data_NO6
# 
_chem_comp.id                                    NO6 
_chem_comp.name                                  "S-[(pyridin-2-yl)methyl]-L-cysteine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H12 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-06 
_chem_comp.pdbx_modified_date                    2023-08-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        212.269 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NO6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ULV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NO6 C11 C1  C 0 1 N N R 6.086 -21.752 -0.167 -2.800 0.112  -0.580 C11 NO6 1  
NO6 N2  N1  N 0 1 Y N N 4.999 -25.999 4.021  3.092  0.919  0.705  N2  NO6 2  
NO6 C3  C2  C 0 1 Y N N 4.702 -24.684 3.913  2.501  -0.235 0.463  C3  NO6 3  
NO6 C5  C3  C 0 1 Y N N 2.774 -25.001 5.305  4.459  -1.018 -0.656 C5  NO6 4  
NO6 C6  C4  C 0 1 Y N N 3.106 -26.346 5.402  5.048  0.207  -0.383 C6  NO6 5  
NO6 C8  C5  C 0 1 N N N 5.588 -23.783 3.085  1.089  -0.462 0.940  C8  NO6 6  
NO6 C10 C6  C 0 1 N N N 5.172 -21.785 1.055  -1.692 -0.283 0.398  C10 NO6 7  
NO6 C1  C7  C 0 1 Y N N 4.232 -26.824 4.743  4.326  1.163  0.307  C1  NO6 8  
NO6 C12 C8  C 0 1 N N N 7.371 -22.471 0.118  -4.143 -0.175 0.041  C12 NO6 9  
NO6 C4  C9  C 0 1 Y N N 3.582 -24.159 4.553  3.161  -1.237 -0.222 C4  NO6 10 
NO6 N15 N2  N 0 1 N N N 5.404 -22.377 -1.318 -2.698 1.546  -0.883 N15 NO6 11 
NO6 O13 O1  O 0 1 N N N 8.313 -21.820 0.616  -4.631 -1.426 0.036  O13 NO6 12 
NO6 O14 O2  O 0 1 N N N 7.452 -23.688 -0.150 -4.781 0.720  0.542  O14 NO6 13 
NO6 S9  S1  S 0 1 N N N 4.791 -23.433 1.551  -0.075 0.063  -0.348 S9  NO6 14 
NO6 H1  H1  H 0 1 N N N 6.311 -20.702 -0.407 -2.695 -0.463 -1.500 H1  NO6 15 
NO6 H2  H2  H 0 1 N N N 1.899 -24.615 5.808  4.999  -1.783 -1.194 H2  NO6 16 
NO6 H3  H3  H 0 1 N N N 2.493 -27.016 5.986  6.058  0.413  -0.705 H3  NO6 17 
NO6 H4  H4  H 0 1 N N N 6.548 -24.286 2.894  0.944  -1.521 1.151  H4  NO6 18 
NO6 H5  H5  H 0 1 N N N 5.768 -22.844 3.629  0.914  0.117  1.846  H5  NO6 19 
NO6 H6  H6  H 0 1 N N N 5.674 -21.271 1.888  -1.798 0.292  1.319  H6  NO6 20 
NO6 H7  H7  H 0 1 N N N 4.235 -21.262 0.812  -1.768 -1.347 0.624  H7  NO6 21 
NO6 H8  H8  H 0 1 N N N 4.490 -27.870 4.814  4.777  2.119  0.524  H8  NO6 22 
NO6 H9  H9  H 0 1 N N N 3.345 -23.109 4.465  2.671  -2.180 -0.417 H9  NO6 23 
NO6 H10 H10 H 0 1 N N N 4.549 -21.893 -1.502 -2.793 2.100  -0.045 H10 NO6 24 
NO6 H11 H11 H 0 1 N N N 5.995 -22.327 -2.123 -1.832 1.753  -1.358 H11 NO6 25 
NO6 H13 H13 H 0 1 N N N 9.060 -22.392 0.745  -5.497 -1.561 0.446  H13 NO6 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NO6 N15 C11 SING N N 1  
NO6 C11 C12 SING N N 2  
NO6 C11 C10 SING N N 3  
NO6 O14 C12 DOUB N N 4  
NO6 C12 O13 SING N N 5  
NO6 C10 S9  SING N N 6  
NO6 S9  C8  SING N N 7  
NO6 C8  C3  SING N N 8  
NO6 C3  N2  DOUB Y N 9  
NO6 C3  C4  SING Y N 10 
NO6 N2  C1  SING Y N 11 
NO6 C4  C5  DOUB Y N 12 
NO6 C1  C6  DOUB Y N 13 
NO6 C5  C6  SING Y N 14 
NO6 C11 H1  SING N N 15 
NO6 C5  H2  SING N N 16 
NO6 C6  H3  SING N N 17 
NO6 C8  H4  SING N N 18 
NO6 C8  H5  SING N N 19 
NO6 C10 H6  SING N N 20 
NO6 C10 H7  SING N N 21 
NO6 C1  H8  SING N N 22 
NO6 C4  H9  SING N N 23 
NO6 N15 H10 SING N N 24 
NO6 N15 H11 SING N N 25 
NO6 O13 H13 SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NO6 SMILES           ACDLabs              12.01 "O=C(O)C(N)CSCc1ccccn1"                                                                        
NO6 InChI            InChI                1.03  "InChI=1S/C9H12N2O2S/c10-8(9(12)13)6-14-5-7-3-1-2-4-11-7/h1-4,8H,5-6,10H2,(H,12,13)/t8-/m0/s1" 
NO6 InChIKey         InChI                1.03  LHCQVBLTAYDREK-QMMMGPOBSA-N                                                                    
NO6 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CSCc1ccccn1)C(O)=O"                                                                   
NO6 SMILES           CACTVS               3.385 "N[CH](CSCc1ccccn1)C(O)=O"                                                                     
NO6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)CSC[C@@H](C(=O)O)N"                                                                 
NO6 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)CSCC(C(=O)O)N"                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NO6 "SYSTEMATIC NAME" ACDLabs              12.01 "S-[(pyridin-2-yl)methyl]-L-cysteine"                           
NO6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-azanyl-3-(pyridin-2-ylmethylsulfanyl)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NO6 "Create component" 2022-04-06 RCSB 
NO6 "Initial release"  2023-08-30 RCSB 
# 
