data_HE0
#

_chem_comp.id                                   HE0
_chem_comp.name                                 "(2R,4S)-2-[(1R)-1-{[(6S)-6-carboxy-6-(glycylamino)hexanoyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H28 N4 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Penicillin analog, bound/open form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-02-28
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       432.492
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    HE0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1PWG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HE0  S1    S1    S  0  1  N  N  N  18.281  -12.643  41.419  -4.279  -1.398   0.290  S1    HE0   1  
HE0  C2    C2    C  0  1  N  N  N  18.939  -10.945  41.664  -6.075  -1.292  -0.078  C2    HE0   2  
HE0  C3    C3    C  0  1  N  N  S  18.215   -9.962  40.700  -6.379   0.213   0.045  C3    HE0   3  
HE0  N4    N4    N  0  1  N  N  N  17.003  -10.658  40.378  -5.219   0.995   0.483  N4    HE0   4  
HE0  C5    C5    C  0  1  N  N  R  16.857  -12.088  40.445  -3.951   0.389  -0.012  C5    HE0   5  
HE0  C6    C6    C  0  1  N  N  R  16.714  -12.638  39.010  -2.752   0.876   0.804  C6    HE0   6  
HE0  C7    C7    C  0  1  N  N  N  16.362  -11.463  38.164  -2.938   0.491   2.249  C7    HE0   7  
HE0  N8    N8    N  0  1  N  N  N  17.889  -13.231  38.416  -1.528   0.259   0.288  N8    HE0   8  
HE0  C9    C9    C  0  1  N  N  N  18.229  -14.493  38.764  -0.338   0.867   0.469  C9    HE0   9  
HE0  O10   O10   O  0  1  N  N  N  17.563  -15.174  39.510  -0.282   1.925   1.059  O10   HE0  10  
HE0  C11   C11   C  0  1  N  N  N  19.585  -14.900  38.291   0.921   0.232  -0.062  C11   HE0  11  
HE0  C12   C12   C  0  1  N  N  N  19.651  -16.233  37.580   2.121   1.120   0.276  C12   HE0  12  
HE0  C13   C13   C  0  1  N  N  N  21.058  -16.787  37.503   3.399   0.475  -0.263  C13   HE0  13  
HE0  C14   C14   C  0  1  N  N  N  22.025  -15.752  36.891   4.599   1.363   0.074  C14   HE0  14  
HE0  C15   C15   C  0  1  N  N  S  23.450  -16.294  36.705   5.878   0.719  -0.465  C15   HE0  15  
HE0  C16   C16   C  0  1  N  N  N  24.262  -15.251  35.975   7.042   1.649  -0.242  C16   HE0  16  
HE0  O17   O17   O  0  1  N  N  N  24.135  -15.173  34.773   7.979   1.294   0.434  O17   HE0  17  
HE0  O18   O18   O  0  1  N  N  N  24.979  -14.424  36.728   7.038   2.873  -0.793  O18   HE0  18  
HE0  N19   N19   N  0  1  N  N  N  24.001  -16.707  37.981   6.121  -0.544   0.237  N19   HE0  19  
HE0  C20   C20   C  0  1  N  N  N  24.515  -17.932  38.191   6.844  -1.515  -0.355  C20   HE0  20  
HE0  O21   O21   O  0  1  N  N  N  24.579  -18.814  37.365   7.294  -1.344  -1.469  O21   HE0  21  
HE0  C22   C22   C  0  1  N  N  N  25.053  -18.134  39.566   7.095  -2.815   0.366  C22   HE0  22  
HE0  N23   N23   N  0  1  N  N  N  25.848  -19.378  39.631   7.901  -3.700  -0.485  N23   HE0  23  
HE0  C24   C24   C  0  1  N  N  N  18.494  -10.412  43.054  -6.364  -1.786  -1.497  C24   HE0  24  
HE0  C25   C25   C  0  1  N  N  N  20.446  -10.924  41.592  -6.883  -2.094   0.944  C25   HE0  25  
HE0  C26   C26   C  0  1  N  N  N  17.810   -8.420  40.962  -6.834   0.729  -1.297  C26   HE0  26  
HE0  O27   O27   O  0  1  N  N  N  16.665   -8.194  41.446  -8.099   0.532  -1.697  O27   HE0  27  
