data_DA2
# 
_chem_comp.id                                    DA2 
_chem_comp.name                                  NG,NG-DIMETHYL-L-ARGININE 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C8 H18 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ARG 
_chem_comp.pdbx_synonyms                         ADMA 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-27 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        202.254 
_chem_comp.one_letter_code                       R 
_chem_comp.three_letter_code                     DA2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7NSE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DA2 C1   C1   C 0 1 N N N N N N 8.598  10.722 30.463 5.583  -0.411 0.131  C1   DA2 1  
DA2 C2   C2   C 0 1 N N N N N N 6.373  10.928 29.252 4.267  1.633  -0.597 C2   DA2 2  
DA2 N    N    N 0 1 N N N Y Y N 7.914  15.793 35.383 -3.027 1.687  0.666  N    DA2 3  
DA2 CA   CA   C 0 1 N N S Y N N 8.433  16.305 34.086 -3.010 0.550  -0.265 CA   DA2 4  
DA2 CB   CB   C 0 1 N N N N N N 8.365  15.206 33.027 -1.827 -0.361 0.064  CB   DA2 5  
DA2 CG   CG   C 0 1 N N N N N N 9.119  13.946 33.407 -0.518 0.390  -0.192 CG   DA2 6  
DA2 CD   CD   C 0 1 N N N N N N 8.763  12.800 32.479 0.666  -0.521 0.137  CD   DA2 7  
DA2 NE   NE   N 0 1 N N N N N N 7.312  12.624 32.370 1.918  0.198  -0.108 NE   DA2 8  
DA2 CZ   CZ   C 0 1 N N N N N N 6.643  11.929 31.442 3.124  -0.424 0.119  CZ   DA2 9  
DA2 NH2  NH2  N 0 1 N N N N N N 5.317  11.924 31.524 3.152  -1.653 0.552  NH2  DA2 10 
DA2 NH1  NH1  N 0 1 N N N N N N 7.214  11.262 30.420 4.299  0.251  -0.111 NH1  DA2 11 
DA2 C    C    C 0 1 N N N Y N Y 7.634  17.515 33.613 -4.295 -0.227 -0.131 C    DA2 12 
DA2 O    O    O 0 1 N N N Y N Y 6.500  17.703 34.106 -4.968 -0.115 0.866  O    DA2 13 
DA2 OXT  OXT  O 0 1 N Y N Y N Y 8.149  18.255 32.747 -4.692 -1.042 -1.121 OXT  DA2 14 
DA2 HC11 HC11 H 0 0 N N N N N N 9.094  11.055 31.387 5.895  -0.234 1.160  HC11 DA2 15 
DA2 HC12 HC12 H 0 0 N N N N N N 8.563  9.623  30.442 5.477  -1.483 -0.038 HC12 DA2 16 
DA2 HC13 HC13 H 0 0 N N N N N N 9.161  11.088 29.592 6.333  -0.009 -0.550 HC13 DA2 17 
DA2 HC21 HC21 H 0 0 N N N N N N 5.384  11.397 29.365 4.266  1.634  -1.687 HC21 DA2 18 
DA2 HC22 HC22 H 0 0 N N N N N N 6.853  11.302 28.336 3.367  2.126  -0.232 HC22 DA2 19 
DA2 HC23 HC23 H 0 0 N N N N N N 6.255  9.836  29.185 5.146  2.166  -0.234 HC23 DA2 20 
DA2 H    HN1  H 0 1 N N N Y Y N 7.962  16.517 36.071 -3.761 2.337  0.430  HN1  DA2 21 
DA2 H2   HN2  H 0 1 N Y N Y Y N 6.964  15.502 35.270 -3.116 1.371  1.620  HN2  DA2 22 
DA2 HA   HCA  H 0 1 N N N Y N N 9.484  16.606 34.212 -2.913 0.919  -1.286 HCA  DA2 23 
DA2 HCB1 HCB1 H 0 0 N N N N N N 7.309  14.944 32.866 -1.876 -0.658 1.111  HCB1 DA2 24 
DA2 HCB2 HCB2 H 0 0 N N N N N N 8.792  15.598 32.092 -1.865 -1.249 -0.568 HCB2 DA2 25 
DA2 HCG1 HCG1 H 0 0 N N N N N N 10.200 14.140 33.341 -0.468 0.687  -1.239 HCG1 DA2 26 
DA2 HCG2 HCG2 H 0 0 N N N N N N 8.858  13.668 34.439 -0.480 1.278  0.440  HCG2 DA2 27 
