data_EC6
# 
_chem_comp.id                                    EC6 
_chem_comp.name                                  "N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H54 N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Double bound form of enone carmaphycin analogue 6; (S)-N1-((S,Z)-2,6-dimethyl-5-oxooct-6-en-4-yl)-2-((S)-2-hexanamido-3-methylbutanamido)-N5,N5-dimethylpentanediamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-09-06 
_chem_comp.pdbx_modified_date                    2020-05-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        526.752 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     EC6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4LTC 
_chem_comp.pdbx_subcomponent_list                "6NA VAL QMM 27W" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
EC6 C27 C27 C 0 1 N N N 12.438 -136.087 22.500 -5.882  0.460  0.318  CA   6NA 1  
EC6 C1  C1  C 0 1 N N N 11.795 -137.068 21.533 -4.607  0.896  -0.357 C    6NA 2  
EC6 O1  O1  O 0 1 N N N 12.489 -137.994 21.167 -4.611  1.178  -1.536 O    6NA 3  
EC6 C28 C28 C 0 1 N N N 12.452 -136.617 23.964 -7.024  0.459  -0.701 CB   6NA 4  
EC6 C29 C29 C 0 1 N N N 13.688 -136.139 24.774 -8.318  0.016  -0.017 CG   6NA 5  
EC6 C30 C30 C 0 1 N N N 13.733 -136.823 26.174 -9.460  0.016  -1.036 CD   6NA 6  
EC6 C31 C31 C 0 1 N N N 13.388 -135.848 27.332 -10.754 -0.427 -0.352 C6   6NA 7  
EC6 N1  N1  N 0 1 N N N 10.881 -136.494 20.714 -3.463  0.972  0.351  N    VAL 8  
EC6 C2  C2  C 0 1 N N S 10.163 -137.361 19.757 -2.223  1.396  -0.304 CA   VAL 9  
EC6 C5  C5  C 0 1 N N N 10.772 -137.174 18.370 -1.041  0.838  0.447  C    VAL 10 
EC6 O3  O3  O 0 1 N N N 11.502 -136.182 18.300 -1.174  0.463  1.593  O    VAL 11 
EC6 C3  C3  C 0 1 N N N 8.612  -137.089 19.838 -2.147  2.924  -0.313 CB   VAL 12 
EC6 C26 C26 C 0 1 N N N 8.059  -135.987 18.879 -3.263  3.485  -1.197 CG1  VAL 13 
EC6 C4  C4  C 0 1 N N N 7.777  -138.386 19.647 -2.314  3.451  1.114  CG2  VAL 14 
EC6 C10 C10 C 0 1 N N N 11.183 -138.227 15.142 2.582   0.662  -0.002 C    QMM 15 
EC6 C9  C9  C 0 1 N N N 15.088 -138.048 17.403 -0.080  -3.454 0.741  CD   QMM 16 
EC6 C8  C8  C 0 1 N N N 14.037 -139.097 17.699 -0.027  -1.965 0.966  CG   QMM 17 
EC6 N2  N2  N 0 1 N N N 10.978 -138.246 17.565 0.162   0.756  -0.154 N    QMM 18 
EC6 O7  O7  O 0 1 N N N 15.623 -138.194 16.318 0.802   -4.005 0.116  OE1  QMM 19 
EC6 N5  N5  N 0 1 N N N 15.800 -137.499 18.414 -1.107  -4.174 1.233  NE2  QMM 20 
EC6 C24 C24 C 0 1 N N N 15.106 -137.168 19.658 -1.158  -5.622 1.014  CH1  QMM 21 
EC6 C25 C25 C 0 1 N N N 16.932 -136.650 18.023 -2.172  -3.510 1.988  CH2  QMM 22 
