data_LN7
# 
_chem_comp.id                                    LN7 
_chem_comp.name                                  "N~5~-[(1S)-1-aminopentyl]-L-ornithine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H23 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-10-20 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        217.309 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LN7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3P8E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LN7 C    C    C 0 1 N N N -28.611 19.324 -21.637 -4.893 -0.616 0.146  C    LN7 1  
LN7 N    N    N 0 1 N N N -26.990 19.321 -23.491 -3.982 1.425  -0.808 N    LN7 2  
LN7 CA   CA   C 0 1 N N S -27.187 18.941 -22.073 -3.724 -0.003 -0.580 CA   LN7 3  
LN7 CB   CB   C 0 1 N N N -26.186 19.695 -21.196 -2.458 -0.164 0.264  CB   LN7 4  
LN7 CD   CD   C 0 1 N N N -25.280 20.117 -18.876 0.015  0.185  0.320  CD   LN7 5  
LN7 NE   NE   N 0 1 N N N -25.448 19.749 -17.461 1.175  0.674  -0.437 NE   LN7 6  
LN7 CG   CG   C 0 1 N N N -26.297 19.321 -19.717 -1.250 0.345  -0.524 CG   LN7 7  
LN7 CZ   CZ   C 0 1 N N S -24.645 20.556 -16.519 2.411  0.535  0.344  CZ   LN7 8  
LN7 OA1  OA1  O 0 1 N N N -29.120 18.668 -20.696 -5.082 -1.945 0.114  OA1  LN7 9  
LN7 OA2  OA2  O 0 1 N N N -29.149 20.279 -22.251 -5.659 0.088  0.761  OA2  LN7 10 
LN7 CH1  CH1  C 0 1 N N N -25.028 22.026 -16.791 3.513  -0.046 -0.544 CH1  LN7 11 
LN7 NH2  NH2  N 0 1 N N N -25.013 20.092 -15.175 2.826  1.853  0.842  NH2  LN7 12 
LN7 CI1  CI1  C 0 1 N N N -26.758 22.131 -15.076 5.865  -0.887 -0.589 CI1  LN7 13 
LN7 CK1  CK1  C 0 1 N N N -25.819 22.992 -14.223 7.115  -1.148 0.255  CK1  LN7 14 
LN7 CT1  CT1  C 0 1 N N N -26.494 22.372 -16.556 4.763  -0.307 0.300  CT1  LN7 15 
LN7 HN   HN   H 0 1 N N N -26.065 19.073 -23.778 -4.113 1.912  0.066  HN   LN7 16 
LN7 HNA  HNA  H 0 1 N N N -27.656 18.839 -24.061 -3.242 1.845  -1.349 HNA  LN7 17 
LN7 HA   HA   H 0 1 N N N -27.036 17.857 -21.964 -3.587 -0.505 -1.538 HA   LN7 18 
LN7 HB   HB   H 0 1 N N N -25.170 19.451 -21.540 -2.560 0.411  1.185  HB   LN7 19 
LN7 HBA  HBA  H 0 1 N N N -26.379 20.773 -21.297 -2.315 -1.217 0.508  HBA  LN7 20 
LN7 HD   HD   H 0 1 N N N -24.258 19.876 -19.204 0.158  -0.868 0.564  HD   LN7 21 
LN7 HDA  HDA  H 0 1 N N N -25.456 21.195 -19.003 -0.087 0.760  1.240  HDA  LN7 22 
LN7 HNE  HNE  H 0 1 N N N -26.412 19.872 -17.225 1.253  0.200  -1.325 HNE  LN7 23 
LN7 HG   HG   H 0 1 N N N -27.313 19.550 -19.364 -1.148 -0.230 -1.445 HG   LN7 24 
LN7 HGA  HGA  H 0 1 N N N -26.095 18.246 -19.602 -1.393 1.398  -0.768 HGA  LN7 25 
LN7 HZ   HZ   H 0 1 N N N -23.554 20.461 -16.625 2.234  -0.133 1.188  HZ   LN7 26 
LN7 HOA1 HOA1 H 0 0 N N N -29.989 19.003 -20.509 -5.845 -2.292 0.595  HOA1 LN7 27 
LN7 HH1  HH1  H 0 1 N N N -24.426 22.656 -16.119 3.170  -0.982 -0.984 HH1  LN7 28 
LN7 HH1A HH1A H 0 0 N N N -24.802 22.238 -17.846 3.752  0.663  -1.337 HH1A LN7 29 
LN7 HNH2 HNH2 H 0 0 N N N -24.496 20.607 -14.491 2.996  2.491  0.079  HNH2 LN7 30 
LN7 HNHA HNHA H 0 0 N N N -25.992 20.234 -15.030 2.143  2.229  1.483  HNHA LN7 31 