DA2 HCD1 HCD1 H 0 0 N N N N N N 9.173  13.009 31.480 0.616  -0.818 1.184  HCD1 DA2 28 
DA2 HCD2 HCD2 H 0 0 N N N N N N 9.207  11.873 32.871 0.627  -1.409 -0.495 HCD2 DA2 29 
DA2 HNE  HNE  H 0 1 N N N N N N 6.758  13.075 33.070 1.898  1.113  -0.430 HNE  DA2 30 
DA2 HNH2 HNH2 H 0 0 N N N N N N 4.898  11.401 30.782 4.002  -2.092 0.711  HNH2 DA2 31 
DA2 HXT  HXT  H 0 1 N Y N Y N Y 7.549  18.961 32.536 -5.522 -1.520 -0.989 HXT  DA2 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA2 C1  NH1  SING N N 1  
DA2 C1  HC11 SING N N 2  
DA2 C1  HC12 SING N N 3  
DA2 C1  HC13 SING N N 4  
DA2 C2  NH1  SING N N 5  
DA2 C2  HC21 SING N N 6  
DA2 C2  HC22 SING N N 7  
DA2 C2  HC23 SING N N 8  
DA2 N   CA   SING N N 9  
DA2 N   H    SING N N 10 
DA2 N   H2   SING N N 11 
DA2 CA  CB   SING N N 12 
DA2 CA  C    SING N N 13 
DA2 CA  HA   SING N N 14 
DA2 CB  CG   SING N N 15 
DA2 CB  HCB1 SING N N 16 
DA2 CB  HCB2 SING N N 17 
DA2 CG  CD   SING N N 18 
DA2 CG  HCG1 SING N N 19 
DA2 CG  HCG2 SING N N 20 
DA2 CD  NE   SING N N 21 
DA2 CD  HCD1 SING N N 22 
DA2 CD  HCD2 SING N N 23 
DA2 NE  CZ   SING N N 24 
DA2 NE  HNE  SING N N 25 
DA2 CZ  NH2  DOUB N N 26 
DA2 CZ  NH1  SING N N 27 
DA2 NH2 HNH2 SING N N 28 
DA2 C   O    DOUB N N 29 
DA2 C   OXT  SING N N 30 
DA2 OXT HXT  SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DA2 SMILES           ACDLabs              12.01 "CN(C)C(/NCCCC(N)C(=O)O)=N"                                                                            
DA2 InChI            InChI                1.03  "InChI=1S/C8H18N4O2/c1-12(2)8(10)11-5-3-4-6(9)7(13)14/h6H,3-5,9H2,1-2H3,(H2,10,11)(H,13,14)/t6-/m0/s1" 
DA2 InChIKey         InChI                1.03  YDGMGEXADBMOMJ-LURJTMIESA-N                                                                            
DA2 SMILES_CANONICAL CACTVS               3.385 "CN(C)C(=N)NCCC[C@H](N)C(O)=O"                                                                         
DA2 SMILES           CACTVS               3.385 "CN(C)C(=N)NCCC[CH](N)C(O)=O"                                                                          
DA2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(/NCCC[C@@H](C(=O)O)N)\N(C)C"                                                                  
DA2 SMILES           "OpenEye OEToolkits" 1.7.6 "CN(C)C(=N)NCCCC(C(=O)O)N"                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DA2 "SYSTEMATIC NAME" ACDLabs              12.01 "N~5~-(N,N-dimethylcarbamimidoyl)-L-ornithine"                     
DA2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-5-[(N,N-dimethylcarbamimidoyl)amino]pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DA2 "Create component"       1999-07-27 RCSB 
DA2 "Modify descriptor"      2011-06-04 RCSB 
DA2 "Modify parent residue"  2013-10-29 PDBJ 
DA2 "Modify one letter code" 2018-03-14 RCSB 
DA2 "Modify synonyms"        2020-06-05 PDBE 
DA2 "Modify backbone"        2023-11-03 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      DA2 
_pdbx_chem_comp_synonyms.name         ADMA 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