EC6 C6  C6  C 0 1 N N S 11.936 -138.173 16.455 1.285   0.118  0.538  CA   QMM 23 
EC6 C7  C7  C 0 1 N N N 13.011 -139.304 16.545 1.231   -1.394 0.309  CB   QMM 24 
EC6 O2  O2  O 0 1 N N N 9.975  -138.120 15.209 2.570   1.500  -0.878 O    QMM 25 
EC6 N3  N3  N 0 1 N N N 11.872 -137.754 14.075 3.756   0.216  0.489  N3   27W 26 
EC6 C11 C11 C 0 1 N N S 11.144 -137.445 12.830 5.017   0.745  -0.036 C11  27W 27 
EC6 C12 C12 C 0 1 N N N 11.054 -135.868 12.774 5.715   1.568  1.049  C12  27W 28 
EC6 C13 C13 C 0 1 N N N 9.655  -135.165 12.716 4.868   2.798  1.381  C13  27W 29 
EC6 C15 C15 C 0 1 N N N 8.654  -135.650 13.812 5.502   3.554  2.551  C15  27W 30 
EC6 C14 C14 C 0 1 N N N 9.836  -133.621 12.867 4.799   3.715  0.159  C14  27W 31 
EC6 C16 C16 C 0 1 N N S 11.844 -138.120 11.573 5.921   -0.415 -0.456 C16  27W 32 
EC6 O6  O6  O 0 1 N N N 13.244 -137.757 11.621 6.251   -1.202 0.690  O6   27W 33 
EC6 C17 C17 C 0 1 N N R 11.747 -139.707 11.337 5.189   -1.286 -1.480 C17  27W 34 
EC6 C23 C23 C 0 1 N N N 10.558 -140.368 12.119 6.056   -2.497 -1.831 C23  27W 35 
EC6 C18 C18 C 0 1 N N N 13.011 -140.557 11.744 4.918   -0.469 -2.744 C18  27W 36 
EC6 C44 C44 C 0 1 N N N 13.464 -140.651 13.224 4.079   -1.299 -3.718 C44  27W 37 
EC6 H10 H10 H 0 1 N N N 13.475 -135.905 22.181 -5.755  -0.545 0.721  HAC1 6NA 38 
EC6 H11 H11 H 0 1 N N N 11.874 -135.143 22.472 -6.119  1.149  1.128  HAC2 6NA 39 
EC6 H12 H12 H 0 1 N N N 11.543 -136.264 24.473 -7.151  1.464  -1.105 HBC1 6NA 40 
EC6 H13 H13 H 0 1 N N N 12.455 -137.717 23.938 -6.787  -0.231 -1.512 HBC2 6NA 41 
EC6 H14 H14 H 0 1 N N N 14.603 -136.394 24.219 -8.191  -0.988 0.387  HGC1 6NA 42 
EC6 H15 H15 H 0 1 N N N 13.632 -135.049 24.907 -8.555  0.706  0.793  HGC2 6NA 43 
EC6 H16 H16 H 0 1 N N N 13.009 -137.651 26.184 -9.587  1.020  -1.440 HDC1 6NA 44 
EC6 H17 H17 H 0 1 N N N 14.746 -137.220 26.339 -9.223  -0.674 -1.846 HDC2 6NA 45 
EC6 H18 H18 H 0 1 N N N 13.436 -136.385 28.291 -11.567 -0.428 -1.078 H6C1 6NA 46 
EC6 H19 H19 H 0 1 N N N 14.110 -135.018 27.340 -10.627 -1.432 0.052  H6C2 6NA 47 
EC6 H20 H20 H 0 1 N N N 12.373 -135.449 27.185 -10.991 0.263  0.459  H6C3 6NA 48 
EC6 H9  H9  H 0 1 N N N 10.698 -135.512 20.756 -3.460  0.746  1.294  H    VAL 49 
EC6 H1  H1  H 0 1 N N N 10.323 -138.408 20.053 -2.209  1.025  -1.329 HA   VAL 50 
EC6 H2  H2  H 0 1 N N N 8.414  -136.738 20.862 -1.180  3.237  -0.705 HB   VAL 51 
EC6 H3  H3  H 0 1 N N N 8.643  -135.063 19.006 -4.229  3.273  -0.741 HG11 VAL 52 
EC6 H4  H4  H 0 1 N N N 8.141  -136.333 17.838 -3.137  4.562  -1.300 HG12 VAL 53 
EC6 H5  H5  H 0 1 N N N 7.004  -135.789 19.118 -3.215  3.018  -2.181 HG13 VAL 54 
