data_XC0
# 
_chem_comp.id                                    XC0 
_chem_comp.name                                  "(2S)-2-aminooctanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H17 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-10 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        159.226 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XC0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8F1F 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XC0 C2  C2  C 0 1 N N N N N N 19.047 -4.665 12.471 5.609  0.064  -0.139 C2  XC0 1  
XC0 N   N   N 0 1 N N N Y Y N 16.708 -6.734 5.338  -1.892 1.796  -0.184 N   XC0 2  
XC0 CA  CA  C 0 1 N N S Y N N 15.699 -6.006 6.005  -1.873 0.358  -0.481 CA  XC0 3  
XC0 CB  CB  C 0 1 N N N N N N 15.633 -6.247 7.505  -0.679 -0.292 0.221  CB  XC0 4  
XC0 CG  CG  C 0 1 N N N N N N 16.783 -5.654 8.317  0.621  0.260  -0.367 CG  XC0 5  
XC0 CD  CD  C 0 1 N N N N N N 16.679 -6.047 9.782  1.815  -0.391 0.335  CD  XC0 6  
XC0 CE  CE  C 0 1 N N N N N N 17.925 -5.526 10.464 3.115  0.162  -0.253 CE  XC0 7  
XC0 C   C   C 0 1 N N N Y N Y 15.898 -4.532 5.749  -3.150 -0.274 0.011  C   XC0 8  
XC0 O   O   O 0 1 N N N Y N Y 16.970 -4.212 5.442  -3.816 0.285  0.849  O   XC0 9  
XC0 C1  C1  C 0 1 N N N N N N 17.724 -5.145 11.912 4.309  -0.489 0.449  C1  XC0 10 
XC0 OXT O1  O 0 1 N Y N Y N Y 14.923 -3.680 6.025  -3.547 -1.457 -0.483 O1  XC0 11 
XC0 H1  H1  H 0 1 N N N N N N 18.919 -4.383 13.526 5.649  -0.159 -1.205 H1  XC0 12 
XC0 H4  H2  H 0 1 N N N N N N 19.791 -5.471 12.395 5.644  1.143  0.008  H2  XC0 13 
XC0 H3  H3  H 0 1 N N N N N N 19.392 -3.792 11.898 6.459  -0.400 0.361  H3  XC0 14 
XC0 H   H4  H 0 1 N N N Y Y N 16.580 -7.712 5.505  -1.972 1.959  0.809  H4  XC0 15 
XC0 H2  H5  H 0 1 N Y N Y Y N 16.655 -6.554 4.356  -1.076 2.254  -0.560 H5  XC0 16 
XC0 HA  H7  H 0 1 N N N Y N N 14.722 -6.287 5.584  -1.786 0.210  -1.558 H7  XC0 17 
XC0 H8  H8  H 0 1 N N N N N N 14.695 -5.810 7.878  -0.719 -0.070 1.287  H8  XC0 18 
XC0 H9  H9  H 0 1 N N N N N N 15.624 -7.334 7.674  -0.715 -1.372 0.074  H9  XC0 19 
XC0 H10 H10 H 0 1 N N N N N N 17.737 -6.024 7.913  0.661  0.037  -1.433 H10 XC0 20 
XC0 H11 H11 H 0 1 N N N N N N 16.752 -4.557 8.236  0.657  1.339  -0.220 H11 XC0 21 
XC0 H12 H12 H 0 1 N N N N N N 15.783 -5.595 10.233 1.775  -0.168 1.401  H12 XC0 22 
XC0 H13 H13 H 0 1 N N N N N N 16.625 -7.141 9.877  1.779  -1.470 0.188  H13 XC0 23 
XC0 H14 H14 H 0 1 N N N N N N 18.697 -6.308 10.417 3.155  -0.061 -1.319 H14 XC0 24 
XC0 H15 H15 H 0 1 N N N N N N 18.271 -4.636 9.918  3.151  1.241  -0.106 H15 XC0 25 
XC0 H16 H16 H 0 1 N N N N N N 16.977 -4.341 11.984 4.273  -1.568 0.302  H16 XC0 26 
XC0 H17 H17 H 0 1 N N N N N N 17.376 -6.020 12.481 4.269  -0.266 1.515  H17 XC0 27 
XC0 HXT H18 H 0 1 N Y N Y N Y 15.243 -2.790 5.931  -4.373 -1.823 -0.137 H18 XC0 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XC0 N   CA  SING N N 1  
XC0 O   C   DOUB N N 2  
XC0 C   CA  SING N N 3  
XC0 CA  CB  SING N N 4  
XC0 CB  CG  SING N N 5  
XC0 CG  CD  SING N N 6  
XC0 CD  CE  SING N N 7  
XC0 CE  C1  SING N N 8  
XC0 C1  C2  SING N N 9  
XC0 C   OXT SING N N 10 
XC0 C2  H1  SING N N 11 
XC0 C2  H4  SING N N 12 
XC0 C2  H3  SING N N 13 
XC0 N   H   SING N N 14 
XC0 N   H2  SING N N 15 
XC0 CA  HA  SING N N 16 
XC0 CB  H8  SING N N 17 
XC0 CB  H9  SING N N 18 
XC0 CG  H10 SING N N 19 
XC0 CG  H11 SING N N 20 
XC0 CD  H12 SING N N 21 
XC0 CD  H13 SING N N 22 
XC0 CE  H14 SING N N 23 
XC0 CE  H15 SING N N 24 
XC0 C1  H16 SING N N 25 
XC0 C1  H17 SING N N 26 
XC0 OXT HXT SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XC0 SMILES           ACDLabs              12.01 "NC(CCCCCC)C(=O)O"                                                               
XC0 InChI            InChI                1.06  "InChI=1S/C8H17NO2/c1-2-3-4-5-6-7(9)8(10)11/h7H,2-6,9H2,1H3,(H,10,11)/t7-/m0/s1" 
XC0 InChIKey         InChI                1.06  AKVBCGQVQXPRLD-ZETCQYMHSA-N                                                      
XC0 SMILES_CANONICAL CACTVS               3.385 "CCCCCC[C@H](N)C(O)=O"                                                           
XC0 SMILES           CACTVS               3.385 "CCCCCC[CH](N)C(O)=O"                                                            
XC0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC[C@@H](C(=O)O)N"                                                          
XC0 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCC(C(=O)O)N"                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XC0 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-2-aminooctanoic acid"     
XC0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyloctanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XC0 "Create component" 2022-11-10 RCSB 
XC0 "Initial release"  2023-11-01 RCSB 
XC0 "Modify backbone"  2023-11-03 PDBE 
# 
