data_XL5
#

_chem_comp.id                                   XL5
_chem_comp.name                                 "N-[2-({5-[(2,6-dichloro-3,5-dimethoxyphenyl)methoxy]pyrimidin-2-yl}amino)-3-fluorophenyl]propanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H21 Cl2 F N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-11-05
_chem_comp.pdbx_modified_date                   2019-07-05
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       495.331
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XL5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6BIU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XL5  C1   C1   C   0  1  Y  N  N  20.913   -2.770   -8.630   5.954  -0.756   0.212  C1   XL5   1  
XL5  C2   C2   C   0  1  Y  N  N  19.715   -3.462   -8.615   4.589  -0.984   0.105  C2   XL5   2  
XL5  C3   C3   C   0  1  Y  N  N  19.519   -4.571   -7.782   3.745   0.037  -0.290  C3   XL5   3  
XL5  C4   C4   C   0  1  Y  N  N  20.567   -4.975   -6.968   4.258   1.288  -0.580  C4   XL5   4  
XL5  C5   C5   C   0  1  Y  N  N  21.777   -4.285   -6.980   5.623   1.520  -0.474  C5   XL5   5  
XL5  C6   C6   C   0  1  Y  N  N  21.947   -3.190   -7.810   6.471   0.498  -0.078  C6   XL5   6  
XL5  O1   O1   O   0  1  N  N  N  20.947   -1.703   -9.477   6.783  -1.759   0.605  O1   XL5   7  
XL5  O2   O2   O   0  1  N  N  N  22.788   -4.693   -6.172   6.127   2.750  -0.759  O2   XL5   8  
XL5  C7   C7   C   0  1  N  N  N  22.098   -0.869   -9.523   8.176  -1.452   0.693  C7   XL5   9  
XL5  C8   C8   C   0  1  N  N  N  24.063   -4.871   -6.769   7.540   2.918  -0.628  C8   XL5  10  
XL5  CL1  CL1  CL  0  0  N  N  N  18.452   -2.911   -9.671   3.941  -2.554   0.468  CL1  XL5  11  
XL5  CL2  CL2  CL  0  0  N  N  N  20.354   -6.350   -5.926   3.196   2.568  -1.076  CL2  XL5  12  
XL5  C9   C9   C   0  1  N  N  N  18.229   -5.336   -7.788   2.263  -0.214  -0.407  C9   XL5  13  
XL5  O3   O3   O   0  1  N  N  N  18.452   -6.532   -8.554   1.632   0.071   0.844  O3   XL5  14  
XL5  C10  C10  C   0  1  Y  N  N  17.621   -7.604   -8.353   0.285  -0.105   0.910  C10  XL5  15  
XL5  C11  C11  C   0  1  Y  N  N  16.325   -7.505   -7.865  -0.408   0.149   2.088  C11  XL5  16  
XL5  N1   N1   N   0  1  Y  N  N  15.559   -8.585   -7.725  -1.718  -0.033   2.116  N1   XL5  17  
XL5  C12  C12  C   0  1  Y  N  N  16.100   -9.766   -8.081  -2.368  -0.452   1.041  C12  XL5  18  
XL5  N2   N2   N   0  1  Y  N  N  17.347   -9.945   -8.556  -1.740  -0.703  -0.098  N2   XL5  19  
XL5  C13  C13  C   0  1  Y  N  N  18.103   -8.850   -8.688  -0.431  -0.537  -0.200  C13  XL5  20  
XL5  N3   N3   N   0  1  N  N  N  15.340  -10.878   -7.918  -3.741  -0.632   1.109  N3   XL5  21  
XL5  C14  C14  C   0  1  Y  N  N  14.025  -10.971   -7.427  -4.463  -0.958  -0.047  C14  XL5  22  
XL5  C15  C15  C   0  1  Y  N  N  13.037  -11.541   -8.236  -5.503  -0.135  -0.478  C15  XL5  23  
XL5  C16  C16  C   0  1  Y  N  N  11.717  -11.622   -7.715  -6.213  -0.463  -1.624  C16  XL5  24  
XL5  C17  C17  C   0  1  Y  N  N  11.430  -11.122   -6.454  -5.890  -1.603  -2.335  C17  XL5  25  