EC6 H6  H6  H 0 1 N N N 8.158  -139.170 20.318 -1.519  3.051  1.744  HG21 VAL 55 
EC6 H7  H7  H 0 1 N N N 6.722  -138.181 19.884 -2.260  4.539  1.108  HG22 VAL 56 
EC6 H8  H8  H 0 1 N N N 7.859  -138.725 18.604 -3.281  3.137  1.506  HG23 VAL 57 
EC6 H25 H25 H 0 1 N N N 13.487 -138.791 18.601 -0.910  -1.500 0.527  HG1  QMM 58 
EC6 H26 H26 H 0 1 N N N 14.546 -140.054 17.886 -0.003  -1.760 2.036  HG2  QMM 59 
EC6 H21 H21 H 0 1 N N N 10.473 -139.093 17.729 0.285   1.120  -1.045 H    QMM 60 
EC6 H30 H30 H 0 1 N N N 15.820 -136.734 20.373 -0.276  -6.088 1.453  HH1  QMM 61 
EC6 H31 H31 H 0 1 N N N 14.308 -136.441 19.450 -2.055  -6.029 1.482  HH1A QMM 62 
EC6 H32 H32 H 0 1 N N N 14.668 -138.081 20.087 -1.183  -5.827 -0.056 HH1B QMM 63 
EC6 H27 H27 H 0 1 N N N 17.430 -136.264 18.925 -2.960  -3.194 1.304  HH2  QMM 64 
EC6 H28 H28 H 0 1 N N N 17.648 -137.242 17.434 -2.584  -4.202 2.722  HH2A QMM 65 
EC6 H29 H29 H 0 1 N N N 16.566 -135.808 17.417 -1.765  -2.638 2.500  HH2B QMM 66 
EC6 H22 H22 H 0 1 N N N 12.464 -137.209 16.507 1.219   0.326  1.605  HA   QMM 67 
EC6 H23 H23 H 0 1 N N N 12.495 -140.262 16.706 2.113   -1.860 0.748  HB2  QMM 68 
EC6 H24 H24 H 0 1 N N N 13.561 -139.338 15.593 1.207   -1.599 -0.762 HB3  QMM 69 
EC6 H33 H33 H 0 1 N N N 12.861 -137.616 14.131 3.765   -0.454 1.190  H33  27W 70 
EC6 H34 H34 H 0 1 N N N 10.120 -137.841 12.899 4.814   1.379  -0.899 H34  27W 71 
EC6 H35 H35 H 0 1 N N N 11.607 -135.550 11.878 5.838   0.959  1.944  H35  27W 72 
EC6 H36 H36 H 0 1 N N N 11.563 -135.489 13.672 6.694   1.888  0.689  H36  27W 73 
EC6 H37 H37 H 0 1 N N N 9.210  -135.365 11.730 3.861   2.482  1.656  H37  27W 74 
EC6 H38 H38 H 0 1 N N N 7.701  -135.111 13.703 6.508   3.869  2.276  H38  27W 75 
EC6 H39 H39 H 0 1 N N N 8.480  -136.730 13.697 4.898   4.430  2.787  H39  27W 76 
EC6 H40 H40 H 0 1 N N N 9.076  -135.451 14.808 5.551   2.900  3.422  H40  27W 77 
EC6 H41 H41 H 0 1 N N N 8.852  -133.130 12.826 5.805   4.031  -0.116 H41  27W 78 
EC6 H42 H42 H 0 1 N N N 10.315 -133.401 13.832 4.347   3.177  -0.675 H42  27W 79 
EC6 H43 H43 H 0 1 N N N 10.468 -133.244 12.049 4.195   4.591  0.395  H43  27W 80 
EC6 H44 H44 H 0 1 N N N 11.401 -137.650 10.682 6.834   -0.021 -0.902 H44  27W 81 
EC6 H45 H45 H 0 1 N N N 13.324 -136.821 11.760 5.484   -1.585 1.138  H45  27W 82 
EC6 H46 H46 H 0 1 N N N 11.571 -139.867 10.263 4.244   -1.626 -1.057 H46  27W 83 
EC6 H47 H47 H 0 1 N N N 10.543 -141.450 11.919 6.208   -3.106 -0.939 H47  27W 84 
EC6 H48 H48 H 0 1 N N N 10.688 -140.197 13.198 5.556   -3.092 -2.596 H48  27W 85 
EC6 H49 H49 H 0 1 N N N 9.609  -139.921 11.789 7.021   -2.157 -2.207 H49  27W 86 
EC6 H50 H50 H 0 1 N N N 12.817 -141.587 11.410 4.377   0.440  -2.481 H50  27W 87 
