data_PRDCC_900049
# 
_chem_comp.id                                    PRD_900049 
_chem_comp.name                                  "6-deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranose" 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C20 H35 N O15" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        529.490 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900049 CBI    C17 C 0 1 N N R 17.633 68.356 47.845 -2.971 2.524  -0.839 NAG 1 C1  polymer 1 1 1  ? ? ? 
PRD_900049 CBS    C18 C 0 1 N N R 16.983 67.078 47.308 -1.639 1.879  -0.445 NAG 1 C2  polymer 1 1 2  ? ? ? 
PRD_900049 CBV    C13 C 0 1 N N R 17.946 66.349 46.367 -1.859 0.384  -0.196 NAG 1 C3  polymer 1 1 3  ? ? ? 
PRD_900049 CBU    C14 C 0 1 N N S 18.423 67.308 45.273 -2.931 0.210  0.885  NAG 1 C4  polymer 1 1 4  ? ? ? 
PRD_900049 CBK    C15 C 0 1 N N R 18.999 68.580 45.901 -4.213 0.920  0.440  NAG 1 C5  polymer 1 1 5  ? ? ? 
PRD_900049 CAV    C16 C 0 1 N N N 19.413 69.561 44.802 -5.269 0.802  1.540  NAG 1 C6  polymer 1 1 6  ? ? ? 
PRD_900049 CBF    C19 C 0 1 N N N 15.338 65.836 48.674 0.073  3.180  -1.592 NAG 1 C7  polymer 1 1 7  ? ? ? 
PRD_900049 CAB    C20 C 0 1 N N N 14.252 66.826 48.244 0.982  3.417  -2.770 NAG 1 C8  polymer 1 1 8  ? ? ? 
PRD_900049 NAX    N1  N 0 1 N N N 16.594 66.197 48.420 -0.670 2.057  -1.529 NAG 1 N2  polymer 1 1 9  ? ? ? 
PRD_900049 OAH    O14 O 0 1 N N N 16.706 69.047 48.686 -2.784 3.930  -1.019 NAG 1 O1  polymer 1 1 10 ? ? ? 
PRD_900049 "O1'"  O10 O 0 1 N N N 17.326 65.188 45.796 -0.637 -0.213 0.243  NAG 1 O3  polymer 1 1 11 ? ? ? 
PRD_900049 OAE    O11 O 0 1 N N N 19.427 66.664 44.483 -3.197 -1.181 1.075  NAG 1 O4  polymer 1 1 12 ? ? ? 
PRD_900049 OBA    O13 O 0 1 N N N 18.016 69.201 46.747 -3.931 2.299  0.195  NAG 1 O5  polymer 1 1 13 ? ? ? 
PRD_900049 OAG    O12 O 0 1 N N N 18.273 69.907 44.012 -6.501 1.362  1.080  NAG 1 O6  polymer 1 1 14 ? ? ? 
PRD_900049 OAD    O15 O 0 1 N N N 15.091 65.010 49.725 0.009  3.999  -0.700 NAG 1 O7  polymer 1 1 15 ? ? ? 
PRD_900049 "C1'"  C12 C 0 1 N N R 17.801 64.002 46.451 -0.267 -1.384 -0.486 GAL 2 C1  polymer 1 1 16 ? ? ? 
PRD_900049 "C2'"  C7  C 0 1 N N R 16.907 62.837 46.054 1.127  -1.840 -0.047 GAL 2 C2  polymer 1 1 17 ? ? ? 
PRD_900049 "C3'"  C8  C 0 1 N N S 17.450 61.572 46.724 1.491  -3.130 -0.790 GAL 2 C3  polymer 1 1 18 ? ? ? 
PRD_900049 "C4'"  C9  C 0 1 N N R 18.922 61.357 46.362 0.419  -4.187 -0.510 GAL 2 C4  polymer 1 1 19 ? ? ? 
PRD_900049 "C5'"  C10 C 0 1 N N R 19.721 62.612 46.725 -0.948 -3.640 -0.931 GAL 2 C5  polymer 1 1 20 ? ? ? 
