data_PRDCC_900069
# 
_chem_comp.id                                    PRD_900069 
_chem_comp.name                                  "6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose" 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C12 H23 O14 P" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        422.276 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900069 "C2'" C8  C 0 1 N N R -0.703 10.870 29.881 -5.549 0.631  0.207  BGC 1 C2   polymer 1 1 1  ? ? ? 
PRD_900069 "C3'" C11 C 0 1 N N S 0.348  10.021 30.154 -4.637 1.767  -0.267 BGC 1 C3   polymer 1 1 2  ? ? ? 
PRD_900069 "C4'" C10 C 0 1 N N S -0.044 8.632  29.959 -3.220 1.523  0.259  BGC 1 C4   polymer 1 1 3  ? ? ? 
PRD_900069 "C5'" C9  C 0 1 N N R -0.524 8.436  28.559 -2.735 0.152  -0.218 BGC 1 C5   polymer 1 1 4  ? ? ? 
PRD_900069 "C6'" C12 C 0 1 N N N -0.842 6.985  28.364 -1.343 -0.124 0.353  BGC 1 C6   polymer 1 1 5  ? ? ? 
PRD_900069 "C1'" C7  C 0 1 N N R -1.343 10.612 28.500 -4.974 -0.706 -0.268 BGC 1 C1   polymer 1 1 6  ? ? ? 
PRD_900069 "O1'" O10 O 0 1 N N N -2.503 11.328 28.374 -5.788 -1.775 0.218  BGC 1 O1   polymer 1 1 7  ? ? ? 
PRD_900069 "O2'" O11 O 0 1 N N N -0.240 12.243 29.977 -6.857 0.808  -0.338 BGC 1 O2   polymer 1 1 8  ? ? ? 
PRD_900069 "O3'" O14 O 0 1 N N N 0.816  10.209 31.557 -5.126 3.013  0.234  BGC 1 O3   polymer 1 1 9  ? ? ? 
PRD_900069 "O4'" O13 O 0 1 N N N 1.041  7.781  30.216 -2.345 2.539  -0.237 BGC 1 O4   polymer 1 1 10 ? ? ? 
PRD_900069 "O5'" O12 O 0 1 N N N -1.631 9.247  28.259 -3.643 -0.856 0.231  BGC 1 O5   polymer 1 1 11 ? ? ? 
PRD_900069 O1    O6  O 0 1 N N N 0.269  6.161  28.409 -0.842 -1.350 -0.184 BGC 1 O6   polymer 1 1 12 ? ? ? 
PRD_900069 C1    C1  C 0 1 N N R 0.300  4.929  27.745 0.460  -1.703 0.288  BG6 2 C1   polymer 1 1 13 ? ? ? 
PRD_900069 C2    C2  C 0 1 N N R -1.068 4.528  27.252 0.841  -3.085 -0.251 BG6 2 C2   polymer 1 1 14 ? ? ? 
PRD_900069 O5    O5  O 0 1 N N N 1.266  4.949  26.720 1.409  -0.737 -0.166 BG6 2 O5   polymer 1 1 15 ? ? ? 
PRD_900069 C3    C3  C 0 1 N N S -1.066 4.294  25.857 2.260  -3.430 0.210  BG6 2 C3   polymer 1 1 16 ? ? ? 
PRD_900069 O2    O9  O 0 1 N N N -1.473 3.353  27.936 -0.074 -4.062 0.250  BG6 2 O2   polymer 1 1 17 ? ? ? 
PRD_900069 C4    C4  C 0 1 N N S -0.540 5.421  25.169 3.220  -2.335 -0.266 BG6 2 C4   polymer 1 1 18 ? ? ? 
PRD_900069 O3    O8  O 0 1 N N N -2.424 3.949  25.418 2.652  -4.686 -0.347 BG6 2 O3   polymer 1 1 19 ? ? ? 
PRD_900069 C5    C5  C 0 1 N N R 0.882  5.708  25.596 2.747  -0.982 0.273  BG6 2 C5   polymer 1 1 20 ? ? ? 
PRD_900069 O4    O7  O 0 1 N N N -0.553 5.253  23.733 4.536  -2.608 0.219  BG6 2 O4   polymer 1 1 21 ? ? ? 
PRD_900069 C6    C6  C 0 1 N N N 1.039  7.166  25.905 3.666  0.125  -0.247 BG6 2 C6   polymer 1 1 22 ? ? ? 
PRD_900069 O6    O4  O 0 1 N N N 1.623  8.020  24.967 3.296  1.370  0.348  BG6 2 O6   polymer 1 1 23 ? ? ? 
PRD_900069 P     P1  P 0 1 N N N 0.712  8.695  23.879 4.052  2.754  0.027  BG6 2 P    polymer 1 1 24 ? ? ? 
