  
PRD_000309 C4  C5  SING Y N 9  
PRD_000309 C4  H3  SING N N 10 
PRD_000309 C5  C6  DOUB Y N 11 
PRD_000309 C5  H4  SING N N 12 
PRD_000309 C6  C7  SING Y N 13 
PRD_000309 C6  H5  SING N N 14 
PRD_000309 C7  C8  DOUB Y N 15 
PRD_000309 C7  H6  SING N N 16 
PRD_000309 C8  H7  SING N N 17 
PRD_000309 N1  C9  SING N N 18 
PRD_000309 N1  H8  SING N N 19 
PRD_000309 C9  C10 SING N N 20 
PRD_000309 C9  C11 SING N N 21 
PRD_000309 C9  H9  SING N N 22 
PRD_000309 C10 O3  DOUB N N 23 
PRD_000309 C11 C12 SING N N 24 
PRD_000309 C11 H10 SING N N 25 
PRD_000309 C11 H11 SING N N 26 
PRD_000309 C12 C13 SING N N 27 
PRD_000309 C12 C14 SING N N 28 
PRD_000309 C12 H12 SING N N 29 
PRD_000309 C13 H13 SING N N 30 
PRD_000309 C13 H14 SING N N 31 
PRD_000309 C13 H15 SING N N 32 
PRD_000309 C14 H16 SING N N 33 
PRD_000309 C14 H17 SING N N 34 
PRD_000309 C14 H18 SING N N 35 
PRD_000309 N2  C15 SING N N 36 
PRD_000309 N2  H19 SING N N 37 
PRD_000309 C15 C16 SING N N 38 
PRD_000309 C15 C17 SING N N 39 
PRD_000309 C15 H20 SING N N 40 
PRD_000309 C16 O4  DOUB N N 41 
PRD_000309 C17 C18 SING N N 42 
PRD_000309 C17 H21 SING N N 43 
PRD_000309 C17 H22 SING N N 44 
PRD_000309 C18 C19 DOUB Y N 45 
PRD_000309 C18 C20 SING Y N 46 
PRD_000309 C19 C21 SING Y N 47 
PRD_000309 C19 H23 SING N N 48 
PRD_000309 C20 C22 DOUB Y N 49 
PRD_000309 C20 H24 SING N N 50 
PRD_000309 C21 C23 DOUB Y N 51 
PRD_000309 C21 H25 SING N N 52 
PRD_000309 C22 C23 SING Y N 53 
PRD_000309 C22 H26 SING N N 54 
PRD_000309 C23 H27 SING N N 55 
PRD_000309 N3  C24 SING N N 56 
PRD_000309 N3  H28 SING N N 57 
PRD_000309 C24 C25 SING N N 58 
PRD_000309 C24 H29 SING N N 59 
PRD_000309 C24 H30 SING N N 60 
PRD_000309 C25 O5  DOUB N N 61 
PRD_000309 C26 N4  DOUB N N 62 
PRD_000309 N4  N5  DOUB N N 63 
PRD_000309 C26 H31 SING N N 64 
PRD_000309 C1  N1  SING N N 65 
PRD_000309 C25 C26 SING N N 66 
PRD_000309 C10 N2  SING N N 67 
PRD_000309 C16 N3  SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_000309 SMILES           ACDLabs              12.01 "[N-]=[N+]=C/C(=O)CNC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CC(C)C)Cc2ccccc2"                                                                                                                                          
PRD_000309 InChI            InChI                1.03  "InChI=1S/C26H31N5O5/c1-18(2)13-22(31-26(35)36-17-20-11-7-4-8-12-20)25(34)30-23(14-19-9-5-3-6-10-19)24(33)28-15-21(32)16-29-27/h3-12,16,18,22-23H,13-15,17H2,1-2H3,(H,28,33)(H,30,34)(H,31,35)/t22-,23-/m1/s1" 
PRD_000309 InChIKey         InChI                1.03  IUGUNYFKCMJXBV-DHIUTWEWSA-N                                                                                                                                                                                    
PRD_000309 SMILES_CANONICAL CACTVS               3.370 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](Cc2ccccc2)C(=O)NCC(=O)C=[N+]=[N-]"                                                                                                                                  
PRD_000309 SMILES           CACTVS               3.370 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](Cc2ccccc2)C(=O)NCC(=O)C=[N+]=[N-]"                                                                                                                                     
PRD_000309 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc2ccccc2"                                                                                                                                 
PRD_000309 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC(Cc1ccccc1)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc2ccccc2"                                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_000309 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(benzyloxy)carbonyl]-L-leucyl-N-(3-diazo-2-oxopropyl)-L-phenylalaninamide"                                                                                         
PRD_000309 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(phenylmethyl) N-[(2S)-1-[[(2S)-1-[(3-diazo-2-oxidanylidene-propyl)amino]-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" 
# 