HE0  O28   O28   O  0  1  N  N  N  18.789   -7.722  41.163  -6.059   1.319  -2.011  O28   HE0  28  
HE0  O29   O29   O  0  1  N  N  N  17.047  -10.864  37.406  -2.131  -0.225   2.792  O29   HE0  29  
HE0  H3    H3    H  0  1  N  N  N  18.825   -9.943  39.785  -7.186   0.351   0.765  H3    HE0  30  
HE0  HN4   HN4   H  0  1  N  N  N  16.305  -10.285  40.989  -5.299   1.957   0.189  HN4   HE0  31  
HE0  H5    H5    H  0  1  N  N  N  15.963  -12.359  41.026  -3.809   0.588  -1.074  H5    HE0  32  
HE0  H6    H6    H  0  1  N  N  N  15.883  -13.358  38.993  -2.674   1.960   0.724  H6    HE0  33  
HE0  H7    H7    H  0  1  N  N  N  15.345  -11.110  38.254  -3.793   0.855   2.799  H7    HE0  34  
HE0  HN8   HN8   H  0  1  N  N  N  18.441  -12.718  37.759  -1.572  -0.588  -0.183  HN8   HE0  35  
HE0  H11   H11   H  0  1  N  N  N  19.949  -14.127  37.598   1.054  -0.748   0.396  H11   HE0  36  
HE0  H11A  H11A  H  0  0  N  N  N  20.249  -14.949  39.166   0.844   0.121  -1.143  H11A  HE0  37  
HE0  H12   H12   H  0  1  N  N  N  19.019  -16.952  38.122   1.987   2.100  -0.182  H12   HE0  38  
HE0  H12A  H12A  H  0  0  N  N  N  19.267  -16.105  36.557   2.198   1.231   1.357  H12A  HE0  39  
HE0  H13   H13   H  0  1  N  N  N  21.400  -17.044  38.517   3.533  -0.505   0.194  H13   HE0  40  
HE0  H13A  H13A  H  0  0  N  N  N  21.055  -17.691  36.877   3.322   0.364  -1.345  H13A  HE0  41  
HE0  H14   H14   H  0  1  N  N  N  21.635  -15.447  35.908   4.466   2.343  -0.383  H14   HE0  42  
HE0  H14A  H14A  H  0  0  N  N  N  22.068  -14.877  37.556   4.676   1.474   1.156  H14A  HE0  43  
HE0  H15   H15   H  0  1  N  N  N  23.382  -17.178  36.054   5.766   0.526  -1.532  H15   HE0  44  
HE0  HO18  HO18  H  0  0  N  N  N  25.378  -13.760  36.178   7.807   3.434  -0.622  HO18  HE0  45  
HE0  HN19  HN19  H  0  0  N  N  N  23.999  -16.053  38.737   5.762  -0.682   1.127  HN19  HE0  46  
HE0  H22   H22   H  0  1  N  N  N  25.693  -17.280  39.834   7.629  -2.617   1.295  H22   HE0  47  
HE0  H22A  H22A  H  0  0  N  N  N  24.216  -18.201  40.276   6.142  -3.295   0.590  H22A  HE0  48  
HE0  HN23  HN23  H  0  0  N  N  N  26.202  -19.500  40.558   8.762  -3.251  -0.760  HN23  HE0  49  
HE0  HN2A  HN2A  H  0  0  N  N  N  25.269  -20.157  39.390   8.083  -4.578  -0.023  HN2A  HE0  50  
HE0  H24   H24   H  0  1  N  N  N  18.888   -9.395  43.201  -6.068  -2.831  -1.586  H24   HE0  51  
HE0  H24A  H24A  H  0  0  N  N  N  17.395  -10.390  43.104  -7.429  -1.691  -1.706  H24A  HE0  52  
HE0  H24B  H24B  H  0  0  N  N  N  18.883  -11.073  43.842  -5.799  -1.187  -2.212  H24B  HE0  53  
HE0  H25   H25   H  0  1  N  N  N  20.806   -9.896  41.742  -6.684  -1.711   1.945  H25   HE0  54  
HE0  H25A  H25A  H  0  0  N  N  N  20.860  -11.576  42.376  -7.946  -1.997   0.723  H25A  HE0  55  
HE0  H25B  H25B  H  0  0  N  N  N  20.771  -11.286  40.605  -6.595  -3.144   0.892  H25B  HE0  56  
HE0  HO27  HO27  H  0  0  N  N  N  16.696   -7.408  41.979  -8.344   0.880  -2.566  HO27  HE0  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HE0  C5   S1    SING  N  N   1  
HE0  S1   C2    SING  N  N   2  
HE0  C3   C2    SING  N  N   3  
HE0  C25  C2    SING  N  N   4  
HE0  C2   C24   SING  N  N   5  
HE0  N4   C3    SING  N  N   6  
