data_MK7
#

_chem_comp.id                                   MK7
_chem_comp.name                                 "(2S,5R)-1-formyl-N-(piperidin-4-yl)-5-[(sulfooxy)amino]piperidine-2-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H22 N4 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "MK-7655, bound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-11-27
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       350.391
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MK7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4NK3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MK7  C4   C4   C  0  1  N  N  N   3.610  13.774  19.452   1.464   0.912  -1.215  C4   MK7   1  
MK7  C5   C5   C  0  1  N  N  N   9.446  17.856  17.398  -6.761   1.620  -0.090  C5   MK7   2  
MK7  C6   C6   C  0  1  N  N  N  10.760  15.927  17.920  -6.547  -0.687   0.618  C6   MK7   3  
MK7  C7   C7   C  0  1  N  N  N   5.122  11.979  20.210   1.416  -1.158   0.184  C7   MK7   4  
MK7  C8   C8   C  0  1  N  N  N   5.499  10.647  18.185  -0.778  -2.243   0.164  C8   MK7   5  
MK7  C10  C10  C  0  1  N  N  S   5.612  13.029  17.986  -0.697   0.177  -0.199  C10  MK7   6  
MK7  C1   C1   C  0  1  N  N  N   4.303  13.817  18.093  -0.049   0.823  -1.428  C1   MK7   7  
MK7  C2   C2   C  0  1  N  N  N   8.267  16.968  17.036  -5.264   1.860   0.114  C2   MK7   8  
MK7  C3   C3   C  0  1  N  N  N   9.645  14.986  17.494  -5.043  -0.517   0.843  C3   MK7   9  
MK7  C9   C9   C  0  1  N  N  N   8.330  15.669  17.811  -4.506   0.549  -0.116  C9   MK7  10  
MK7  C11  C11  C  0  1  N  N  N   6.826  13.822  18.431  -2.166  -0.039  -0.457  C11  MK7  11  
MK7  C12  C12  C  0  1  N  N  R   3.683  12.432  20.165   2.040  -0.496  -1.049  C12  MK7  12  
MK7  N13  N13  N  0  1  N  N  N  10.699  17.155  17.134  -7.226   0.594   0.851  N13  MK7  13  
MK7  N14  N14  N  0  1  N  N  N   7.180  14.820  17.551  -3.078   0.758   0.135  N14  MK7  14  
MK7  N15  N15  N  0  1  N  N  N   3.016  11.353  19.443   3.497  -0.412  -0.876  N15  MK7  15  
MK7  N16  N16  N  0  1  N  N  N   5.593  11.845  18.836  -0.046  -1.116   0.054  N16  MK7  16  
MK7  O17  O17  O  0  1  N  N  N   1.749   9.465  17.916   5.483   1.120   1.826  O17  MK7  17  
MK7  O18  O18  O  0  1  N  N  N   5.516  10.515  16.961  -0.225  -3.317   0.274  O18  MK7  18  
MK7  O19  O19  O  0  1  N  N  N   7.450  13.577  19.456  -2.528  -0.929  -1.196  O19  MK7  19  
MK7  O20  O20  O  0  1  N  N  N  -0.444  10.703  18.214   5.873   1.504  -0.467  O20  MK7  20  
MK7  O21  O21  O  0  1  N  N  N   1.499  11.701  16.944   5.908  -0.750   0.222  O21  MK7  21  
MK7  O22  O22  O  0  1  N  N  N   1.585  11.566  19.422   3.840   0.377   0.307  O22  MK7  22  
MK7  S23  S23  S  0  1  N  N  N   0.985  10.895  18.040   5.336   0.508   0.551  S23  MK7  23  
MK7  H1   H1   H  0  1  N  N  N   4.078  14.531  20.099   1.924   1.393  -2.077  H1   MK7  24  
MK7  H2   H2   H  0  1  N  N  N   2.549  14.025  19.303   1.670   1.497  -0.318  H2   MK7  25  
MK7  H3   H3   H  0  1  N  N  N   9.409  18.775  16.795  -7.305   2.548   0.087  H3   MK7  26  
MK7  H4   H4   H  0  1  N  N  N   9.392  18.116  18.465  -6.940   1.284  -1.111  H4   MK7  27  
MK7  H5   H5   H  0  1  N  N  N  11.732  15.438  17.758  -6.726  -1.013  -0.406  H5   MK7  28  
MK7  H6   H6   H  0  1  N  N  N  10.645  16.170  18.987  -6.935  -1.435   1.310  H6   MK7  29  
MK7  H7   H7   H  0  1  N  N  N   5.193  11.010  20.726   1.748  -2.194   0.250  H7   MK7  30  
MK7  H8   H8   H  0  1  N  N  N   5.732  12.723  20.743   1.721  -0.618   1.081  H8   MK7  31  
MK7  H9   H9   H  0  1  N  Y  N   5.403   9.755  18.786  -1.856  -2.190   0.154  H9   MK7  32  
MK7  H10  H10  H  0  1  N  N  N   5.753  12.726  16.938  -0.569   0.827   0.666  H10  MK7  33  
MK7  H11  H11  H  0  1  N  N  N   4.523  14.869  17.860  -0.456   1.824  -1.569  H11  MK7  34  
MK7  H12  H12  H  0  1  N  N  N   3.604  13.414  17.345  -0.258   0.217  -2.310  H12  MK7  35  
