data_XL8
#

_chem_comp.id                                   XL8
_chem_comp.name                                 "N-[3,5-dichloro-2-({5-[(2,6-dichloro-3,5-dimethoxyphenyl)methoxy]pyrimidin-2-yl}amino)phenyl]propanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H20 Cl4 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-11-05
_chem_comp.pdbx_modified_date                   2019-07-05
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       546.231
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XL8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6BIS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XL8  C1   C1   C   0  1  Y  N  N  22.230   -3.741   -6.386   6.444  -0.777   0.236  C1   XL8   1  
XL8  C2   C2   C   0  1  Y  N  N  20.999   -4.394   -6.372   5.066  -0.947   0.249  C2   XL8   2  
XL8  C3   C3   C   0  1  Y  N  N  19.933   -3.977   -7.174   4.245   0.012  -0.316  C3   XL8   3  
XL8  C4   C4   C   0  1  Y  N  N  20.125   -2.848   -7.952   4.794   1.141  -0.894  C4   XL8   4  
XL8  C5   C5   C   0  1  Y  N  N  21.343   -2.161   -7.953   6.172   1.315  -0.909  C5   XL8   5  
XL8  C6   C6   C   0  1  Y  N  N  22.395   -2.620   -7.174   6.996   0.357  -0.338  C6   XL8   6  
XL8  O1   O1   O   0  1  N  N  N  23.223   -4.196   -5.569   7.251  -1.720   0.791  O1   XL8   7  
XL8  O2   O2   O   0  1  N  N  N  21.468   -1.066   -8.754   6.711   2.425  -1.477  O2   XL8   8  
XL8  C7   C7   C   0  1  N  N  N  24.548   -4.302   -6.082   8.659  -1.480   0.741  C7   XL8   9  
XL8  C8   C8   C   0  1  N  N  N  22.689   -0.333   -8.741   8.136   2.538  -1.456  C8   XL8  10  
XL8  CL1  CL1  CL  0  0  N  N  N  20.809   -5.809   -5.393   4.374  -2.364   0.974  CL1  XL8  11  
XL8  CL2  CL2  CL  0  0  N  N  N  18.852   -2.364   -9.027   3.761   2.343  -1.602  CL2  XL8  12  
XL8  C9   C9   C   0  1  N  N  N  18.631   -4.741   -7.214   2.750  -0.175  -0.301  C9   XL8  13  
XL8  O3   O3   O   0  1  N  N  N  18.811   -5.964   -7.955   2.209   0.405   0.887  O3   XL8  14  
XL8  C10  C10  C   0  1  Y  N  N  17.978   -7.033   -7.716   0.862   0.322   1.057  C10  XL8  15  
XL8  C11  C11  C   0  1  Y  N  N  16.701   -6.964   -7.175   0.253   0.860   2.185  C11  XL8  16  
XL8  N1   N1   N   0  1  Y  N  N  15.962   -8.065   -7.009  -1.060   0.762   2.317  N1   XL8  17  
XL8  C12  C12  C   0  1  Y  N  N  16.523   -9.241   -7.372  -1.791   0.161   1.391  C12  XL8  18  
XL8  N2   N2   N   0  1  Y  N  N  17.754   -9.380   -7.903  -1.245  -0.363   0.304  N2   XL8  19  
XL8  C13  C13  C   0  1  Y  N  N  18.463   -8.265   -8.085   0.061  -0.297   0.104  C13  XL8  20  
XL8  N3   N3   N   0  1  N  N  N  15.839  -10.399   -7.153  -3.165   0.077   1.563  N3   XL8  21  
XL8  C14  C14  C   0  1  Y  N  N  14.501  -10.536   -6.719  -3.969  -0.448   0.543  C14  XL8  22  
XL8  C15  C15  C   0  1  Y  N  N  13.519  -10.981   -7.619  -4.995   0.321  -0.005  C15  XL8  23  
XL8  C16  C16  C   0  1  Y  N  N  12.202  -11.072   -7.175  -5.787  -0.203  -1.015  C16  XL8  24  
XL8  C17  C17  C   0  1  Y  N  N  11.885  -10.680   -5.885  -5.558  -1.487  -1.477  C17  XL8  25  