HE0  C3   C26   SING  N  N   7  
HE0  C3   H3    SING  N  N   8  
HE0  N4   C5    SING  N  N   9  
HE0  N4   HN4   SING  N  N  10  
HE0  C6   C5    SING  N  N  11  
HE0  C5   H5    SING  N  N  12  
HE0  C7   C6    SING  N  N  13  
HE0  N8   C6    SING  N  N  14  
HE0  C6   H6    SING  N  N  15  
HE0  O29  C7    DOUB  N  N  16  
HE0  C7   H7    SING  N  N  17  
HE0  N8   C9    SING  N  N  18  
HE0  N8   HN8   SING  N  N  19  
HE0  C11  C9    SING  N  N  20  
HE0  C9   O10   DOUB  N  N  21  
HE0  C12  C11   SING  N  N  22  
HE0  C11  H11   SING  N  N  23  
HE0  C11  H11A  SING  N  N  24  
HE0  C13  C12   SING  N  N  25  
HE0  C12  H12   SING  N  N  26  
HE0  C12  H12A  SING  N  N  27  
HE0  C14  C13   SING  N  N  28  
HE0  C13  H13   SING  N  N  29  
HE0  C13  H13A  SING  N  N  30  
HE0  C15  C14   SING  N  N  31  
HE0  C14  H14   SING  N  N  32  
HE0  C14  H14A  SING  N  N  33  
HE0  C16  C15   SING  N  N  34  
HE0  C15  N19   SING  N  N  35  
HE0  C15  H15   SING  N  N  36  
HE0  O17  C16   DOUB  N  N  37  
HE0  C16  O18   SING  N  N  38  
HE0  O18  HO18  SING  N  N  39  
HE0  N19  C20   SING  N  N  40  
HE0  N19  HN19  SING  N  N  41  
HE0  O21  C20   DOUB  N  N  42  
HE0  C20  C22   SING  N  N  43  
HE0  C22  N23   SING  N  N  44  
HE0  C22  H22   SING  N  N  45  
HE0  C22  H22A  SING  N  N  46  
HE0  N23  HN23  SING  N  N  47  
HE0  N23  HN2A  SING  N  N  48  
HE0  C24  H24   SING  N  N  49  
HE0  C24  H24A  SING  N  N  50  
HE0  C24  H24B  SING  N  N  51  
HE0  C25  H25   SING  N  N  52  
HE0  C25  H25A  SING  N  N  53  
HE0  C25  H25B  SING  N  N  54  
HE0  C26  O28   DOUB  N  N  55  
HE0  C26  O27   SING  N  N  56  
HE0  O27  HO27  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HE0  SMILES            ACDLabs               12.01  "O=C(NC(C=O)C1SC(C(N1)C(=O)O)(C)C)CCCCC(C(=O)O)NC(=O)CN"  
HE0  InChI             InChI                 1.03   "InChI=1S/C17H28N4O7S/c1-17(2)13(16(27)28)21-14(29-17)10(8-22)20-11(23)6-4-3-5-9(15(25)26)19-12(24)7-18/h8-10,13-14,21H,3-7,18H2,1-2H3,(H,19,24)(H,20,23)(H,25,26)(H,27,28)/t9-,10+,13-,14+/m0/s1"  
HE0  InChIKey          InChI                 1.03   GWAZTQMEPPXKKK-GIFSMMMISA-N  
HE0  SMILES_CANONICAL  CACTVS                3.370  "CC1(C)S[C@@H](N[C@H]1C(O)=O)[C@H](NC(=O)CCCC[C@H](NC(=O)CN)C(O)=O)C=O"  
HE0  SMILES            CACTVS                3.370  "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)CCCC[CH](NC(=O)CN)C(O)=O)C=O"  
HE0  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)CCCC[C@@H](C(=O)O)NC(=O)CN)C(=O)O)C"  
HE0  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1(C(NC(S1)C(C=O)NC(=O)CCCCC(C(=O)O)NC(=O)CN)C(=O)O)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
HE0  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R,4S)-2-[(1R)-1-{[(6S)-6-carboxy-6-(glycylamino)hexanoyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"  
HE0  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,4S)-2-[(1R)-1-[[(6S)-6-(2-azanylethanoylamino)-7-oxidanyl-7-oxidanylidene-heptanoyl]amino]-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HE0  "Create component"  2012-02-28  RCSB  
HE0  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     HE0
_pdbx_chem_comp_synonyms.name        "Penicillin analog, bound/open form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