MK7  H13  H13  H  0  1  N  N  N   7.331  17.491  17.280  -4.915   2.611  -0.595  H13  MK7  36  
MK7  H14  H14  H  0  1  N  N  N   8.295  16.749  15.958  -5.086   2.209   1.131  H14  MK7  37  
MK7  H15  H15  H  0  1  N  N  N   9.720  14.039  18.048  -4.862  -0.205   1.872  H15  MK7  38  
MK7  H16  H16  H  0  1  N  N  N   9.714  14.786  16.415  -4.537  -1.464   0.655  H16  MK7  39  
MK7  H17  H17  H  0  1  N  N  N   8.338  15.922  18.882  -4.652   0.220  -1.145  H17  MK7  40  
MK7  H18  H18  H  0  1  N  N  N   3.283  12.526  21.185   1.812  -1.089  -1.934  H18  MK7  41  
MK7  H19  H19  H  0  1  N  N  N  10.753  16.929  16.161  -7.107   0.897   1.806  H19  MK7  42  
MK7  H21  H21  H  0  1  N  N  N   6.639  14.962  16.722  -2.789   1.471   0.726  H21  MK7  43  
MK7  H22  H22  H  0  1  N  N  N   3.213  10.483  19.896   3.938  -0.036  -1.702  H22  MK7  44  
MK7  H20  H20  H  0  1  N  N  N  -0.912  11.168  17.531   6.825   1.662  -0.398  H20  MK7  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MK7  O21  S23  DOUB  N  N   1  
MK7  O18  C8   DOUB  N  N   2  
MK7  C2   C5   SING  N  N   3  
MK7  C2   C9   SING  N  N   4  
MK7  N13  C5   SING  N  N   5  
MK7  N13  C6   SING  N  N   6  
MK7  C3   C9   SING  N  N   7  
MK7  C3   C6   SING  N  N   8  
MK7  N14  C9   SING  N  N   9  
MK7  N14  C11  SING  N  N  10  
MK7  O17  S23  DOUB  N  N  11  
MK7  C10  C1   SING  N  N  12  
MK7  C10  C11  SING  N  N  13  
MK7  C10  N16  SING  N  N  14  
MK7  S23  O20  SING  N  N  15  
MK7  S23  O22  SING  N  N  16  
MK7  C1   C4   SING  N  N  17  
MK7  C8   N16  SING  N  N  18  
MK7  C11  O19  DOUB  N  N  19  
MK7  N16  C7   SING  N  N  20  
MK7  O22  N15  SING  N  N  21  
MK7  N15  C12  SING  N  N  22  
MK7  C4   C12  SING  N  N  23  
MK7  C12  C7   SING  N  N  24  
MK7  C4   H1   SING  N  N  25  
MK7  C4   H2   SING  N  N  26  
MK7  C5   H3   SING  N  N  27  
MK7  C5   H4   SING  N  N  28  
MK7  C6   H5   SING  N  N  29  
MK7  C6   H6   SING  N  N  30  
MK7  C7   H7   SING  N  N  31  
MK7  C7   H8   SING  N  N  32  
MK7  C8   H9   SING  N  N  33  
MK7  C10  H10  SING  N  N  34  
MK7  C1   H11  SING  N  N  35  
MK7  C1   H12  SING  N  N  36  
MK7  C2   H13  SING  N  N  37  
MK7  C2   H14  SING  N  N  38  
MK7  C3   H15  SING  N  N  39  
MK7  C3   H16  SING  N  N  40  
MK7  C9   H17  SING  N  N  41  
MK7  C12  H18  SING  N  N  42  
MK7  N13  H19  SING  N  N  43  
MK7  N14  H21  SING  N  N  44  
MK7  N15  H22  SING  N  N  45  
MK7  O20  H20  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MK7  SMILES            ACDLabs               12.01  "O=CN2C(C(=O)NC1CCNCC1)CCC(NOS(=O)(=O)O)C2"  
MK7  InChI             InChI                 1.03   "InChI=1S/C12H22N4O6S/c17-8-16-7-10(15-22-23(19,20)21)1-2-11(16)12(18)14-9-3-5-13-6-4-9/h8-11,13,15H,1-7H2,(H,14,18)(H,19,20,21)/t10-,11+/m1/s1"  
MK7  InChIKey          InChI                 1.03   VGHMECNLFQGIJM-MNOVXSKESA-N  
MK7  SMILES_CANONICAL  CACTVS                3.385  "O[S](=O)(=O)ON[C@@H]1CC[C@H](N(C1)C=O)C(=O)NC2CCNCC2"  
MK7  SMILES            CACTVS                3.385  "O[S](=O)(=O)ON[CH]1CC[CH](N(C1)C=O)C(=O)NC2CCNCC2"  
MK7  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C1C[C@H](N(C[C@@H]1NOS(=O)(=O)O)C=O)C(=O)NC2CCNCC2"  
MK7  SMILES            "OpenEye OEToolkits"  1.7.6  "C1CC(N(CC1NOS(=O)(=O)O)C=O)C(=O)NC2CCNCC2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MK7  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S,5R)-1-formyl-N-(piperidin-4-yl)-5-[(sulfooxy)amino]piperidine-2-carboxamide"  
MK7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[[(3R,6S)-1-methanoyl-6-(piperidin-4-ylcarbamoyl)piperidin-3-yl]amino] hydrogen sulfate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MK7  "Create component"  2013-11-27  RCSB  
MK7  "Initial release"   2014-02-19  RCSB  
MK7  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MK7
_pdbx_chem_comp_synonyms.name        "MK-7655, bound form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