XL8  C18  C18  C   0  1  Y  N  N  12.837  -10.190   -5.011  -4.540  -2.251  -0.934  C18  XL8  26  
XL8  C19  C19  C   0  1  Y  N  N  14.154  -10.135   -5.432  -3.742  -1.733   0.070  C19  XL8  27  
XL8  N4   N4   N   0  1  N  N  N  13.960  -11.433   -8.890  -5.225   1.621   0.465  N4   XL8  28  
XL8  C20  C20  C   0  1  N  N  N  13.295  -11.364  -10.065  -6.481   2.108   0.512  C20  XL8  29  
XL8  C21  C21  C   0  1  N  N  N  14.032  -11.945  -11.254  -6.742   3.463   1.118  C21  XL8  30  
XL8  C22  C22  C   0  1  N  N  N  15.464  -11.473  -11.402  -8.239   3.774   1.047  C22  XL8  31  
XL8  O4   O4   O   0  1  N  N  N  12.150  -10.955  -10.143  -7.402   1.455   0.067  O4   XL8  32  
XL8  CL3  CL3  CL  0  0  N  N  N  15.367   -9.589   -4.319  -2.461  -2.692   0.743  CL3  XL8  33  
XL8  CL4  CL4  CL  0  0  N  N  N  10.232  -10.746   -5.343  -6.551  -2.141  -2.742  CL4  XL8  34  
XL8  H1   H1   H   0  1  N  N  N  23.342   -2.101   -7.184   8.068   0.491  -0.349  H1   XL8  35  
XL8  H2   H2   H   0  1  N  N  N  25.217   -4.682   -5.296   8.977  -1.397  -0.298  H2   XL8  36  
XL8  H3   H3   H   0  1  N  N  N  24.556   -4.995   -6.937   8.888  -0.553   1.266  H3   XL8  37  
XL8  H4   H4   H   0  1  N  N  N  24.894   -3.311   -6.410   9.185  -2.307   1.217  H4   XL8  38  
XL8  H5   H5   H   0  1  N  N  N  22.617    0.513   -9.441   8.434   3.468  -1.941  H5   XL8  39  
XL8  H6   H6   H   0  1  N  N  N  22.878    0.046   -7.726   8.485   2.538  -0.424  H6   XL8  40  
XL8  H7   H7   H   0  1  N  N  N  23.515   -0.992   -9.046   8.575   1.694  -1.988  H7   XL8  41  
XL8  H8   H8   H   0  1  N  N  N  17.861   -4.127   -7.703   2.314   0.312  -1.174  H8   XL8  42  
XL8  H9   H9   H   0  1  N  N  N  18.314   -4.978   -6.188   2.516  -1.239  -0.325  H9   XL8  43  
XL8  H10  H10  H   0  1  N  N  N  16.299   -6.005   -6.884   0.843   1.352   2.944  H10  XL8  44  
XL8  H11  H11  H   0  1  N  N  N  19.443   -8.332   -8.534   0.501  -0.725  -0.785  H11  XL8  45  
XL8  H12  H12  H   0  1  N  N  N  16.341  -11.248   -7.318  -3.569   0.382   2.391  H12  XL8  46  
XL8  H13  H13  H   0  1  N  N  N  11.432  -11.446   -7.833  -6.582   0.390  -1.441  H13  XL8  47  
XL8  H14  H14  H   0  1  N  N  N  12.559   -9.858   -4.022  -4.366  -3.253  -1.298  H14  XL8  48  
XL8  H15  H15  H   0  1  N  N  N  14.868  -11.851   -8.920  -4.481   2.171   0.756  H15  XL8  49  
XL8  H16  H16  H   0  1  N  N  N  13.484  -11.668  -12.166  -6.420   3.463   2.160  H16  XL8  50  
XL8  H17  H17  H   0  1  N  N  N  14.041  -13.040  -11.150  -6.187   4.221   0.566  H17  XL8  51  
XL8  H18  H18  H   0  1  N  N  N  15.916  -11.944  -12.287  -8.794   3.015   1.599  H18  XL8  52  
XL8  H19  H19  H   0  1  N  N  N  15.479  -10.380  -11.521  -8.427   4.753   1.485  H19  XL8  53  
XL8  H20  H20  H   0  1  N  N  N  16.036  -11.752  -10.505  -8.561   3.773   0.005  H20  XL8  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XL8  C22  C21  SING  N  N   1  
XL8  C21  C20  SING  N  N   2  
XL8  O4   C20  DOUB  N  N   3  
XL8  C20  N4   SING  N  N   4  
XL8  CL2  C4   SING  N  N   5  
