data_PO8
#

_chem_comp.id                                   PO8
_chem_comp.name                                 "(1~{R},2~{S},3~{S},4~{S},5~{R},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C7 H16 N O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2020-04-26
_chem_comp.pdbx_modified_date                   2021-05-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       194.206
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PO8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6YTR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PO8  C1    C1    C  0  1  N  N  S  -42.682  -39.666   -7.568   1.228   1.368  -0.229  C1    PO8   1  
PO8  C2    C2    C  0  1  N  N  S  -41.898  -40.785   -8.283   1.717   0.055   0.386  C2    PO8   2  
PO8  C3    C3    C  0  1  N  N  S  -41.771  -40.493   -9.772   0.853  -1.100  -0.125  C3    PO8   3  
PO8  C4    C4    C  0  1  N  N  R  -43.118  -40.213  -10.420  -0.605  -0.861   0.274  C4    PO8   4  
PO8  C5    C5    C  0  1  N  N  R  -43.944  -39.150   -9.700  -1.094   0.452  -0.340  C5    PO8   5  
PO8  C6    C6    C  0  1  N  N  N  -45.295  -38.880  -10.392  -2.551   0.691   0.059  C6    PO8   6  
PO8  C7    C7    C  0  1  N  N  R  -44.064  -39.449   -8.203  -0.229   1.607   0.170  C7    PO8   7  
PO8  O8    O1    O  0  1  N  N  N  -40.580  -40.997   -7.735   3.078  -0.168   0.013  O8    PO8   8  
PO8  O9    O2    O  0  1  N  N  N  -41.194  -41.618  -10.441   1.309  -2.326   0.449  O9    PO8   9  
PO8  O10   O3    O  0  1  N  N  N  -42.852  -39.750  -11.734  -1.412  -1.940  -0.202  O10   PO8  10  
PO8  O11   O4    O  0  1  N  N  N  -46.210  -39.988  -10.458  -3.375  -0.325  -0.516  O11   PO8  11  
PO8  N12   N1    N  1  1  N  N  N  -44.948  -40.618   -7.925  -0.330   1.684   1.633  N12   PO8  12  
PO8  O1    O5    O  0  1  N  Y  N  -41.967  -38.418   -7.596   1.326   1.293  -1.653  O1    PO8  13  
PO8  H11   H1    H  0  1  N  N  N  -42.833  -39.974   -6.523   1.844   2.191   0.134  H11   PO8  14  
PO8  H2    H2    H  0  1  N  N  N  -42.477  -41.714   -8.174   1.642   0.112   1.472  H2    PO8  15  
PO8  H3    H3    H  0  1  N  N  N  -41.128  -39.610   -9.903   0.927  -1.157  -1.211  H3    PO8  16  
PO8  H4    H4    H  0  1  N  N  N  -43.697  -41.148  -10.455  -0.680  -0.804   1.360  H4    PO8  17  
PO8  H5    H5    H  0  1  N  N  N  -43.372  -38.214   -9.778  -1.019   0.395  -1.426  H5    PO8  18  
PO8  H61   H6    H  0  1  N  N  N  -45.085  -38.557  -11.422  -2.640   0.660   1.145  H61   PO8  19  
PO8  H6    H7    H  0  1  N  N  N  -45.794  -38.065   -9.847  -2.872   1.667  -0.304  H6    PO8  20  
PO8  H7    H8    H  0  1  N  N  N  -44.511  -38.565   -7.725  -0.577   2.542  -0.268  H7    PO8  21  
PO8  HO8   H9    H  0  1  N  N  N  -40.649  -41.180   -6.805   3.455  -0.985   0.368  HO8   PO8  22  
PO8  HO9   H10   H  0  1  N  N  N  -40.349  -41.817  -10.056   2.227  -2.542   0.238  HO9   PO8  23  
PO8  HO10  H11   H  0  0  N  N  N  -43.672  -39.562  -12.176  -1.159  -2.805   0.147  HO10  PO8  24  
PO8  HO11  H12   H  0  0  N  N  N  -47.006  -39.716  -10.901  -4.314  -0.237  -0.305  HO11  PO8  25  
PO8  HN11  H13   H  0  0  N  N  N  -44.995  -40.774   -6.938  -0.008   0.818   2.039  HN11  PO8  26  
PO8  HN13  H14   H  0  0  N  N  N  -45.865  -40.433   -8.277   0.240   2.445   1.970  HN13  PO8  27  
PO8  H1    H16   H  0  1  N  N  N  -42.475  -37.751   -7.149   2.224   1.142  -1.978  H1    PO8  28  
PO8  HN12  HN12  H  0  0  N  N  N  -44.576  -41.431   -8.373  -1.291   1.841   1.897  HN12  PO8  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PO8  O10   C4    SING  N  N   1  
PO8  O11   C6    SING  N  N   2  
PO8  O9    C3    SING  N  N   3  
PO8  C4    C3    SING  N  N   4  
PO8  C4    C5    SING  N  N   5  
PO8  C6    C5    SING  N  N   6  
PO8  C3    C2    SING  N  N   7  
PO8  C5    C7    SING  N  N   8  
PO8  C2    O8    SING  N  N   9  
PO8  C2    C1    SING  N  N  10  
PO8  C7    N12   SING  N  N  11  
PO8  C7    C1    SING  N  N  12  
PO8  C1    O1    SING  N  N  13  
PO8  C1    H11   SING  N  N  14  
PO8  C2    H2    SING  N  N  15  
PO8  C3    H3    SING  N  N  16  
PO8  C4    H4    SING  N  N  17  
PO8  C5    H5    SING  N  N  18  
PO8  C6    H61   SING  N  N  19  
PO8  C6    H6    SING  N  N  20  
PO8  C7    H7    SING  N  N  21  
PO8  O8    HO8   SING  N  N  22  
PO8  O9    HO9   SING  N  N  23  
PO8  O10   HO10  SING  N  N  24  
PO8  O11   HO11  SING  N  N  25  
PO8  N12   HN11  SING  N  N  26  
PO8  N12   HN13  SING  N  N  27  
PO8  O1    H1    SING  N  N  28  
PO8  HN12  N12   SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PO8  InChI             InChI                 1.03   "InChI=1S/C7H15NO5/c8-3-2(1-9)4(10)6(12)7(13)5(3)11/h2-7,9-13H,1,8H2/p+1/t2-,3+,4+,5-,6-,7-/m0/s1"  
PO8  InChIKey          InChI                 1.03   SWVTZDDSAFUTKS-ARYBSUEZSA-O  
PO8  SMILES_CANONICAL  CACTVS                3.385  "[NH3+][C@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](O)[C@H]1CO"  
PO8  SMILES            CACTVS                3.385  "[NH3+][CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1CO"  
PO8  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C([C@H]1[C@H]([C@@H]([C@@H]([C@H]([C@@H]1O)O)O)O)[NH3+])O"  
PO8  SMILES            "OpenEye OEToolkits"  2.0.7  "C(C1C(C(C(C(C1O)O)O)O)[NH3+])O"  
#
_pdbx_chem_comp_identifier.comp_id          PO8
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(1~{R},2~{R},3~{R},4~{S},5~{S},6~{S})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl]azanium"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PO8  "Create component"  2020-04-26  PDBE  
PO8  "Modify atom id"    2020-04-26  PDBE  
PO8  "Initial release"   2021-05-12  RCSB  
##