PRD_900049 "C6'"  C11 C 0 1 N N N 21.188 62.447 46.322 -2.033 -4.667 -0.599 GAL 2 C6  polymer 1 1 21 ? ? ? 
PRD_900049 "O2'"  O5  O 0 1 N N N 15.566 63.106 46.494 2.082  -0.824 -0.359 GAL 2 O2  polymer 1 1 22 ? ? ? 
PRD_900049 "O3'"  O6  O 0 1 N N N 16.683 60.440 46.307 2.760  -3.602 -0.332 GAL 2 O3  polymer 1 1 23 ? ? ? 
PRD_900049 "O4'"  O7  O 0 1 N N N 19.037 61.102 44.959 0.401  -4.492 0.886  GAL 2 O4  polymer 1 1 24 ? ? ? 
PRD_900049 "O5'"  O9  O 0 1 N N N 19.158 63.746 46.046 -1.211 -2.425 -0.227 GAL 2 O5  polymer 1 1 25 ? ? ? 
PRD_900049 "O6'"  O8  O 0 1 N N N 21.913 63.629 46.672 -3.291 -4.208 -1.097 GAL 2 O6  polymer 1 1 26 ? ? ? 
PRD_900049 CBQ    C6  C 0 1 N N S 14.597 62.443 45.667 3.194  -0.778 0.536  FUC 3 C1  polymer 1 1 27 ? ? ? 
PRD_900049 CBO    C1  C 0 1 N N S 13.201 62.643 46.264 4.298  0.096  -0.066 FUC 3 C2  polymer 1 1 28 ? ? ? 
PRD_900049 CBN    C2  C 0 1 N N R 12.814 64.124 46.234 3.775  1.526  -0.230 FUC 3 C3  polymer 1 1 29 ? ? ? 
PRD_900049 CBL    C3  C 0 1 N N S 12.962 64.682 44.817 3.301  2.044  1.131  FUC 3 C4  polymer 1 1 30 ? ? ? 
PRD_900049 CBH    C4  C 0 1 N N S 14.374 64.395 44.296 2.235  1.095  1.687  FUC 3 C5  polymer 1 1 31 ? ? ? 
PRD_900049 CAC    C5  C 0 1 N N N 14.530 64.915 42.866 1.800  1.574  3.073  FUC 3 C6  polymer 1 1 32 ? ? ? 
PRD_900049 OAL    O1  O 0 1 N N N 13.161 62.151 47.606 4.676  -0.424 -1.342 FUC 3 O2  polymer 1 1 33 ? ? ? 
PRD_900049 OAK    O2  O 0 1 N N N 11.460 64.275 46.670 4.821  2.365  -0.723 FUC 3 O3  polymer 1 1 34 ? ? ? 
PRD_900049 OAI    O3  O 0 1 N N N 11.993 64.074 43.959 4.408  2.100  2.033  FUC 3 O4  polymer 1 1 35 ? ? ? 
PRD_900049 OBB    O4  O 0 1 N N N 14.634 62.981 44.332 2.778  -0.223 1.786  FUC 3 O5  polymer 1 1 36 ? ? ? 
PRD_900049 HBI    H29 H 0 1 N N N 18.525 68.075 48.425 -3.328 2.082  -1.769 NAG 1 H1  polymer 1 1 37 ? ? ? 
PRD_900049 HBS    H31 H 0 1 N N N 16.085 67.358 46.737 -1.261 2.348  0.463  NAG 1 H2  polymer 1 1 38 ? ? ? 
PRD_900049 HBV    H22 H 0 1 N N N 18.824 66.039 46.953 -2.189 -0.096 -1.117 NAG 1 H3  polymer 1 1 39 ? ? ? 
PRD_900049 HBU    H23 H 0 1 N N N 17.564 67.582 44.643 -2.579 0.645  1.820  NAG 1 H4  polymer 1 1 40 ? ? ? 
PRD_900049 HBK    H25 H 0 1 N N N 19.888 68.312 46.490 -4.586 0.457  -0.474 NAG 1 H5  polymer 1 1 41 ? ? ? 