XL5  C18  C18  C   0  1  Y  N  N  12.416  -10.561   -5.669  -4.860  -2.421  -1.909  C18  XL5  26  
XL5  C19  C19  C   0  1  Y  N  N  13.696  -10.492   -6.167  -4.142  -2.099  -0.771  C19  XL5  27  
XL5  N4   N4   N   0  1  N  N  N  13.443  -12.070   -9.484  -5.829   1.021   0.244  N4   XL5  28  
XL5  C20  C20  C   0  1  N  N  N  12.796  -12.016  -10.660  -7.111   1.431   0.315  C20  XL5  29  
XL5  C21  C21  C   0  1  N  N  N  13.547  -12.665  -11.802  -7.478   2.609   1.180  C21  XL5  30  
XL5  C22  C22  C   0  1  N  N  N  14.870  -11.994  -12.108  -8.983   2.864   1.083  C22  XL5  31  
XL5  O4   O4   O   0  1  N  N  N  11.712  -11.491  -10.796  -7.969   0.852  -0.317  O4   XL5  32  
XL5  F1   F1   F   0  1  N  N  N  14.668   -9.937   -5.410  -3.132  -2.897  -0.360  F1   XL5  33  
XL5  H1   H1   H   0  1  N  N  N  22.889   -2.662   -7.818   7.532   0.677   0.004  H1   XL5  34  
XL5  H2   H2   H   0  1  N  N  N  21.941   -0.067  -10.259   8.723  -2.338   1.017  H2   XL5  35  
XL5  H3   H3   H   0  1  N  N  N  22.270   -0.427   -8.531   8.541  -1.137  -0.285  H3   XL5  36  
XL5  H4   H4   H   0  1  N  N  N  22.973   -1.468   -9.814   8.326  -0.648   1.413  H4   XL5  37  
XL5  H5   H5   H   0  1  N  N  N  24.783   -5.201   -6.006   7.810   3.942  -0.885  H5   XL5  38  
XL5  H6   H6   H   0  1  N  N  N  23.994   -5.632   -7.561   7.838   2.710   0.400  H6   XL5  39  
XL5  H7   H7   H   0  1  N  N  N  24.400   -3.919   -7.204   8.052   2.229  -1.301  H7   XL5  40  
XL5  H8   H8   H   0  1  N  N  N  17.435   -4.733   -8.252   1.845   0.431  -1.180  H8   XL5  41  
XL5  H9   H9   H   0  1  N  N  N  17.939   -5.595   -6.759   2.091  -1.257  -0.671  H9   XL5  42  
XL5  H10  H10  H   0  1  N  N  N  15.932   -6.536   -7.595   0.116   0.490   2.969  H10  XL5  43  
XL5  H11  H11  H   0  1  N  N  N  19.111   -8.944   -9.064   0.075  -0.744  -1.131  H11  XL5  44  
XL5  H12  H12  H   0  1  N  N  N  15.770  -11.742   -8.180  -4.202  -0.532   1.956  H12  XL5  45  
XL5  H13  H13  H   0  1  N  N  N  10.934  -12.075   -8.304  -7.019   0.173  -1.959  H13  XL5  46  
XL5  H14  H14  H   0  1  N  N  N  10.418  -11.173   -6.080  -6.445  -1.857  -3.226  H14  XL5  47  
XL5  H15  H15  H   0  1  N  N  N  12.187  -10.184   -4.683  -4.612  -3.311  -2.469  H15  XL5  48  
XL5  H16  H16  H   0  1  N  N  N  14.323  -12.544   -9.491  -5.133   1.525   0.692  H16  XL5  49  
XL5  H17  H17  H   0  1  N  N  N  12.917  -12.622  -12.703  -7.211   2.397   2.216  H17  XL5  50  
XL5  H18  H18  H   0  1  N  N  N  13.741  -13.716  -11.540  -6.937   3.492   0.840  H18  XL5  51  
XL5  H19  H19  H   0  1  N  N  N  15.361  -12.514  -12.944  -9.248   3.716   1.709  H19  XL5  52  
XL5  H20  H20  H   0  1  N  N  N  14.693  -10.944  -12.382  -9.250   3.076   0.048  H20  XL5  53  
XL5  H21  H21  H   0  1  N  N  N  15.517  -12.037  -11.219  -9.524   1.981   1.424  H21  XL5  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XL5  C22  C21  SING  N  N   1  
XL5  C21  C20  SING  N  N   2  
XL5  O4   C20  DOUB  N  N   3  
XL5  C20  N4   SING  N  N   4  