XL8  N4   C15  SING  N  N   6  
XL8  O2   C8   SING  N  N   7  
XL8  O2   C5   SING  N  N   8  
XL8  C13  N2   DOUB  Y  N   9  
XL8  C13  C10  SING  Y  N  10  
XL8  O3   C10  SING  N  N  11  
XL8  O3   C9   SING  N  N  12  
XL8  C5   C4   DOUB  Y  N  13  
XL8  C5   C6   SING  Y  N  14  
XL8  C4   C3   SING  Y  N  15  
XL8  N2   C12  SING  Y  N  16  
XL8  C10  C11  DOUB  Y  N  17  
XL8  C15  C16  DOUB  Y  N  18  
XL8  C15  C14  SING  Y  N  19  
XL8  C12  N3   SING  N  N  20  
XL8  C12  N1   DOUB  Y  N  21  
XL8  C9   C3   SING  N  N  22  
XL8  C11  N1   SING  Y  N  23  
XL8  C16  C17  SING  Y  N  24  
XL8  C6   C1   DOUB  Y  N  25  
XL8  C3   C2   DOUB  Y  N  26  
XL8  N3   C14  SING  N  N  27  
XL8  C14  C19  DOUB  Y  N  28  
XL8  C1   C2   SING  Y  N  29  
XL8  C1   O1   SING  N  N  30  
XL8  C2   CL1  SING  N  N  31  
XL8  C7   O1   SING  N  N  32  
XL8  C17  CL4  SING  N  N  33  
XL8  C17  C18  DOUB  Y  N  34  
XL8  C19  C18  SING  Y  N  35  
XL8  C19  CL3  SING  N  N  36  
XL8  C6   H1   SING  N  N  37  
XL8  C7   H2   SING  N  N  38  
XL8  C7   H3   SING  N  N  39  
XL8  C7   H4   SING  N  N  40  
XL8  C8   H5   SING  N  N  41  
XL8  C8   H6   SING  N  N  42  
XL8  C8   H7   SING  N  N  43  
XL8  C9   H8   SING  N  N  44  
XL8  C9   H9   SING  N  N  45  
XL8  C11  H10  SING  N  N  46  
XL8  C13  H11  SING  N  N  47  
XL8  N3   H12  SING  N  N  48  
XL8  C16  H13  SING  N  N  49  
XL8  C18  H14  SING  N  N  50  
XL8  N4   H15  SING  N  N  51  
XL8  C21  H16  SING  N  N  52  
XL8  C21  H17  SING  N  N  53  
XL8  C22  H18  SING  N  N  54  
XL8  C22  H19  SING  N  N  55  
XL8  C22  H20  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XL8  SMILES            ACDLabs               12.01  "c1(c(Cl)c(c(c(c1)OC)Cl)COc3cnc(Nc2c(cc(cc2NC(CC)=O)Cl)Cl)nc3)OC"  
XL8  InChI             InChI                 1.03   "InChI=1S/C22H20Cl4N4O4/c1-4-18(31)29-15-6-11(23)5-14(24)21(15)30-22-27-8-12(9-28-22)34-10-13-19(25)16(32-2)7-17(33-3)20(13)26/h5-9H,4,10H2,1-3H3,(H,29,31)(H,27,28,30)"  
XL8  InChIKey          InChI                 1.03   PKLZCNWCSPPNIU-UHFFFAOYSA-N  
XL8  SMILES_CANONICAL  CACTVS                3.385  "CCC(=O)Nc1cc(Cl)cc(Cl)c1Nc2ncc(OCc3c(Cl)c(OC)cc(OC)c3Cl)cn2"  
XL8  SMILES            CACTVS                3.385  "CCC(=O)Nc1cc(Cl)cc(Cl)c1Nc2ncc(OCc3c(Cl)c(OC)cc(OC)c3Cl)cn2"  
XL8  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCC(=O)Nc1cc(cc(c1Nc2ncc(cn2)OCc3c(c(cc(c3Cl)OC)OC)Cl)Cl)Cl"  
XL8  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC(=O)Nc1cc(cc(c1Nc2ncc(cn2)OCc3c(c(cc(c3Cl)OC)OC)Cl)Cl)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XL8  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[3,5-dichloro-2-({5-[(2,6-dichloro-3,5-dimethoxyphenyl)methoxy]pyrimidin-2-yl}amino)phenyl]propanamide"  
XL8  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-[2-[[5-[[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]methoxy]pyrimidin-2-yl]amino]-3,5-bis(chloranyl)phenyl]propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XL8  "Create component"  2017-11-05  RCSB  
XL8  "Initial release"   2019-07-10  RCSB  
##