PRD_900049 HAV1   H26 H 0 1 N N N 19.830 70.470 45.261 -5.418 -0.248 1.790  NAG 1 H61 polymer 1 1 42 ? ? ? 
PRD_900049 HAV2   H27 H 0 1 N N N 20.174 69.092 44.161 -4.933 1.342  2.426  NAG 1 H62 polymer 1 1 43 ? ? ? 
PRD_900049 HAB1   H33 H 0 1 N N N 13.373 66.713 48.896 0.845  2.621  -3.501 NAG 1 H81 polymer 1 1 44 ? ? ? 
PRD_900049 HAB2   H34 H 0 1 N N N 14.639 67.853 48.326 0.741  4.376  -3.228 NAG 1 H82 polymer 1 1 45 ? ? ? 
PRD_900049 HAB3   H35 H 0 1 N N N 13.964 66.624 47.202 2.019  3.426  -2.433 NAG 1 H83 polymer 1 1 46 ? ? ? 
PRD_900049 HAX    H32 H 0 1 N N N 17.315 65.849 49.020 -0.562 1.366  -2.202 NAG 1 HN2 polymer 1 1 47 ? ? ? 
PRD_900049 HAH    H30 H 0 1 N N N 16.455 68.486 49.410 -3.589 4.404  -1.269 NAG 1 HO1 polymer 1 1 48 ? ? ? 
PRD_900049 HAE    H24 H 0 1 N N N 19.725 67.257 43.803 -3.867 -1.365 1.747  NAG 1 HO4 polymer 1 1 49 ? ? ? 
PRD_900049 HAG    H28 H 0 1 N N N 18.532 70.516 43.331 -7.218 1.322  1.728  NAG 1 HO6 polymer 1 1 50 ? ? ? 
PRD_900049 "H1'"  H21 H 0 1 N N N 17.753 64.130 47.542 -0.257 -1.160 -1.553 GAL 2 H1  polymer 1 1 51 ? ? ? 
PRD_900049 "H2'"  H12 H 0 1 N N N 16.937 62.710 44.962 1.129  -2.025 1.027  GAL 2 H2  polymer 1 1 52 ? ? ? 
PRD_900049 "H3'"  H13 H 0 1 N N N 17.373 61.694 47.814 1.540  -2.932 -1.861 GAL 2 H3  polymer 1 1 53 ? ? ? 
PRD_900049 "H4'"  H15 H 0 1 N N N 19.312 60.505 46.939 0.641  -5.090 -1.078 GAL 2 H4  polymer 1 1 54 ? ? ? 
PRD_900049 "H5'"  H17 H 0 1 N N N 19.668 62.761 47.814 -0.947 -3.446 -2.004 GAL 2 H5  polymer 1 1 55 ? ? ? 
PRD_900049 "H6'1" H18 H 0 1 N N N 21.618 61.583 46.849 -1.784 -5.621 -1.064 GAL 2 H61 polymer 1 1 56 ? ? ? 
PRD_900049 "H6'2" H19 H 0 1 N N N 21.254 62.284 45.236 -2.094 -4.795 0.481  GAL 2 H62 polymer 1 1 57 ? ? ? 
PRD_900049 H2     H14 H 0 1 N N N 17.022 59.656 46.724 3.053  -4.418 -0.761 GAL 2 HO3 polymer 1 1 58 ? ? ? 
PRD_900049 H1     H16 H 0 1 N N N 19.950 60.969 44.735 -0.256 -5.156 1.135  GAL 2 HO4 polymer 1 1 59 ? ? ? 
PRD_900049 "H6'"  H20 H 0 1 N N N 22.824 63.528 46.422 -4.027 -4.811 -0.922 GAL 2 HO6 polymer 1 1 60 ? ? ? 
PRD_900049 HBQ    H11 H 0 1 N N N 14.811 61.364 45.637 3.575  -1.786 0.696  FUC 3 H1  polymer 1 1 61 ? ? ? 
PRD_900049 HBO    H2  H 0 1 N N N 12.480 62.087 45.647 5.164  0.099  0.597  FUC 3 H2  polymer 1 1 62 ? ? ? 