LN7 HI1  HI1  H 0 1 N N N -27.801 22.396 -14.846 6.104  -0.178 -1.382 HI1  LN7 32 
LN7 HI1A HI1A H 0 0 N N N -26.585 21.069 -14.846 5.522  -1.823 -1.029 HI1A LN7 33 
LN7 HK1  HK1  H 0 1 N N N -26.020 22.809 -13.157 7.458  -0.212 0.695  HK1  LN7 34 
LN7 HK1A HK1A H 0 0 N N N -24.775 22.730 -14.450 6.877  -1.857 1.048  HK1A LN7 35 
LN7 HK1B HK1B H 0 0 N N N -25.989 24.055 -14.450 7.900  -1.562 -0.378 HK1B LN7 36 
LN7 HT1  HT1  H 0 1 N N N -26.689 23.423 -16.817 5.106  0.629  0.740  HT1  LN7 37 
LN7 HT1A HT1A H 0 0 N N N -27.145 21.735 -17.173 4.524  -1.016 1.093  HT1A LN7 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LN7 OA2 C    DOUB N N 1  
LN7 CA  C    SING N N 2  
LN7 C   OA1  SING N N 3  
LN7 N   CA   SING N N 4  
LN7 N   HN   SING N N 5  
LN7 N   HNA  SING N N 6  
LN7 CA  CB   SING N N 7  
LN7 CA  HA   SING N N 8  
LN7 CB  CG   SING N N 9  
LN7 CB  HB   SING N N 10 
LN7 CB  HBA  SING N N 11 
LN7 CG  CD   SING N N 12 
LN7 CD  NE   SING N N 13 
LN7 CD  HD   SING N N 14 
LN7 CD  HDA  SING N N 15 
LN7 NE  CZ   SING N N 16 
LN7 NE  HNE  SING N N 17 
LN7 CG  HG   SING N N 18 
LN7 CG  HGA  SING N N 19 
LN7 CH1 CZ   SING N N 20 
LN7 CZ  NH2  SING N N 21 
LN7 CZ  HZ   SING N N 22 
LN7 OA1 HOA1 SING N N 23 
LN7 CH1 CT1  SING N N 24 
LN7 CH1 HH1  SING N N 25 
LN7 CH1 HH1A SING N N 26 
LN7 NH2 HNH2 SING N N 27 
LN7 NH2 HNHA SING N N 28 
LN7 CT1 CI1  SING N N 29 
LN7 CI1 CK1  SING N N 30 
LN7 CI1 HI1  SING N N 31 
LN7 CI1 HI1A SING N N 32 
LN7 CK1 HK1  SING N N 33 
LN7 CK1 HK1A SING N N 34 
LN7 CK1 HK1B SING N N 35 
LN7 CT1 HT1  SING N N 36 
LN7 CT1 HT1A SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LN7 SMILES           ACDLabs              12.01 "O=C(O)C(N)CCCNC(N)CCCC"                                                                                   
LN7 SMILES_CANONICAL CACTVS               3.370 "CCCC[C@@H](N)NCCC[C@H](N)C(O)=O"                                                                          
LN7 SMILES           CACTVS               3.370 "CCCC[CH](N)NCCC[CH](N)C(O)=O"                                                                             
LN7 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCC[C@@H](N)NCCC[C@@H](C(=O)O)N"                                                                         
LN7 SMILES           "OpenEye OEToolkits" 1.7.0 "CCCCC(N)NCCCC(C(=O)O)N"                                                                                   
LN7 InChI            InChI                1.03  "InChI=1S/C10H23N3O2/c1-2-3-6-9(12)13-7-4-5-8(11)10(14)15/h8-9,13H,2-7,11-12H2,1H3,(H,14,15)/t8-,9-/m0/s1" 
LN7 InChIKey         InChI                1.03  RLYDQIKERMGUOF-IUCAKERBSA-N                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LN7 "SYSTEMATIC NAME" ACDLabs              12.01 "N~5~-[(1S)-1-aminopentyl]-L-ornithine"                      
LN7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-5-[[(1S)-1-azanylpentyl]amino]pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LN7 "Create component"  2010-10-20 RCSB 
LN7 "Modify descriptor" 2011-06-04 RCSB 
# 