PRD_900069 O1P   O2  O 0 1 N N N 1.581  9.628  23.087 3.826  3.144  -1.519 BG6 2 O1P  polymer 1 1 25 ? ? ? 
PRD_900069 O3P   O1  O 0 1 N N N -0.409 9.499  24.539 3.460  3.920  0.966  BG6 2 O2P  polymer 1 1 26 ? ? ? 
PRD_900069 O2P   O3  O 0 1 N N N 0.137  7.617  22.964 5.501  2.598  0.289  BG6 2 O3P  polymer 1 1 27 ? ? ? 
PRD_900069 H15   H15 H 0 1 N N N -1.491 10.721 30.634 -5.603 0.637  1.296  BGC 1 H2   polymer 1 1 28 ? ? ? 
PRD_900069 H20   H20 H 0 1 N N N 1.188  10.245 29.481 -4.623 1.791  -1.357 BGC 1 H3   polymer 1 1 29 ? ? ? 
PRD_900069 H18   H18 H 0 1 N N N -0.870 8.395  30.646 -3.226 1.548  1.349  BGC 1 H4   polymer 1 1 30 ? ? ? 
PRD_900069 H17   H17 H 0 1 N N N 0.303  8.693  27.880 -2.690 0.141  -1.307 BGC 1 H5   polymer 1 1 31 ? ? ? 
PRD_900069 H22   H22 H 0 1 N N N -1.325 6.864  27.383 -1.404 -0.201 1.439  BGC 1 H6C1 polymer 1 1 32 ? ? ? 
PRD_900069 H23   H23 H 0 1 N N N -1.538 6.673  29.156 -0.671 0.691  0.084  BGC 1 H6C2 polymer 1 1 33 ? ? ? 
PRD_900069 H13   H13 H 0 1 N N N -0.622 10.956 27.744 -4.958 -0.728 -1.358 BGC 1 H1   polymer 1 1 34 ? ? ? 
PRD_900069 H14   H14 H 0 1 N N N -2.327 12.248 28.533 -5.482 -2.654 -0.045 BGC 1 HA   polymer 1 1 35 ? ? ? 
PRD_900069 H16   H16 H 0 1 N N N 0.151  12.387 30.831 -7.487 0.121  -0.082 BGC 1 HB   polymer 1 1 36 ? ? ? 
PRD_900069 H21   H21 H 0 1 N N N 1.540  9.619  31.732 -6.024 3.228  -0.054 BGC 1 HC   polymer 1 1 37 ? ? ? 
PRD_900069 H19   H19 H 0 1 N N N 1.341  7.911  31.108 -2.593 3.435  0.027  BGC 1 HD   polymer 1 1 38 ? ? ? 
PRD_900069 H1    H1  H 0 1 N N N 0.604  4.163  28.474 0.457  -1.726 1.378  BG6 2 HC1  polymer 1 1 39 ? ? ? 
PRD_900069 H2    H2  H 0 1 N N N -1.768 5.344  27.484 0.803  -3.074 -1.340 BG6 2 HC2  polymer 1 1 40 ? ? ? 
PRD_900069 H3    H3  H 0 1 N N N -0.418 3.430  25.651 2.286  -3.489 1.298  BG6 2 HC3  polymer 1 1 41 ? ? ? 
PRD_900069 H12   H12 H 0 1 N N N -1.473 3.515  28.872 -0.995 -3.903 -0.000 BG6 2 HO2  polymer 1 1 42 ? ? ? 
PRD_900069 H4    H4  H 0 1 N N N -1.147 6.303  25.421 3.231  -2.308 -1.356 BG6 2 HC4  polymer 1 1 43 ? ? ? 
PRD_900069 H11   H11 H 0 1 N N N -2.732 3.193  25.904 2.082  -5.424 -0.091 BG6 2 HO3  polymer 1 1 44 ? ? ? 
PRD_900069 H5    H5  H 0 1 N N N 1.544  5.465  24.752 2.775  -0.996 1.363  BG6 2 HC5  polymer 1 1 45 ? ? ? 
PRD_900069 H10   H10 H 0 1 N N N -0.311 6.071  23.316 4.899  -3.451 -0.084 BG6 2 HO4  polymer 1 1 46 ? ? ? 
PRD_900069 H6    H6  H 0 1 N N N 1.649  7.233  26.818 4.699  -0.109 0.011  BG6 2 HC61 polymer 1 1 47 ? ? ? 
PRD_900069 H7    H7  H 0 1 N N N 0.031  7.558  26.107 3.570  0.197  -1.331 BG6 2 HC62 polymer 1 1 48 ? ? ? 