PRD_900049 HBN    H3  H 0 1 N N N 13.489 64.678 46.903 2.942  1.530  -0.934 FUC 3 H3  polymer 1 1 63 ? ? ? 
PRD_900049 HBL    H5  H 0 1 N N N 12.811 65.771 44.848 2.876  3.041  1.013  FUC 3 H4  polymer 1 1 64 ? ? ? 
PRD_900049 HBH    H7  H 0 1 N N N 15.095 64.921 44.939 1.374  1.085  1.019  FUC 3 H5  polymer 1 1 65 ? ? ? 
PRD_900049 HAC1   H10 H 0 1 N N N 14.356 66.001 42.850 2.672  1.646  3.723  FUC 3 H61 polymer 1 1 66 ? ? ? 
PRD_900049 HAC2   H8  H 0 1 N N N 15.548 64.702 42.507 1.327  2.552  2.989  FUC 3 H62 polymer 1 1 67 ? ? ? 
PRD_900049 HAC3   H9  H 0 1 N N N 13.799 64.416 42.213 1.090  0.863  3.496  FUC 3 H63 polymer 1 1 68 ? ? ? 
PRD_900049 HAL    H1  H 0 1 N N N 13.402 61.232 47.614 5.018  -1.329 -1.313 FUC 3 HO2 polymer 1 1 69 ? ? ? 
PRD_900049 HAK    H4  H 0 1 N N N 11.221 65.194 46.651 5.174  2.090  -1.581 FUC 3 HO3 polymer 1 1 70 ? ? ? 
PRD_900049 HAI    H6  H 0 1 N N N 12.086 64.421 43.080 4.202  2.510  2.884  FUC 3 HO4 polymer 1 1 71 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900049 OAL   CBO    SING N N 1  
PRD_900049 CBO   CBN    SING N N 2  
PRD_900049 CBO   CBQ    SING N N 3  
PRD_900049 CBN   OAK    SING N N 4  
PRD_900049 CBN   CBL    SING N N 5  
PRD_900049 CBL   OAI    SING N N 6  
PRD_900049 CBL   CBH    SING N N 7  
PRD_900049 CBH   CAC    SING N N 8  
PRD_900049 CBH   OBB    SING N N 9  
PRD_900049 OBB   CBQ    SING N N 10 
PRD_900049 CBQ   "O2'"  SING N N 11 
PRD_900049 "O2'" "C2'"  SING N N 12 
PRD_900049 "C2'" "C3'"  SING N N 13 
PRD_900049 "C2'" "C1'"  SING N N 14 
PRD_900049 "C3'" "O3'"  SING N N 15 
PRD_900049 "C3'" "C4'"  SING N N 16 
PRD_900049 "C4'" "O4'"  SING N N 17 
PRD_900049 "C4'" "C5'"  SING N N 18 
PRD_900049 "C5'" "C6'"  SING N N 19 
PRD_900049 "C5'" "O5'"  SING N N 20 
PRD_900049 "C6'" "O6'"  SING N N 21 
PRD_900049 "O5'" "C1'"  SING N N 22 
PRD_900049 "C1'" "O1'"  SING N N 23 
PRD_900049 "O1'" CBV    SING N N 24 
PRD_900049 CBV   CBU    SING N N 25 
PRD_900049 CBV   CBS    SING N N 26 
PRD_900049 CBU   OAE    SING N N 27 
PRD_900049 CBU   CBK    SING N N 28 
PRD_900049 CBK   OBA    SING N N 29 
PRD_900049 CBK   CAV    SING N N 30 
PRD_900049 CAV   OAG    SING N N 31 
PRD_900049 OBA   CBI    SING N N 32 
PRD_900049 CBI   CBS    SING N N 33 
PRD_900049 CBI   OAH    SING N N 34 
PRD_900049 CBS   NAX    SING N N 35 
PRD_900049 NAX   CBF    SING N N 36 
PRD_900049 CBF   CAB    SING N N 37 
PRD_900049 CBF   OAD    DOUB N N 38 
PRD_900049 OAL   HAL    SING N N 39 
PRD_900049 CBO   HBO    SING N N 40 
PRD_900049 CBN   HBN    SING N N 41 
PRD_900049 OAK   HAK    SING N N 42 
PRD_900049 CBL   HBL    SING N N 43 
PRD_900049 OAI   HAI    SING N N 44 
PRD_900049 CBH   HBH    SING N N 45 
PRD_900049 CAC   HAC2   SING N N 46 
PRD_900049 CAC   HAC3   SING N N 47 
PRD_900049 CAC   HAC1   SING N N 48 
PRD_900049 CBQ   HBQ    SING N N 49 
PRD_900049 "C2'" "H2'"  SING N N 50 
PRD_900049 "C3'" "H3'"  SING N N 51 
PRD_900049 "O3'" H2     SING N N 52 
PRD_900049 "C4'" "H4'"  SING N N 53 
PRD_900049 "O4'" H1     SING N N 54 