EC6 H51 H51 H 0 1 N N N 13.861 -140.143 11.182 5.865   -0.204 -3.215 H51  27W 88 
EC6 H52 H52 H 0 1 N N N 14.359 -141.287 13.294 3.886   -0.717 -4.619 H52  27W 89 
EC6 H53 H53 H 0 1 N N N 13.699 -139.644 13.600 4.620   -2.207 -3.981 H53  27W 90 
EC6 H54 H54 H 0 1 N N N 12.655 -141.088 13.828 3.132   -1.564 -3.246 H54  27W 91 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
EC6 C17 C16 SING N N 1  
EC6 C17 C18 SING N N 2  
EC6 C17 C23 SING N N 3  
EC6 C16 O6  SING N N 4  
EC6 C16 C11 SING N N 5  
EC6 C18 C44 SING N N 6  
EC6 C13 C12 SING N N 7  
EC6 C13 C14 SING N N 8  
EC6 C13 C15 SING N N 9  
EC6 C12 C11 SING N N 10 
EC6 C11 N3  SING N N 11 
EC6 N3  C10 SING N N 12 
EC6 C10 O2  DOUB N N 13 
EC6 C10 C6  SING N N 14 
EC6 O7  C9  DOUB N N 15 
EC6 C6  C7  SING N N 16 
EC6 C6  N2  SING N N 17 
EC6 C7  C8  SING N N 18 
EC6 C9  C8  SING N N 19 
EC6 C9  N5  SING N N 20 
EC6 N2  C5  SING N N 21 
EC6 C25 N5  SING N N 22 
EC6 O3  C5  DOUB N N 23 
EC6 C5  C2  SING N N 24 
EC6 N5  C24 SING N N 25 
EC6 C26 C3  SING N N 26 
EC6 C4  C3  SING N N 27 
EC6 C2  C3  SING N N 28 
EC6 C2  N1  SING N N 29 
EC6 N1  C1  SING N N 30 
EC6 O1  C1  DOUB N N 31 
EC6 C1  C27 SING N N 32 
EC6 C27 C28 SING N N 33 
EC6 C28 C29 SING N N 34 
EC6 C29 C30 SING N N 35 
EC6 C30 C31 SING N N 36 
EC6 C2  H1  SING N N 37 
EC6 C3  H2  SING N N 38 
EC6 C26 H3  SING N N 39 
EC6 C26 H4  SING N N 40 
EC6 C26 H5  SING N N 41 
EC6 C4  H6  SING N N 42 
EC6 C4  H7  SING N N 43 
EC6 C4  H8  SING N N 44 
EC6 N1  H9  SING N N 45 
EC6 C27 H10 SING N N 46 
EC6 C27 H11 SING N N 47 
EC6 C28 H12 SING N N 48 
EC6 C28 H13 SING N N 49 
EC6 C29 H14 SING N N 50 
EC6 C29 H15 SING N N 51 
EC6 C30 H16 SING N N 52 
EC6 C30 H17 SING N N 53 
EC6 C31 H18 SING N N 54 
EC6 C31 H19 SING N N 55 
EC6 C31 H20 SING N N 56 
EC6 N2  H21 SING N N 57 
EC6 C6  H22 SING N N 58 
EC6 C7  H23 SING N N 59 
EC6 C7  H24 SING N N 60 
EC6 C8  H25 SING N N 61 
EC6 C8  H26 SING N N 62 
EC6 C25 H27 SING N N 63 
EC6 C25 H28 SING N N 64 
EC6 C25 H29 SING N N 65 
EC6 C24 H30 SING N N 66 
EC6 C24 H31 SING N N 67 
EC6 C24 H32 SING N N 68 
EC6 N3  H33 SING N N 69 
EC6 C11 H34 SING N N 70 
EC6 C12 H35 SING N N 71 
EC6 C12 H36 SING N N 72 
EC6 C13 H37 SING N N 73 
EC6 C15 H38 SING N N 74 
EC6 C15 H39 SING N N 75 
EC6 C15 H40 SING N N 76 
EC6 C14 H41 SING N N 77 
EC6 C14 H42 SING N N 78 
EC6 C14 H43 SING N N 79 
EC6 C16 H44 SING N N 80 
EC6 O6  H45 SING N N 81 
EC6 C17 H46 SING N N 82 
EC6 C23 H47 SING N N 83 
EC6 C23 H48 SING N N 84 
EC6 C23 H49 SING N N 85 
EC6 C18 H50 SING N N 86 
EC6 C18 H51 SING N N 87 
EC6 C44 H52 SING N N 88 
EC6 C44 H53 SING N N 89 