PRD_900069 H9    H9  H 0 1 N N N 1.594  9.354  22.177 2.898  3.263  -1.763 BG6 2 H1O1 polymer 1 1 49 ? ? ? 
PRD_900069 H8    H8  H 0 1 N N N -1.250 9.168  24.248 3.871  4.785  0.826  BG6 2 H2O2 polymer 1 1 50 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900069 O2P   P     DOUB N N 1  
PRD_900069 O1P   P     SING N N 2  
PRD_900069 O4    C4    SING N N 3  
PRD_900069 P     O3P   SING N N 4  
PRD_900069 P     O6    SING N N 5  
PRD_900069 O6    C6    SING N N 6  
PRD_900069 C4    C5    SING N N 7  
PRD_900069 C4    C3    SING N N 8  
PRD_900069 O3    C3    SING N N 9  
PRD_900069 C5    C6    SING N N 10 
PRD_900069 C5    O5    SING N N 11 
PRD_900069 C3    C2    SING N N 12 
PRD_900069 O5    C1    SING N N 13 
PRD_900069 C2    C1    SING N N 14 
PRD_900069 C2    O2    SING N N 15 
PRD_900069 C1    O1    SING N N 16 
PRD_900069 "O5'" "C1'" SING N N 17 
PRD_900069 "O5'" "C5'" SING N N 18 
PRD_900069 "C6'" O1    SING N N 19 
PRD_900069 "C6'" "C5'" SING N N 20 
PRD_900069 "O1'" "C1'" SING N N 21 
PRD_900069 "C1'" "C2'" SING N N 22 
PRD_900069 "C5'" "C4'" SING N N 23 
PRD_900069 "C2'" "O2'" SING N N 24 
PRD_900069 "C2'" "C3'" SING N N 25 
PRD_900069 "C4'" "C3'" SING N N 26 
PRD_900069 "C4'" "O4'" SING N N 27 
PRD_900069 "C3'" "O3'" SING N N 28 
PRD_900069 C1    H1    SING N N 29 
PRD_900069 C2    H2    SING N N 30 
PRD_900069 C3    H3    SING N N 31 
PRD_900069 C4    H4    SING N N 32 
PRD_900069 C5    H5    SING N N 33 
PRD_900069 C6    H6    SING N N 34 
PRD_900069 C6    H7    SING N N 35 
PRD_900069 O3P   H8    SING N N 36 
PRD_900069 O1P   H9    SING N N 37 
PRD_900069 O4    H10   SING N N 38 
PRD_900069 O3    H11   SING N N 39 
PRD_900069 O2    H12   SING N N 40 
PRD_900069 "C1'" H13   SING N N 41 
PRD_900069 "O1'" H14   SING N N 42 
PRD_900069 "C2'" H15   SING N N 43 
PRD_900069 "O2'" H16   SING N N 44 
PRD_900069 "C5'" H17   SING N N 45 
PRD_900069 "C4'" H18   SING N N 46 
PRD_900069 "O4'" H19   SING N N 47 
PRD_900069 "C3'" H20   SING N N 48 
PRD_900069 "O3'" H21   SING N N 49 
PRD_900069 "C6'" H22   SING N N 50 
PRD_900069 "C6'" H23   SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900069 SMILES           ACDLabs              12.01 "C2(OCC1OC(C(O)C(C1O)O)O)C(O)C(C(C(COP(O)(O)=O)O2)O)O"                                                                                                                   
PRD_900069 InChI            InChI                1.03  
;InChI=1S/C12H23O14P/c13-5-3(25-11(19)9(17)7(5)15)1-23-12-10(18)8(16)6(14)4(26-12)2-24-27(20,21)22/h3-19H,1-2H2,(H2,20,2
 1,22)/t3-,4-,5-,6-,7+,8+,9-,10-,11-,12-/m1/s1
;
PRD_900069 InChIKey         InChI                1.03  MPJUWDDYGSGMFC-LIZSDCNHSA-N                                                                                                                                              
PRD_900069 SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1O[C@H](CO[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@H]1O"                                                                         
PRD_900069 SMILES           CACTVS               3.385 "O[CH]1O[CH](CO[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O"                                                                                       
PRD_900069 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)O"                                                                    
PRD_900069 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)O)OC2C(C(C(C(O2)COP(=O)(O)O)O)O)O"                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_900069 "SYSTEMATIC NAME" ACDLabs              12.01 "6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose"                                                                                                                
PRD_900069 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 
;[(2~{R},3~{S},4~{S},5~{R},6~{R})-3,4,5-tris(oxidanyl)-6-[[(2~{R},3~{S},4~{S},5~{R},6~{R})-3,4,5,6-tetrakis(oxidanyl)oxa
 n-2-yl]methoxy]oxan-2-yl]methyl dihydrogen phosphate
;
# 