PRD_900049 "C5'" "H5'"  SING N N 55 
PRD_900049 "C6'" "H6'1" SING N N 56 
PRD_900049 "C6'" "H6'2" SING N N 57 
PRD_900049 "O6'" "H6'"  SING N N 58 
PRD_900049 "C1'" "H1'"  SING N N 59 
PRD_900049 CBV   HBV    SING N N 60 
PRD_900049 CBU   HBU    SING N N 61 
PRD_900049 OAE   HAE    SING N N 62 
PRD_900049 CBK   HBK    SING N N 63 
PRD_900049 CAV   HAV1   SING N N 64 
PRD_900049 CAV   HAV2   SING N N 65 
PRD_900049 OAG   HAG    SING N N 66 
PRD_900049 CBI   HBI    SING N N 67 
PRD_900049 OAH   HAH    SING N N 68 
PRD_900049 CBS   HBS    SING N N 69 
PRD_900049 NAX   HAX    SING N N 70 
PRD_900049 CAB   HAB1   SING N N 71 
PRD_900049 CAB   HAB2   SING N N 72 
PRD_900049 CAB   HAB3   SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900049 SMILES           ACDLabs              12.01 "O=C(NC3C(OC2OC(C(O)C(O)C2OC1OC(C)C(O)C(O)C1O)CO)C(O)C(OC3O)CO)C"                                                                                                                                                                             
PRD_900049 InChI            InChI                1.03  
;InChI=1S/C20H35NO15/c1-5-10(25)13(28)15(30)19(32-5)36-17-14(29)11(26)7(3-22)34-20(17)35-16-9(21-6(2)24)18(31)33-8(4-23)
 12(16)27/h5,7-20,22-23,25-31H,3-4H2,1-2H3,(H,21,24)/t5-,7+,8+,9+,10+,11-,12+,13+,14-,15-,16+,17+,18+,19-,20-/m0/s1
;
PRD_900049 InChIKey         InChI                1.03  MGSDFCKWGHNUSM-QVPNGJTFSA-N                                                                                                                                                                                                                   
PRD_900049 SMILES_CANONICAL CACTVS               3.370 
;C[C@@H]1O[C@@H](O[C@@H]2[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]2O[C@H]3[C@H](O)[C@@H](CO)O[C@@H](O)[C@@H]3NC(C)=O)[C@@H](O)[
 C@H](O)[C@@H]1O
;
PRD_900049 SMILES           CACTVS               3.370 "C[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](CO)O[CH]2O[CH]3[CH](O)[CH](CO)O[CH](O)[CH]3NC(C)=O)[CH](O)[CH](O)[CH]1O"                                                                                                                                
PRD_900049 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3O)CO)O)NC(=O)C)CO)O)O)O)O)O"                                                                                                                                                                           
PRD_900049 SMILES           "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3O)CO)O)NC(=O)C)CO)O)O)O)O)O"                                                                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_900049 "SYSTEMATIC NAME" ACDLabs              12.01 "6-deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranose"                                            
PRD_900049 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
;N-[6-(hydroxymethyl)-4-[6-(hydroxymethyl)-3-[6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-
 2,5-bis(oxidanyl)oxan-3-yl]ethanamide
;
# 