EC6 C44 H54 SING N N 90 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
EC6 SMILES           ACDLabs              12.01 "O=C(NC(C(O)C(CC)C)CC(C)C)C(NC(=O)C(NC(=O)CCCCC)C(C)C)CCC(=O)N(C)C"                                                                                                                                                
EC6 InChI            InChI                1.03  "InChI=1S/C28H54N4O5/c1-10-12-13-14-23(33)31-25(19(5)6)28(37)29-21(15-16-24(34)32(8)9)27(36)30-22(17-18(3)4)26(35)20(7)11-2/h18-22,25-26,35H,10-17H2,1-9H3,(H,29,37)(H,30,36)(H,31,33)/t20-,21+,22+,25+,26+/m1/s1" 
EC6 InChIKey         InChI                1.03  BFKSFYOCNVYLSG-DGTHGUPJSA-N                                                                                                                                                                                        
EC6 SMILES_CANONICAL CACTVS               3.385 "CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(=O)N(C)C)C(=O)N[C@@H](CC(C)C)[C@@H](O)[C@H](C)CC"                                                                                                                        
EC6 SMILES           CACTVS               3.385 "CCCCCC(=O)N[CH](C(C)C)C(=O)N[CH](CCC(=O)N(C)C)C(=O)N[CH](CC(C)C)[CH](O)[CH](C)CC"                                                                                                                                 
EC6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(=O)N(C)C)C(=O)N[C@@H](CC(C)C)[C@H]([C@H](C)CC)O"                                                                                                                         
EC6 SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCCC(=O)NC(C(C)C)C(=O)NC(CCC(=O)N(C)C)C(=O)NC(CC(C)C)C(C(C)CC)O"                                                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
EC6 "SYSTEMATIC NAME" ACDLabs              12.01 "N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide"                                   
EC6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-N-[(4S,5S,6R)-2,6-dimethyl-5-oxidanyl-octan-4-yl]-2-[[(2S)-2-(hexanoylamino)-3-methyl-butanoyl]amino]-N',N'-dimethyl-pentanediamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
EC6 "Create component" 2013-09-06 RCSB 
EC6 "Initial release"  2014-07-02 RCSB 
EC6 "Modify synonyms"  2020-05-27 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 EC6 "Double bound form of enone carmaphycin analogue 6"                                                                   ? ? 
2 EC6 "(S)-N1-((S,Z)-2,6-dimethyl-5-oxooct-6-en-4-yl)-2-((S)-2-hexanamido-3-methylbutanamido)-N5,N5-dimethylpentanediamide" ? ? 
# 