XL5  CL1  C2   SING  N  N   5  
XL5  C7   O1   SING  N  N   6  
XL5  N4   C15  SING  N  N   7  
XL5  O1   C1   SING  N  N   8  
XL5  C13  N2   DOUB  Y  N   9  
XL5  C13  C10  SING  Y  N  10  
XL5  C1   C2   DOUB  Y  N  11  
XL5  C1   C6   SING  Y  N  12  
XL5  C2   C3   SING  Y  N  13  
XL5  N2   C12  SING  Y  N  14  
XL5  O3   C10  SING  N  N  15  
XL5  O3   C9   SING  N  N  16  
XL5  C10  C11  DOUB  Y  N  17  
XL5  C15  C16  DOUB  Y  N  18  
XL5  C15  C14  SING  Y  N  19  
XL5  C12  N3   SING  N  N  20  
XL5  C12  N1   DOUB  Y  N  21  
XL5  N3   C14  SING  N  N  22  
XL5  C11  N1   SING  Y  N  23  
XL5  C6   C5   DOUB  Y  N  24  
XL5  C9   C3   SING  N  N  25  
XL5  C3   C4   DOUB  Y  N  26  
XL5  C16  C17  SING  Y  N  27  
XL5  C14  C19  DOUB  Y  N  28  
XL5  C5   C4   SING  Y  N  29  
XL5  C5   O2   SING  N  N  30  
XL5  C4   CL2  SING  N  N  31  
XL5  C8   O2   SING  N  N  32  
XL5  C17  C18  DOUB  Y  N  33  
XL5  C19  C18  SING  Y  N  34  
XL5  C19  F1   SING  N  N  35  
XL5  C6   H1   SING  N  N  36  
XL5  C7   H2   SING  N  N  37  
XL5  C7   H3   SING  N  N  38  
XL5  C7   H4   SING  N  N  39  
XL5  C8   H5   SING  N  N  40  
XL5  C8   H6   SING  N  N  41  
XL5  C8   H7   SING  N  N  42  
XL5  C9   H8   SING  N  N  43  
XL5  C9   H9   SING  N  N  44  
XL5  C11  H10  SING  N  N  45  
XL5  C13  H11  SING  N  N  46  
XL5  N3   H12  SING  N  N  47  
XL5  C16  H13  SING  N  N  48  
XL5  C17  H14  SING  N  N  49  
XL5  C18  H15  SING  N  N  50  
XL5  N4   H16  SING  N  N  51  
XL5  C21  H17  SING  N  N  52  
XL5  C21  H18  SING  N  N  53  
XL5  C22  H19  SING  N  N  54  
XL5  C22  H20  SING  N  N  55  
XL5  C22  H21  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XL5  SMILES            ACDLabs               12.01  "c1(c(c(c(Cl)c(OC)c1)COc3cnc(Nc2c(cccc2NC(CC)=O)F)nc3)Cl)OC"  
XL5  InChI             InChI                 1.03   "InChI=1S/C22H21Cl2FN4O4/c1-4-18(30)28-15-7-5-6-14(25)21(15)29-22-26-9-12(10-27-22)33-11-13-19(23)16(31-2)8-17(32-3)20(13)24/h5-10H,4,11H2,1-3H3,(H,28,30)(H,26,27,29)"  
XL5  InChIKey          InChI                 1.03   QQZLOGCMIZJHHI-UHFFFAOYSA-N  
XL5  SMILES_CANONICAL  CACTVS                3.385  "CCC(=O)Nc1cccc(F)c1Nc2ncc(OCc3c(Cl)c(OC)cc(OC)c3Cl)cn2"  
XL5  SMILES            CACTVS                3.385  "CCC(=O)Nc1cccc(F)c1Nc2ncc(OCc3c(Cl)c(OC)cc(OC)c3Cl)cn2"  
XL5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCC(=O)Nc1cccc(c1Nc2ncc(cn2)OCc3c(c(cc(c3Cl)OC)OC)Cl)F"  
XL5  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC(=O)Nc1cccc(c1Nc2ncc(cn2)OCc3c(c(cc(c3Cl)OC)OC)Cl)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XL5  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[2-({5-[(2,6-dichloro-3,5-dimethoxyphenyl)methoxy]pyrimidin-2-yl}amino)-3-fluorophenyl]propanamide"  
XL5  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-[2-[[5-[[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]methoxy]pyrimidin-2-yl]amino]-3-fluoranyl-phenyl]propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XL5  "Create component"  2017-11-05  RCSB  
XL5  "Initial release"   2019-07-10  RCSB  
##
